RNA–Protein interactions for RNA: ENST00000466901.5

COPS7B-218, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-218ENST00000466901 RAB3GAP2Q9H2M9 1393 aa11.61□□□□□ -0.55
COPS7B-218ENST00000466901 RIMS2Q9UQ26 1411 aa11.6□□□□□ -0.55
COPS7B-218ENST00000466901 TRPM2O94759 1503 aa11.6□□□□□ -0.55
COPS7B-218ENST00000466901 FOXD1Q16676 465 aa11.6□□□□□ -0.55
COPS7B-218ENST00000466901 ZNF326Q5BKZ1 582 aaKnown RBP11.59□□□□□ -0.55
COPS7B-218ENST00000466901 ZFYVE9O95405 1425 aa11.59□□□□□ -0.55
COPS7B-218ENST00000466901 KIF1BO60333 1816 aa11.58□□□□□ -0.56
COPS7B-218ENST00000466901 CLTCL1P53675 1640 aa11.58□□□□□ -0.56
COPS7B-218ENST00000466901 HRCP23327 699 aa11.58□□□□□ -0.56
COPS7B-218ENST00000466901 NUTM2DQ5VT03 806 aaPredicted RBP11.58□□□□□ -0.56
COPS7B-218ENST00000466901 CPS1P31327 1500 aa11.57□□□□□ -0.56
COPS7B-218ENST00000466901 SLC26A8Q96RN1 970 aa11.57□□□□□ -0.56
COPS7B-218ENST00000466901 SENP3Q9H4L4 574 aaPredicted RBP11.57□□□□□ -0.56
COPS7B-218ENST00000466901 IQSEC2Q5JU85 1478 aa11.57□□□□□ -0.56
COPS7B-218ENST00000466901 PLEKHG1Q9ULL1 1385 aa11.56□□□□□ -0.56
COPS7B-218ENST00000466901 CCDC144AA2RUR9 1427 aa11.55□□□□□ -0.56
COPS7B-218ENST00000466901 STRCP1A6NGW2 1772 aa11.54□□□□□ -0.56
COPS7B-218ENST00000466901 KCNA6P17658 529 aa11.53□□□□□ -0.56
COPS7B-218ENST00000466901 TBX22Q9Y458 520 aa11.53□□□□□ -0.56
COPS7B-218ENST00000466901 RPGRIP1LQ68CZ1 1315 aa11.53□□□□□ -0.56
COPS7B-218ENST00000466901 UBAP1LF5GYI3 381 aa11.52□□□□□ -0.57
COPS7B-218ENST00000466901 VGFO15240 615 aaPredicted RBP11.51□□□□□ -0.57
COPS7B-218ENST00000466901 NEXMIFQ5QGS0 1516 aa11.5□□□□□ -0.57
COPS7B-218ENST00000466901 LRRC7Q96NW7 1537 aa11.5□□□□□ -0.57
COPS7B-218ENST00000466901 RGL3Q3MIN7 710 aa11.5□□□□□ -0.57
COPS7B-218ENST00000466901 ADAMTS13Q76LX8 1427 aa11.5□□□□□ -0.57
COPS7B-218ENST00000466901 DIP2AQ14689 1571 aa11.5□□□□□ -0.57
COPS7B-218ENST00000466901 CHD2O14647 1828 aaKnown RBP11.49□□□□□ -0.57
COPS7B-218ENST00000466901 TOM1O60784 492 aa11.49□□□□□ -0.57
COPS7B-218ENST00000466901 PROSER2Q86WR7 435 aaPredicted RBP11.49□□□□□ -0.57
COPS7B-218ENST00000466901 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
COPS7B-218ENST00000466901 PIK3R4Q99570 1358 aa11.48□□□□□ -0.57
COPS7B-218ENST00000466901 PPLO60437 1756 aa11.47□□□□□ -0.57
COPS7B-218ENST00000466901 SETBP1Q9Y6X0 1596 aa11.47□□□□□ -0.57
COPS7B-218ENST00000466901 SPATA31E1Q6ZUB1 1445 aa11.47□□□□□ -0.57
COPS7B-218ENST00000466901 ANKRD30BQ9BXX2 1392 aa11.47□□□□□ -0.57
COPS7B-218ENST00000466901 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.57
COPS7B-218ENST00000466901 NWD1Q149M9 1564 aa11.46□□□□□ -0.57
COPS7B-218ENST00000466901 NKTRP30414 1462 aaKnown RBP11.46□□□□□ -0.57
COPS7B-218ENST00000466901 TMEM94Q12767 1356 aa11.46□□□□□ -0.57
COPS7B-218ENST00000466901 AMOTL2Q9Y2J4 779 aa11.46□□□□□ -0.57
COPS7B-218ENST00000466901 SCAF1Q9H7N4 1312 aaKnown RBP11.45□□□□□ -0.58
COPS7B-218ENST00000466901 XIRP1Q702N8 1843 aaKnown RBP11.45□□□□□ -0.58
COPS7B-218ENST00000466901 PIP4K2BP78356 416 aa11.45□□□□□ -0.58
COPS7B-218ENST00000466901 RBM33Q96EV2 1170 aaKnown RBP11.45□□□□□ -0.58
COPS7B-218ENST00000466901 METP08581 1390 aa11.43□□□□□ -0.58
COPS7B-218ENST00000466901 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
COPS7B-218ENST00000466901 ADGRF5Q8IZF2 1346 aa11.42□□□□□ -0.58
COPS7B-218ENST00000466901 C14orf37Q86TY3 774 aa11.42□□□□□ -0.58
COPS7B-218ENST00000466901 IFT172Q9UG01 1749 aa11.42□□□□□ -0.58
COPS7B-218ENST00000466901 ALKQ9UM73 1620 aa11.42□□□□□ -0.58
COPS7B-218ENST00000466901 MSH6P52701 1360 aa11.41□□□□□ -0.58
COPS7B-218ENST00000466901 NCOA3Q9Y6Q9 1424 aa11.41□□□□□ -0.58
COPS7B-218ENST00000466901 SETD1AO15047 1707 aaKnown RBP11.39□□□□□ -0.59
COPS7B-218ENST00000466901 XRN1Q8IZH2 1706 aaKnown RBP11.39□□□□□ -0.59
COPS7B-218ENST00000466901 DCAF11Q8TEB1 546 aa11.39□□□□□ -0.59
COPS7B-218ENST00000466901 C19orf44Q9H6X5 657 aa11.39□□□□□ -0.59
COPS7B-218ENST00000466901 PIK3C2GO75747 1445 aa11.38□□□□□ -0.59
COPS7B-218ENST00000466901 STAC3Q96MF2 364 aa11.38□□□□□ -0.59
COPS7B-218ENST00000466901 KDM2AQ9Y2K7 1162 aa11.38□□□□□ -0.59
COPS7B-218ENST00000466901 MYOM2P54296 1465 aa11.38□□□□□ -0.59
COPS7B-218ENST00000466901 ATF3P18847 181 aa11.37□□□□□ -0.59
COPS7B-218ENST00000466901 CADPS2Q86UW7 1296 aa11.37□□□□□ -0.59
COPS7B-218ENST00000466901 SLAIN2Q9P270 581 aa11.37□□□□□ -0.59
COPS7B-218ENST00000466901 HSPA1LP34931 641 aa11.36□□□□□ -0.59
COPS7B-218ENST00000466901 C14orf93Q9H972 538 aaKnown RBP11.36□□□□□ -0.59
COPS7B-218ENST00000466901 NRXN1Q9ULB1 1477 aa11.36□□□□□ -0.59
COPS7B-218ENST00000466901 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.35□□□□□ -0.59
COPS7B-218ENST00000466901 CFAP70Q5T0N1 1121 aa11.35□□□□□ -0.59
COPS7B-218ENST00000466901 TMEM132EQ6IEE7 984 aa11.35□□□□□ -0.59
COPS7B-218ENST00000466901 STK26Q9P289 416 aa11.35□□□□□ -0.59
COPS7B-218ENST00000466901 PTCH1Q13635 1447 aa11.35□□□□□ -0.59
COPS7B-218ENST00000466901 FAM135BQ49AJ0 1406 aa11.35□□□□□ -0.59
COPS7B-218ENST00000466901 ROBO2Q9HCK4 1378 aa11.34□□□□□ -0.59
COPS7B-218ENST00000466901 LRPPRCP42704 1394 aaKnown RBP11.33□□□□□ -0.6
COPS7B-218ENST00000466901 DHX57Q6P158 1386 aaKnown RBP11.33□□□□□ -0.6
COPS7B-218ENST00000466901 LAMC1P11047 1609 aa11.33□□□□□ -0.6
COPS7B-218ENST00000466901 PRAG1Q86YV5 1406 aa11.33□□□□□ -0.6
COPS7B-218ENST00000466901 ABCC11Q96J66 1382 aa11.32□□□□□ -0.6
COPS7B-218ENST00000466901 NEUROD1Q13562 356 aa11.32□□□□□ -0.6
COPS7B-218ENST00000466901 SIN3AQ96ST3 1273 aa11.32□□□□□ -0.6
COPS7B-218ENST00000466901 ROBO1Q9Y6N7 1651 aa11.32□□□□□ -0.6
COPS7B-218ENST00000466901 DCCP43146 1447 aa11.32□□□□□ -0.6
COPS7B-218ENST00000466901 YTHDC2Q9H6S0 1430 aaKnown RBP11.32□□□□□ -0.6
COPS7B-218ENST00000466901 ADGRL3Q9HAR2 1447 aa11.32□□□□□ -0.6
COPS7B-218ENST00000466901 TECPR2O15040 1411 aa11.31□□□□□ -0.6
COPS7B-218ENST00000466901 ASXL1Q8IXJ9 1541 aa11.3□□□□□ -0.6
COPS7B-218ENST00000466901 NALCNQ8IZF0 1738 aa11.3□□□□□ -0.6
COPS7B-218ENST00000466901 WAPLQ7Z5K2 1190 aa11.3□□□□□ -0.6
COPS7B-218ENST00000466901 KNDC1Q76NI1 1749 aa11.29□□□□□ -0.6
COPS7B-218ENST00000466901 L3MBTL2Q969R5 705 aa11.29□□□□□ -0.6
COPS7B-218ENST00000466901 SIRT1Q96EB6 747 aa11.29□□□□□ -0.6
COPS7B-218ENST00000466901 PCGF6Q9BYE7 350 aa11.29□□□□□ -0.6
COPS7B-218ENST00000466901 MST1RQ04912 1400 aa11.27□□□□□ -0.6
COPS7B-218ENST00000466901 BRINP3Q76B58 766 aa11.27□□□□□ -0.61
COPS7B-218ENST00000466901 POGKQ9P215 609 aa11.27□□□□□ -0.61
COPS7B-218ENST00000466901 TRAK1Q9UPV9 953 aa11.27□□□□□ -0.61
COPS7B-218ENST00000466901 PLEKHH1Q9ULM0 1364 aa11.27□□□□□ -0.61
COPS7B-218ENST00000466901 ADGRB1O14514 1584 aa11.26□□□□□ -0.61
COPS7B-218ENST00000466901 PRAM1Q96QH2 718 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms