RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 SPHKAPQ2M3C7 1700 aa22■■□□□ 1.11
PCOLCE-204ENST00000468214 RIMS2Q9UQ26 1411 aa22■■□□□ 1.11
PCOLCE-204ENST00000468214 STRCP1A6NGW2 1772 aa21.99■■□□□ 1.11
PCOLCE-204ENST00000468214 SLC26A8Q96RN1 970 aa21.98■■□□□ 1.11
PCOLCE-204ENST00000468214 SENP3Q9H4L4 574 aaPredicted RBP21.98■■□□□ 1.11
PCOLCE-204ENST00000468214 ZFYVE9O95405 1425 aa21.97■■□□□ 1.11
PCOLCE-204ENST00000468214 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.96■■□□□ 1.11
PCOLCE-204ENST00000468214 TOM1O60784 492 aa21.95■■□□□ 1.1
PCOLCE-204ENST00000468214 SCAF1Q9H7N4 1312 aaKnown RBP21.95■■□□□ 1.1
PCOLCE-204ENST00000468214 ACIN1Q9UKV3 1341 aaKnown RBP21.95■■□□□ 1.1
PCOLCE-204ENST00000468214 LRRC7Q96NW7 1537 aa21.95■■□□□ 1.1
PCOLCE-204ENST00000468214 SLC4A1APQ9BWU0 796 aaKnown RBP21.94■■□□□ 1.1
PCOLCE-204ENST00000468214 PLEKHG1Q9ULL1 1385 aa21.94■■□□□ 1.1
PCOLCE-204ENST00000468214 ILDR2Q71H61 639 aa21.93■■□□□ 1.1
PCOLCE-204ENST00000468214 NUTM2DQ5VT03 806 aaPredicted RBP21.92■■□□□ 1.1
PCOLCE-204ENST00000468214 PIP4K2BP78356 416 aa21.91■■□□□ 1.1
PCOLCE-204ENST00000468214 TRPM2O94759 1503 aa21.9■■□□□ 1.1
PCOLCE-204ENST00000468214 KCNA6P17658 529 aa21.9■■□□□ 1.1
PCOLCE-204ENST00000468214 ZNF326Q5BKZ1 582 aaKnown RBP21.9■■□□□ 1.1
PCOLCE-204ENST00000468214 CLTCL1P53675 1640 aa21.88■■□□□ 1.09
PCOLCE-204ENST00000468214 HRCP23327 699 aa21.88■■□□□ 1.09
PCOLCE-204ENST00000468214 SOCS7O14512 581 aa21.87■■□□□ 1.09
PCOLCE-204ENST00000468214 KIF1BO60333 1816 aa21.87■■□□□ 1.09
PCOLCE-204ENST00000468214 PROSER2Q86WR7 435 aaPredicted RBP21.85■■□□□ 1.09
PCOLCE-204ENST00000468214 NKTRP30414 1462 aaKnown RBP21.83■■□□□ 1.09
PCOLCE-204ENST00000468214 MPHOSPH9Q99550 1183 aa21.83■■□□□ 1.09
PCOLCE-204ENST00000468214 PCGF6Q9BYE7 350 aa21.83■■□□□ 1.09
PCOLCE-204ENST00000468214 TBX22Q9Y458 520 aa21.83■■□□□ 1.09
PCOLCE-204ENST00000468214 TMEM94Q12767 1356 aa21.83■■□□□ 1.08
PCOLCE-204ENST00000468214 NWD1Q149M9 1564 aa21.82■■□□□ 1.08
PCOLCE-204ENST00000468214 DIP2AQ14689 1571 aa21.82■■□□□ 1.08
PCOLCE-204ENST00000468214 XIRP1Q702N8 1843 aaKnown RBP21.81■■□□□ 1.08
PCOLCE-204ENST00000468214 FOXD1Q16676 465 aa21.81■■□□□ 1.08
PCOLCE-204ENST00000468214 ADAMTS13Q76LX8 1427 aa21.8■■□□□ 1.08
PCOLCE-204ENST00000468214 CHD2O14647 1828 aaKnown RBP21.8■■□□□ 1.08
PCOLCE-204ENST00000468214 DISP3Q9P2K9 1392 aa21.79■■□□□ 1.08
PCOLCE-204ENST00000468214 RBM33Q96EV2 1170 aaKnown RBP21.79■■□□□ 1.08
PCOLCE-204ENST00000468214 ALKQ9UM73 1620 aa21.79■■□□□ 1.08
PCOLCE-204ENST00000468214 HSPA1LP34931 641 aa21.77■■□□□ 1.08
PCOLCE-204ENST00000468214 PIK3R4Q99570 1358 aa21.76■■□□□ 1.07
PCOLCE-204ENST00000468214 NEXMIFQ5QGS0 1516 aa21.76■■□□□ 1.07
PCOLCE-204ENST00000468214 CCDC144AA2RUR9 1427 aa21.75■■□□□ 1.07
PCOLCE-204ENST00000468214 SETBP1Q9Y6X0 1596 aa21.74■■□□□ 1.07
PCOLCE-204ENST00000468214 MSH6P52701 1360 aa21.74■■□□□ 1.07
PCOLCE-204ENST00000468214 NRXN3Q9Y4C0 1643 aa21.73■■□□□ 1.07
PCOLCE-204ENST00000468214 C14orf37Q86TY3 774 aa21.72■■□□□ 1.07
PCOLCE-204ENST00000468214 VGFO15240 615 aaPredicted RBP21.71■■□□□ 1.07
PCOLCE-204ENST00000468214 AMOTL2Q9Y2J4 779 aa21.71■■□□□ 1.07
PCOLCE-204ENST00000468214 RPGRIP1LQ68CZ1 1315 aa21.71■■□□□ 1.07
PCOLCE-204ENST00000468214 PTPRUQ92729 1446 aa21.67■■□□□ 1.06
PCOLCE-204ENST00000468214 METP08581 1390 aa21.66■■□□□ 1.06
PCOLCE-204ENST00000468214 RGL3Q3MIN7 710 aa21.66■■□□□ 1.06
PCOLCE-204ENST00000468214 NCOA3Q9Y6Q9 1424 aa21.65■■□□□ 1.06
PCOLCE-204ENST00000468214 PPLO60437 1756 aa21.65■■□□□ 1.06
PCOLCE-204ENST00000468214 DHX57Q6P158 1386 aaKnown RBP21.64■■□□□ 1.06
PCOLCE-204ENST00000468214 ANKRD30BQ9BXX2 1392 aa21.64■■□□□ 1.06
PCOLCE-204ENST00000468214 IFT172Q9UG01 1749 aa21.64■■□□□ 1.06
PCOLCE-204ENST00000468214 FAM135BQ49AJ0 1406 aa21.63■■□□□ 1.05
PCOLCE-204ENST00000468214 XRN1Q8IZH2 1706 aaKnown RBP21.63■■□□□ 1.05
PCOLCE-204ENST00000468214 SPATA31E1Q6ZUB1 1445 aa21.62■■□□□ 1.05
PCOLCE-204ENST00000468214 SLAIN2Q9P270 581 aa21.61■■□□□ 1.05
PCOLCE-204ENST00000468214 ROBO1Q9Y6N7 1651 aa21.6■■□□□ 1.05
PCOLCE-204ENST00000468214 ATF3P18847 181 aa21.6■■□□□ 1.05
PCOLCE-204ENST00000468214 C19orf44Q9H6X5 657 aa21.6■■□□□ 1.05
PCOLCE-204ENST00000468214 CADPS2Q86UW7 1296 aa21.59■■□□□ 1.05
PCOLCE-204ENST00000468214 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.58■■□□□ 1.05
PCOLCE-204ENST00000468214 ADGRF5Q8IZF2 1346 aa21.56■■□□□ 1.04
PCOLCE-204ENST00000468214 SETD1AO15047 1707 aaKnown RBP21.56■■□□□ 1.04
PCOLCE-204ENST00000468214 MED1Q15648 1581 aaPredicted RBP21.54■■□□□ 1.04
PCOLCE-204ENST00000468214 DCCP43146 1447 aa21.53■■□□□ 1.04
PCOLCE-204ENST00000468214 PTCH1Q13635 1447 aa21.52■■□□□ 1.04
PCOLCE-204ENST00000468214 ADGRL3Q9HAR2 1447 aa21.51■■□□□ 1.03
PCOLCE-204ENST00000468214 ROBO2Q9HCK4 1378 aa21.49■■□□□ 1.03
PCOLCE-204ENST00000468214 PIK3C2GO75747 1445 aa21.48■■□□□ 1.03
PCOLCE-204ENST00000468214 PHLPP1O60346 1717 aa21.48■■□□□ 1.03
PCOLCE-204ENST00000468214 NALCNQ8IZF0 1738 aa21.47■■□□□ 1.03
PCOLCE-204ENST00000468214 PHF23Q9BUL5 403 aaPredicted RBP21.47■■□□□ 1.03
PCOLCE-204ENST00000468214 STK26Q9P289 416 aa21.46■■□□□ 1.03
PCOLCE-204ENST00000468214 PRAG1Q86YV5 1406 aa21.46■■□□□ 1.03
PCOLCE-204ENST00000468214 MYOM2P54296 1465 aa21.45■■□□□ 1.02
PCOLCE-204ENST00000468214 TMEM132EQ6IEE7 984 aa21.44■■□□□ 1.02
PCOLCE-204ENST00000468214 MST1RQ04912 1400 aa21.44■■□□□ 1.02
PCOLCE-204ENST00000468214 BRINP3Q76B58 766 aa21.43■■□□□ 1.02
PCOLCE-204ENST00000468214 LRPPRCP42704 1394 aaKnown RBP21.43■■□□□ 1.02
PCOLCE-204ENST00000468214 SIN3AQ96ST3 1273 aa21.42■■□□□ 1.02
PCOLCE-204ENST00000468214 ASXL1Q8IXJ9 1541 aa21.41■■□□□ 1.02
PCOLCE-204ENST00000468214 NRXN1Q9ULB1 1477 aa21.4■■□□□ 1.02
PCOLCE-204ENST00000468214 JCADQ9P266 1359 aa21.4■■□□□ 1.02
PCOLCE-204ENST00000468214 C14orf93Q9H972 538 aaKnown RBP21.4■■□□□ 1.02
PCOLCE-204ENST00000468214 LAMC1P11047 1609 aa21.4■■□□□ 1.02
PCOLCE-204ENST00000468214 COL16A1Q07092 1604 aaPredicted RBP21.4■■□□□ 1.02
PCOLCE-204ENST00000468214 AHDC1Q5TGY3 1603 aaPredicted RBP21.4■■□□□ 1.02
PCOLCE-204ENST00000468214 NEUROD1Q13562 356 aa21.39■■□□□ 1.01
PCOLCE-204ENST00000468214 CFAP70Q5T0N1 1121 aa21.39■■□□□ 1.01
PCOLCE-204ENST00000468214 KDM2AQ9Y2K7 1162 aa21.39■■□□□ 1.01
PCOLCE-204ENST00000468214 TECPR2O15040 1411 aa21.38■■□□□ 1.01
PCOLCE-204ENST00000468214 YTHDC2Q9H6S0 1430 aaKnown RBP21.38■■□□□ 1.01
PCOLCE-204ENST00000468214 ABCC11Q96J66 1382 aa21.38■■□□□ 1.01
PCOLCE-204ENST00000468214 DCAF11Q8TEB1 546 aa21.38■■□□□ 1.01
PCOLCE-204ENST00000468214 KNDC1Q76NI1 1749 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms