RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 STRCP1A6NGW2 1772 aa15.21■□□□□ 0.02
CD40-204ENST00000466205 CLTCL1P53675 1640 aa15.21■□□□□ 0.02
CD40-204ENST00000466205 ZNF326Q5BKZ1 582 aaKnown RBP15.2■□□□□ 0.02
CD40-204ENST00000466205 ZFYVE9O95405 1425 aa15.19■□□□□ 0.02
CD40-204ENST00000466205 SETD5Q9C0A6 1442 aa15.19■□□□□ 0.02
CD40-204ENST00000466205 TRPM2O94759 1503 aa15.18■□□□□ 0.02
CD40-204ENST00000466205 CPS1P31327 1500 aa15.18■□□□□ 0.02
CD40-204ENST00000466205 RAB3GAP2Q9H2M9 1393 aa15.17■□□□□ 0.02
CD40-204ENST00000466205 UBAP1LF5GYI3 381 aa15.17■□□□□ 0.02
CD40-204ENST00000466205 MPHOSPH9Q99550 1183 aa15.17■□□□□ 0.02
CD40-204ENST00000466205 IQSEC2Q5JU85 1478 aa15.16■□□□□ 0.02
CD40-204ENST00000466205 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
CD40-204ENST00000466205 HDGFP51858 240 aaKnown RBP15.15■□□□□ 0.02
CD40-204ENST00000466205 RBM33Q96EV2 1170 aaKnown RBP15.15■□□□□ 0.02
CD40-204ENST00000466205 PLEKHG1Q9ULL1 1385 aa15.14■□□□□ 0.01
CD40-204ENST00000466205 LRRC7Q96NW7 1537 aa15.14■□□□□ 0.01
CD40-204ENST00000466205 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.14■□□□□ 0.01
CD40-204ENST00000466205 PIP4K2BP78356 416 aa15.13■□□□□ 0.01
CD40-204ENST00000466205 KIF1BO60333 1816 aa15.12■□□□□ 0.01
CD40-204ENST00000466205 NEXMIFQ5QGS0 1516 aa15.1■□□□□ 0.01
CD40-204ENST00000466205 ADAMTS13Q76LX8 1427 aa15.09■□□□□ 0.01
CD40-204ENST00000466205 KCNA6P17658 529 aa15.09■□□□□ 0.01
CD40-204ENST00000466205 RGL3Q3MIN7 710 aa15.08■□□□□ 0
CD40-204ENST00000466205 PROSER2Q86WR7 435 aaPredicted RBP15.08■□□□□ 0
CD40-204ENST00000466205 CCDC144AA2RUR9 1427 aa15.08■□□□□ 0
CD40-204ENST00000466205 TOM1O60784 492 aa15.07■□□□□ 0
CD40-204ENST00000466205 TMEM94Q12767 1356 aa15.07■□□□□ 0
CD40-204ENST00000466205 XIRP1Q702N8 1843 aaKnown RBP15.06■□□□□ 0
CD40-204ENST00000466205 TBX22Q9Y458 520 aa15.06■□□□□ 0
CD40-204ENST00000466205 NWD1Q149M9 1564 aa15.06■□□□□ 0
CD40-204ENST00000466205 NRXN3Q9Y4C0 1643 aa15.06■□□□□ 0
CD40-204ENST00000466205 ALKQ9UM73 1620 aa15.05■□□□□ -0
CD40-204ENST00000466205 CHD2O14647 1828 aaKnown RBP15.03■□□□□ -0
CD40-204ENST00000466205 DIP2AQ14689 1571 aa15.03■□□□□ -0
CD40-204ENST00000466205 PTPRUQ92729 1446 aa15.03■□□□□ -0
CD40-204ENST00000466205 SETBP1Q9Y6X0 1596 aa15.02■□□□□ -0
CD40-204ENST00000466205 NKTRP30414 1462 aaKnown RBP15.02■□□□□ -0
CD40-204ENST00000466205 METP08581 1390 aa15.02■□□□□ -0
CD40-204ENST00000466205 AMOTL2Q9Y2J4 779 aa15.02■□□□□ -0
CD40-204ENST00000466205 ACIN1Q9UKV3 1341 aaKnown RBP15.01□□□□□ -0.01
CD40-204ENST00000466205 C14orf37Q86TY3 774 aa15.01□□□□□ -0.01
CD40-204ENST00000466205 PPLO60437 1756 aa15.01□□□□□ -0.01
CD40-204ENST00000466205 VGFO15240 615 aaPredicted RBP15□□□□□ -0.01
CD40-204ENST00000466205 SPATA31E1Q6ZUB1 1445 aa15□□□□□ -0.01
CD40-204ENST00000466205 ADGRF5Q8IZF2 1346 aa14.99□□□□□ -0.01
CD40-204ENST00000466205 HSPA1LP34931 641 aa14.99□□□□□ -0.01
CD40-204ENST00000466205 RPGRIP1LQ68CZ1 1315 aa14.98□□□□□ -0.01
CD40-204ENST00000466205 MSH6P52701 1360 aa14.98□□□□□ -0.01
CD40-204ENST00000466205 PIK3R4Q99570 1358 aa14.98□□□□□ -0.01
CD40-204ENST00000466205 XRN1Q8IZH2 1706 aaKnown RBP14.95□□□□□ -0.02
CD40-204ENST00000466205 IFT172Q9UG01 1749 aa14.95□□□□□ -0.02
CD40-204ENST00000466205 HRCP23327 699 aa14.95□□□□□ -0.02
CD40-204ENST00000466205 ANKRD30BQ9BXX2 1392 aa14.95□□□□□ -0.02
CD40-204ENST00000466205 SETD1AO15047 1707 aaKnown RBP14.95□□□□□ -0.02
CD40-204ENST00000466205 ILDR2Q71H61 639 aa14.94□□□□□ -0.02
CD40-204ENST00000466205 ROBO1Q9Y6N7 1651 aa14.91□□□□□ -0.02
CD40-204ENST00000466205 TMEM132EQ6IEE7 984 aa14.91□□□□□ -0.02
CD40-204ENST00000466205 STK26Q9P289 416 aa14.91□□□□□ -0.02
CD40-204ENST00000466205 KDM2AQ9Y2K7 1162 aa14.91□□□□□ -0.02
CD40-204ENST00000466205 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.91□□□□□ -0.02
CD40-204ENST00000466205 ATF3P18847 181 aa14.9□□□□□ -0.02
CD40-204ENST00000466205 ROBO2Q9HCK4 1378 aa14.89□□□□□ -0.03
CD40-204ENST00000466205 SLAIN2Q9P270 581 aa14.89□□□□□ -0.03
CD40-204ENST00000466205 PIK3C2GO75747 1445 aa14.89□□□□□ -0.03
CD40-204ENST00000466205 DISP3Q9P2K9 1392 aa14.88□□□□□ -0.03
CD40-204ENST00000466205 ASXL1Q8IXJ9 1541 aa14.88□□□□□ -0.03
CD40-204ENST00000466205 DCAF11Q8TEB1 546 aa14.88□□□□□ -0.03
CD40-204ENST00000466205 C19orf44Q9H6X5 657 aa14.88□□□□□ -0.03
CD40-204ENST00000466205 NCOA3Q9Y6Q9 1424 aa14.88□□□□□ -0.03
CD40-204ENST00000466205 NALCNQ8IZF0 1738 aa14.87□□□□□ -0.03
CD40-204ENST00000466205 FAM135BQ49AJ0 1406 aa14.87□□□□□ -0.03
CD40-204ENST00000466205 CFAP70Q5T0N1 1121 aa14.87□□□□□ -0.03
CD40-204ENST00000466205 MYOM2P54296 1465 aa14.87□□□□□ -0.03
CD40-204ENST00000466205 TRIM26Q12899 539 aaPredicted RBP14.86□□□□□ -0.03
CD40-204ENST00000466205 CADPS2Q86UW7 1296 aa14.86□□□□□ -0.03
CD40-204ENST00000466205 PTCH1Q13635 1447 aa14.85□□□□□ -0.03
CD40-204ENST00000466205 ADGRL3Q9HAR2 1447 aa14.84□□□□□ -0.03
CD40-204ENST00000466205 WAPLQ7Z5K2 1190 aa14.84□□□□□ -0.03
CD40-204ENST00000466205 NRXN1Q9ULB1 1477 aa14.83□□□□□ -0.03
CD40-204ENST00000466205 SOCS7O14512 581 aa14.83□□□□□ -0.04
CD40-204ENST00000466205 SIN3AQ96ST3 1273 aa14.83□□□□□ -0.04
CD40-204ENST00000466205 C14orf93Q9H972 538 aaKnown RBP14.83□□□□□ -0.04
CD40-204ENST00000466205 DHX57Q6P158 1386 aaKnown RBP14.83□□□□□ -0.04
CD40-204ENST00000466205 PLEKHH1Q9ULM0 1364 aa14.83□□□□□ -0.04
CD40-204ENST00000466205 LRPPRCP42704 1394 aaKnown RBP14.82□□□□□ -0.04
CD40-204ENST00000466205 MST1RQ04912 1400 aa14.82□□□□□ -0.04
CD40-204ENST00000466205 YTHDC2Q9H6S0 1430 aaKnown RBP14.82□□□□□ -0.04
CD40-204ENST00000466205 PHLPP1O60346 1717 aa14.81□□□□□ -0.04
CD40-204ENST00000466205 NEUROD1Q13562 356 aa14.81□□□□□ -0.04
CD40-204ENST00000466205 MED1Q15648 1581 aaPredicted RBP14.81□□□□□ -0.04
CD40-204ENST00000466205 NUTM2FA1L443 756 aa14.8□□□□□ -0.04
CD40-204ENST00000466205 SAFB2Q14151 953 aaKnown RBP eCLIP14.8□□□□□ -0.04
CD40-204ENST00000466205 BRINP3Q76B58 766 aa14.8□□□□□ -0.04
CD40-204ENST00000466205 DDX17Q92841 729 aaKnown RBP14.8□□□□□ -0.04
CD40-204ENST00000466205 DCCP43146 1447 aa14.8□□□□□ -0.04
CD40-204ENST00000466205 LAMC1P11047 1609 aa14.79□□□□□ -0.04
CD40-204ENST00000466205 KNDC1Q76NI1 1749 aa14.79□□□□□ -0.04
CD40-204ENST00000466205 PRAG1Q86YV5 1406 aa14.78□□□□□ -0.04
CD40-204ENST00000466205 TRAK1Q9UPV9 953 aa14.78□□□□□ -0.04
CD40-204ENST00000466205 TECPR2O15040 1411 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms