RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 ZNF335Q9H4Z2 1342 aaPredicted RBP19.24■□□□□ 0.67
PDCD11-202ENST00000466959 NCKAP5LQ9HCH0 1330 aa19.21■□□□□ 0.67
PDCD11-202ENST00000466959 IFT172Q9UG01 1749 aa19.2■□□□□ 0.66
PDCD11-202ENST00000466959 CHGAP10645 457 aaKnown RBP19.2■□□□□ 0.66
PDCD11-202ENST00000466959 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
PDCD11-202ENST00000466959 TONSLQ96HA7 1378 aa19.19■□□□□ 0.66
PDCD11-202ENST00000466959 STAG3Q9UJ98 1225 aa19.18■□□□□ 0.66
PDCD11-202ENST00000466959 PPLO60437 1756 aa19.18■□□□□ 0.66
PDCD11-202ENST00000466959 TIMELESSQ9UNS1 1208 aa19.16■□□□□ 0.66
PDCD11-202ENST00000466959 NEXMIFQ5QGS0 1516 aa19.15■□□□□ 0.66
PDCD11-202ENST00000466959 RGL3Q3MIN7 710 aa19.15■□□□□ 0.66
PDCD11-202ENST00000466959 ZNF326Q5BKZ1 582 aaKnown RBP19.14■□□□□ 0.65
PDCD11-202ENST00000466959 RPGRIP1LQ68CZ1 1315 aa19.14■□□□□ 0.65
PDCD11-202ENST00000466959 SLIT1O75093 1534 aa19.14■□□□□ 0.65
PDCD11-202ENST00000466959 ARHGAP23Q9P227 1491 aa19.13■□□□□ 0.65
PDCD11-202ENST00000466959 THEMISQ8N1K5 641 aaPredicted RBP19.12■□□□□ 0.65
PDCD11-202ENST00000466959 L3MBTL2Q969R5 705 aa19.12■□□□□ 0.65
PDCD11-202ENST00000466959 MYOM2P54296 1465 aa19.11■□□□□ 0.65
PDCD11-202ENST00000466959 ZFYVE9O95405 1425 aa19.11■□□□□ 0.65
PDCD11-202ENST00000466959 RIMS2Q9UQ26 1411 aa19.11■□□□□ 0.65
PDCD11-202ENST00000466959 TMEM2Q9UHN6 1383 aa19.11■□□□□ 0.65
PDCD11-202ENST00000466959 TOM1O60784 492 aa19.11■□□□□ 0.65
PDCD11-202ENST00000466959 PIP4K2BP78356 416 aa19.11■□□□□ 0.65
PDCD11-202ENST00000466959 PHF23Q9BUL5 403 aaPredicted RBP19.11■□□□□ 0.65
PDCD11-202ENST00000466959 HSPA1LP34931 641 aa19.09■□□□□ 0.65
PDCD11-202ENST00000466959 MED1Q15648 1581 aaPredicted RBP19.09■□□□□ 0.65
PDCD11-202ENST00000466959 DCAF11Q8TEB1 546 aa19.08■□□□□ 0.64
PDCD11-202ENST00000466959 STAC3Q96MF2 364 aa19.08■□□□□ 0.64
PDCD11-202ENST00000466959 ZEB1P37275 1124 aaPredicted RBP19.07■□□□□ 0.64
PDCD11-202ENST00000466959 POLR1AO95602 1720 aaPredicted RBP19.07■□□□□ 0.64
PDCD11-202ENST00000466959 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.06■□□□□ 0.64
PDCD11-202ENST00000466959 NRXN1Q9ULB1 1477 aa19.05■□□□□ 0.64
PDCD11-202ENST00000466959 HDGFP51858 240 aaKnown RBP19.05■□□□□ 0.64
PDCD11-202ENST00000466959 SCAF11Q99590 1463 aaKnown RBP19.04■□□□□ 0.64
PDCD11-202ENST00000466959 VGFO15240 615 aaPredicted RBP19.04■□□□□ 0.64
PDCD11-202ENST00000466959 KDM2AQ9Y2K7 1162 aa19.04■□□□□ 0.64
PDCD11-202ENST00000466959 CPS1P31327 1500 aa19.04■□□□□ 0.64
PDCD11-202ENST00000466959 PRAG1Q86YV5 1406 aa19.03■□□□□ 0.64
PDCD11-202ENST00000466959 EID1Q9Y6B2 187 aa19.03■□□□□ 0.64
PDCD11-202ENST00000466959 PPP1R15AO75807 674 aaPredicted RBP19.02■□□□□ 0.64
PDCD11-202ENST00000466959 ADGRF5Q8IZF2 1346 aa19.01■□□□□ 0.63
PDCD11-202ENST00000466959 LTKP29376 864 aa19.01■□□□□ 0.63
PDCD11-202ENST00000466959 NUTM2DQ5VT03 806 aaPredicted RBP19.01■□□□□ 0.63
PDCD11-202ENST00000466959 TXNDC2Q86VQ3 553 aa19.01■□□□□ 0.63
PDCD11-202ENST00000466959 PIK3C2GO75747 1445 aa19■□□□□ 0.63
PDCD11-202ENST00000466959 LAMC1P11047 1609 aa19■□□□□ 0.63
PDCD11-202ENST00000466959 KIAA1210Q9ULL0 1709 aa19■□□□□ 0.63
PDCD11-202ENST00000466959 ANKLE2Q86XL3 938 aa19■□□□□ 0.63
PDCD11-202ENST00000466959 SETBP1Q9Y6X0 1596 aa19■□□□□ 0.63
PDCD11-202ENST00000466959 IQGAP1P46940 1657 aa19■□□□□ 0.63
PDCD11-202ENST00000466959 TRPM1Q7Z4N2 1603 aa19■□□□□ 0.63
PDCD11-202ENST00000466959 NRXN3Q9Y4C0 1643 aa19■□□□□ 0.63
PDCD11-202ENST00000466959 PLEKHG1Q9ULL1 1385 aa18.99■□□□□ 0.63
PDCD11-202ENST00000466959 MED14O60244 1454 aa18.97■□□□□ 0.63
PDCD11-202ENST00000466959 NBPF8Q3BBV2 869 aa18.96■□□□□ 0.63
PDCD11-202ENST00000466959 SETD1AO15047 1707 aaKnown RBP18.96■□□□□ 0.63
PDCD11-202ENST00000466959 DIP2AQ14689 1571 aa18.95■□□□□ 0.62
PDCD11-202ENST00000466959 ALKQ9UM73 1620 aa18.95■□□□□ 0.62
PDCD11-202ENST00000466959 RALGAPBQ86X10 1494 aa18.95■□□□□ 0.62
PDCD11-202ENST00000466959 NPHP4O75161 1426 aaPredicted RBP18.93■□□□□ 0.62
PDCD11-202ENST00000466959 ADAMTS13Q76LX8 1427 aa18.92■□□□□ 0.62
PDCD11-202ENST00000466959 C14orf93Q9H972 538 aaKnown RBP18.91■□□□□ 0.62
PDCD11-202ENST00000466959 CFAP70Q5T0N1 1121 aa18.9■□□□□ 0.62
PDCD11-202ENST00000466959 BCANQ96GW7 911 aa18.9■□□□□ 0.62
PDCD11-202ENST00000466959 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
PDCD11-202ENST00000466959 ASXL1Q8IXJ9 1541 aa18.89■□□□□ 0.61
PDCD11-202ENST00000466959 ADGRB1O14514 1584 aa18.89■□□□□ 0.61
PDCD11-202ENST00000466959 ROCK2O75116 1388 aaKnown RBP18.87■□□□□ 0.61
PDCD11-202ENST00000466959 GPRASP1Q5JY77 1395 aa18.87■□□□□ 0.61
PDCD11-202ENST00000466959 TBX22Q9Y458 520 aa18.86■□□□□ 0.61
PDCD11-202ENST00000466959 NBPF1Q3BBV0 1214 aa18.85■□□□□ 0.61
PDCD11-202ENST00000466959 SLC26A8Q96RN1 970 aa18.85■□□□□ 0.61
PDCD11-202ENST00000466959 KNDC1Q76NI1 1749 aa18.83■□□□□ 0.61
PDCD11-202ENST00000466959 METP08581 1390 aa18.83■□□□□ 0.61
PDCD11-202ENST00000466959 CHD2O14647 1828 aaKnown RBP18.83■□□□□ 0.6
PDCD11-202ENST00000466959 PIK3R4Q99570 1358 aa18.82■□□□□ 0.6
PDCD11-202ENST00000466959 TMEM132EQ6IEE7 984 aa18.81■□□□□ 0.6
PDCD11-202ENST00000466959 CARD11Q9BXL7 1154 aa18.81■□□□□ 0.6
PDCD11-202ENST00000466959 YTHDC2Q9H6S0 1430 aaKnown RBP18.81■□□□□ 0.6
PDCD11-202ENST00000466959 XRN1Q8IZH2 1706 aaKnown RBP18.8■□□□□ 0.6
PDCD11-202ENST00000466959 LRPPRCP42704 1394 aaKnown RBP18.8■□□□□ 0.6
PDCD11-202ENST00000466959 NWD1Q149M9 1564 aa18.79■□□□□ 0.6
PDCD11-202ENST00000466959 ARHGEF28Q8N1W1 1705 aaKnown RBP18.79■□□□□ 0.6
PDCD11-202ENST00000466959 PTPRUQ92729 1446 aa18.78■□□□□ 0.6
PDCD11-202ENST00000466959 DLC1Q96QB1 1528 aa18.77■□□□□ 0.6
PDCD11-202ENST00000466959 TECPR2O15040 1411 aa18.76■□□□□ 0.59
PDCD11-202ENST00000466959 ABCC11Q96J66 1382 aa18.76■□□□□ 0.59
PDCD11-202ENST00000466959 LRRC7Q96NW7 1537 aa18.75■□□□□ 0.59
PDCD11-202ENST00000466959 USP47Q96K76 1375 aa18.75■□□□□ 0.59
PDCD11-202ENST00000466959 STRCP1A6NGW2 1772 aa18.74■□□□□ 0.59
PDCD11-202ENST00000466959 STK26Q9P289 416 aa18.74■□□□□ 0.59
PDCD11-202ENST00000466959 EIF3AQ14152 1382 aaKnown RBP18.73■□□□□ 0.59
PDCD11-202ENST00000466959 PTCH1Q13635 1447 aa18.73■□□□□ 0.59
PDCD11-202ENST00000466959 KCNA6P17658 529 aa18.72■□□□□ 0.59
PDCD11-202ENST00000466959 TRAK1Q9UPV9 953 aa18.72■□□□□ 0.59
PDCD11-202ENST00000466959 AMOTL2Q9Y2J4 779 aa18.72■□□□□ 0.59
PDCD11-202ENST00000466959 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
PDCD11-202ENST00000466959 QRICH2Q9H0J4 1663 aa18.71■□□□□ 0.59
PDCD11-202ENST00000466959 EIF4G2P78344 907 aaKnown RBP eCLIP18.71■□□□□ 0.59
PDCD11-202ENST00000466959 FAM135BQ49AJ0 1406 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms