RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 E9PCH4 1651 aa26.64■■□□□ 1.86
CYTH3-205ENST00000466543 KCNA6P17658 529 aa26.64■■□□□ 1.86
CYTH3-205ENST00000466543 NWD1Q149M9 1564 aa26.63■■□□□ 1.85
CYTH3-205ENST00000466543 ROCK1Q13464 1354 aa26.6■■□□□ 1.85
CYTH3-205ENST00000466543 IQGAP3Q86VI3 1631 aa26.59■■□□□ 1.85
CYTH3-205ENST00000466543 RIMS2Q9UQ26 1411 aa26.58■■□□□ 1.85
CYTH3-205ENST00000466543 PPARGC1BQ86YN6 1023 aaKnown RBP26.58■■□□□ 1.85
CYTH3-205ENST00000466543 PROSER2Q86WR7 435 aaPredicted RBP26.57■■□□□ 1.84
CYTH3-205ENST00000466543 FAM135BQ49AJ0 1406 aa26.56■■□□□ 1.84
CYTH3-205ENST00000466543 NKTRP30414 1462 aaKnown RBP26.56■■□□□ 1.84
CYTH3-205ENST00000466543 PLEKHG1Q9ULL1 1385 aa26.56■■□□□ 1.84
CYTH3-205ENST00000466543 CHD2O14647 1828 aaKnown RBP26.55■■□□□ 1.84
CYTH3-205ENST00000466543 BCANQ96GW7 911 aa26.54■■□□□ 1.84
CYTH3-205ENST00000466543 ROBO1Q9Y6N7 1651 aa26.54■■□□□ 1.84
CYTH3-205ENST00000466543 ITGAEP38570 1179 aa26.53■■□□□ 1.84
CYTH3-205ENST00000466543 PHF23Q9BUL5 403 aaPredicted RBP26.53■■□□□ 1.84
CYTH3-205ENST00000466543 NUTM2DQ5VT03 806 aaPredicted RBP26.5■■□□□ 1.83
CYTH3-205ENST00000466543 NUP155O75694 1391 aa26.49■■□□□ 1.83
CYTH3-205ENST00000466543 CHGAP10645 457 aaKnown RBP26.49■■□□□ 1.83
CYTH3-205ENST00000466543 ADAMTS13Q76LX8 1427 aa26.48■■□□□ 1.83
CYTH3-205ENST00000466543 PPP1R15AO75807 674 aaPredicted RBP26.48■■□□□ 1.83
CYTH3-205ENST00000466543 RGS17Q9UGC6 210 aaPredicted RBP26.48■■□□□ 1.83
CYTH3-205ENST00000466543 TBX22Q9Y458 520 aa26.44■■□□□ 1.82
CYTH3-205ENST00000466543 MSH6P52701 1360 aa26.44■■□□□ 1.82
CYTH3-205ENST00000466543 HDGFP51858 240 aaKnown RBP26.41■■□□□ 1.82
CYTH3-205ENST00000466543 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.41■■□□□ 1.82
CYTH3-205ENST00000466543 DIP2AQ14689 1571 aa26.39■■□□□ 1.82
CYTH3-205ENST00000466543 SLAIN2Q9P270 581 aa26.39■■□□□ 1.82
CYTH3-205ENST00000466543 SPHKAPQ2M3C7 1700 aa26.39■■□□□ 1.81
CYTH3-205ENST00000466543 PHLPP1O60346 1717 aa26.36■■□□□ 1.81
CYTH3-205ENST00000466543 NRXN3Q9Y4C0 1643 aa26.36■■□□□ 1.81
CYTH3-205ENST00000466543 PTPRUQ92729 1446 aa26.36■■□□□ 1.81
CYTH3-205ENST00000466543 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.34■■□□□ 1.81
CYTH3-205ENST00000466543 PIK3R4Q99570 1358 aa26.33■■□□□ 1.8
CYTH3-205ENST00000466543 NCOA3Q9Y6Q9 1424 aa26.32■■□□□ 1.8
CYTH3-205ENST00000466543 TRPM2O94759 1503 aa26.32■■□□□ 1.8
CYTH3-205ENST00000466543 COL16A1Q07092 1604 aaPredicted RBP26.32■■□□□ 1.8
CYTH3-205ENST00000466543 RRBP1Q9P2E9 1410 aaKnown RBP26.31■■□□□ 1.8
CYTH3-205ENST00000466543 CLTCL1P53675 1640 aa26.29■■□□□ 1.8
CYTH3-205ENST00000466543 POTEAQ6S8J7 498 aa26.29■■□□□ 1.8
CYTH3-205ENST00000466543 SETBP1Q9Y6X0 1596 aa26.29■■□□□ 1.8
CYTH3-205ENST00000466543 AMOTL2Q9Y2J4 779 aa26.28■■□□□ 1.8
CYTH3-205ENST00000466543 NAIPQ13075 1403 aa26.28■■□□□ 1.8
CYTH3-205ENST00000466543 XRN1Q8IZH2 1706 aaKnown RBP26.28■■□□□ 1.8
CYTH3-205ENST00000466543 C14orf37Q86TY3 774 aa26.27■■□□□ 1.8
CYTH3-205ENST00000466543 C19orf44Q9H6X5 657 aa26.25■■□□□ 1.79
CYTH3-205ENST00000466543 JCADQ9P266 1359 aa26.24■■□□□ 1.79
CYTH3-205ENST00000466543 NEXMIFQ5QGS0 1516 aa26.24■■□□□ 1.79
CYTH3-205ENST00000466543 METP08581 1390 aa26.22■■□□□ 1.79
CYTH3-205ENST00000466543 AHDC1Q5TGY3 1603 aaPredicted RBP26.21■■□□□ 1.79
CYTH3-205ENST00000466543 ZNF326Q5BKZ1 582 aaKnown RBP26.21■■□□□ 1.79
CYTH3-205ENST00000466543 CADPS2Q86UW7 1296 aa26.21■■□□□ 1.79
CYTH3-205ENST00000466543 ATF3P18847 181 aa26.2■■□□□ 1.78
CYTH3-205ENST00000466543 LRP6O75581 1613 aa26.2■■□□□ 1.78
CYTH3-205ENST00000466543 KIF1BO60333 1816 aa26.17■■□□□ 1.78
CYTH3-205ENST00000466543 BRINP3Q76B58 766 aa26.16■■□□□ 1.78
CYTH3-205ENST00000466543 SHPRHQ149N8 1683 aa26.14■■□□□ 1.78
CYTH3-205ENST00000466543 DCCP43146 1447 aa26.14■■□□□ 1.77
CYTH3-205ENST00000466543 SETD1AO15047 1707 aaKnown RBP26.13■■□□□ 1.77
CYTH3-205ENST00000466543 HFM1A2PYH4 1435 aa26.13■■□□□ 1.77
CYTH3-205ENST00000466543 MST1RQ04912 1400 aa26.13■■□□□ 1.77
CYTH3-205ENST00000466543 ASXL1Q8IXJ9 1541 aa26.12■■□□□ 1.77
CYTH3-205ENST00000466543 NALCNQ8IZF0 1738 aa26.11■■□□□ 1.77
CYTH3-205ENST00000466543 SPATA31A6Q5VVP1 1343 aa26.09■■□□□ 1.77
CYTH3-205ENST00000466543 NHSL1Q5SYE7 1610 aa26.08■■□□□ 1.77
CYTH3-205ENST00000466543 TRIM52Q96A61 297 aa26.08■■□□□ 1.77
CYTH3-205ENST00000466543 ADGRL3Q9HAR2 1447 aa26.07■■□□□ 1.76
CYTH3-205ENST00000466543 DDX17Q92841 729 aaKnown RBP26.03■■□□□ 1.76
CYTH3-205ENST00000466543 SLC4A1APQ9BWU0 796 aaKnown RBP26.03■■□□□ 1.76
CYTH3-205ENST00000466543 PPLO60437 1756 aa26.02■■□□□ 1.76
CYTH3-205ENST00000466543 FOXD1Q16676 465 aa26.01■■□□□ 1.75
CYTH3-205ENST00000466543 SETD5Q9C0A6 1442 aa26.01■■□□□ 1.75
CYTH3-205ENST00000466543 ROBO2Q9HCK4 1378 aa26.01■■□□□ 1.75
CYTH3-205ENST00000466543 MEX3CQ5U5Q3 659 aaKnown RBP26■■□□□ 1.75
CYTH3-205ENST00000466543 PTCH1Q13635 1447 aa25.98■■□□□ 1.75
CYTH3-205ENST00000466543 NUTM2BA6NNL0 878 aaPredicted RBP25.98■■□□□ 1.75
CYTH3-205ENST00000466543 NUTM2EB1AL46 878 aaPredicted RBP25.98■■□□□ 1.75
CYTH3-205ENST00000466543 VGFO15240 615 aaPredicted RBP25.98■■□□□ 1.75
CYTH3-205ENST00000466543 NUTM2AQ8IVF1 878 aaPredicted RBP25.98■■□□□ 1.75
CYTH3-205ENST00000466543 PRAG1Q86YV5 1406 aa25.96■■□□□ 1.75
CYTH3-205ENST00000466543 C1orf167Q5SNV9 1468 aa25.95■■□□□ 1.74
CYTH3-205ENST00000466543 RPGRIP1LQ68CZ1 1315 aa25.94■■□□□ 1.74
CYTH3-205ENST00000466543 ZNF772Q68DY9 489 aaPredicted RBP25.93■■□□□ 1.74
CYTH3-205ENST00000466543 PNPLA6Q8IY17 1366 aa25.92■■□□□ 1.74
CYTH3-205ENST00000466543 LAMC1P11047 1609 aa25.92■■□□□ 1.74
CYTH3-205ENST00000466543 LRRC59Q96AG4 307 aaKnown RBP25.9■■□□□ 1.74
CYTH3-205ENST00000466543 ORAI2Q96SN7 254 aa25.89■■□□□ 1.74
CYTH3-205ENST00000466543 ADGRF5Q8IZF2 1346 aa25.88■■□□□ 1.73
CYTH3-205ENST00000466543 SPATA31E1Q6ZUB1 1445 aa25.88■■□□□ 1.73
CYTH3-205ENST00000466543 IFT172Q9UG01 1749 aa25.88■■□□□ 1.73
CYTH3-205ENST00000466543 AFF2P51816 1311 aa25.88■■□□□ 1.73
CYTH3-205ENST00000466543 CCDC144AA2RUR9 1427 aa25.85■■□□□ 1.73
CYTH3-205ENST00000466543 MPHOSPH9Q99550 1183 aa25.84■■□□□ 1.73
CYTH3-205ENST00000466543 RGL3Q3MIN7 710 aa25.83■■□□□ 1.73
CYTH3-205ENST00000466543 SOS2Q07890 1332 aaPredicted RBP25.83■■□□□ 1.73
CYTH3-205ENST00000466543 RXRBP28702 533 aa25.82■■□□□ 1.72
CYTH3-205ENST00000466543 C8orf37Q96NL8 207 aa25.82■■□□□ 1.72
CYTH3-205ENST00000466543 CDC42BPGQ6DT37 1551 aa25.81■■□□□ 1.72
CYTH3-205ENST00000466543 UPF1Q92900 1129 aaKnown RBP eCLIP25.8■■□□□ 1.72
CYTH3-205ENST00000466543 CDK12Q9NYV4 1490 aaPredicted RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms