RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 PLEKHG1Q9ULL1 1385 aa15.65■□□□□ 0.1
NPHP3-203ENST00000465756 TRPM2O94759 1503 aa15.65■□□□□ 0.1
NPHP3-203ENST00000465756 C14orf37Q86TY3 774 aa15.65■□□□□ 0.1
NPHP3-203ENST00000465756 E9PCH4 1651 aa15.65■□□□□ 0.1
NPHP3-203ENST00000465756 SPHKAPQ2M3C7 1700 aa15.65■□□□□ 0.1
NPHP3-203ENST00000465756 TBX22Q9Y458 520 aa15.64■□□□□ 0.09
NPHP3-203ENST00000465756 PIK3R4Q99570 1358 aa15.64■□□□□ 0.09
NPHP3-203ENST00000465756 ANKRD30BQ9BXX2 1392 aa15.64■□□□□ 0.09
NPHP3-203ENST00000465756 SYNMO15061 1565 aa15.64■□□□□ 0.09
NPHP3-203ENST00000465756 IQGAP1P46940 1657 aa15.63■□□□□ 0.09
NPHP3-203ENST00000465756 KCNA6P17658 529 aa15.62■□□□□ 0.09
NPHP3-203ENST00000465756 PROSER2Q86WR7 435 aaPredicted RBP15.62■□□□□ 0.09
NPHP3-203ENST00000465756 STRCQ7RTU9 1775 aa15.61■□□□□ 0.09
NPHP3-203ENST00000465756 KIF1BO60333 1816 aa15.61■□□□□ 0.09
NPHP3-203ENST00000465756 UBAP1LF5GYI3 381 aa15.61■□□□□ 0.09
NPHP3-203ENST00000465756 DIP2AQ14689 1571 aa15.6■□□□□ 0.09
NPHP3-203ENST00000465756 ZNF335Q9H4Z2 1342 aaPredicted RBP15.59■□□□□ 0.09
NPHP3-203ENST00000465756 SCAF1Q9H7N4 1312 aaKnown RBP15.59■□□□□ 0.09
NPHP3-203ENST00000465756 LTKP29376 864 aa15.59■□□□□ 0.09
NPHP3-203ENST00000465756 SLC26A8Q96RN1 970 aa15.57■□□□□ 0.08
NPHP3-203ENST00000465756 MSH6P52701 1360 aa15.56■□□□□ 0.08
NPHP3-203ENST00000465756 TMEM131LA2VDJ0 1609 aa15.55■□□□□ 0.08
NPHP3-203ENST00000465756 NKTRP30414 1462 aaKnown RBP15.55■□□□□ 0.08
NPHP3-203ENST00000465756 RGL3Q3MIN7 710 aa15.55■□□□□ 0.08
NPHP3-203ENST00000465756 NEURL4Q96JN8 1562 aa15.54■□□□□ 0.08
NPHP3-203ENST00000465756 ZFYVE9O95405 1425 aa15.54■□□□□ 0.08
NPHP3-203ENST00000465756 ATF3P18847 181 aa15.53■□□□□ 0.08
NPHP3-203ENST00000465756 NCOA3Q9Y6Q9 1424 aa15.52■□□□□ 0.08
NPHP3-203ENST00000465756 CLTCL1P53675 1640 aa15.51■□□□□ 0.07
NPHP3-203ENST00000465756 NUTM2DQ5VT03 806 aaPredicted RBP15.5■□□□□ 0.07
NPHP3-203ENST00000465756 CADPS2Q86UW7 1296 aa15.5■□□□□ 0.07
NPHP3-203ENST00000465756 FOXD1Q16676 465 aa15.49■□□□□ 0.07
NPHP3-203ENST00000465756 LTBP4Q8N2S1 1624 aa15.48■□□□□ 0.07
NPHP3-203ENST00000465756 DHX57Q6P158 1386 aaKnown RBP15.48■□□□□ 0.07
NPHP3-203ENST00000465756 ILDR1Q86SU0 546 aaPredicted RBP15.47■□□□□ 0.07
NPHP3-203ENST00000465756 AMOTL2Q9Y2J4 779 aa15.47■□□□□ 0.07
NPHP3-203ENST00000465756 TMEM94Q12767 1356 aa15.45■□□□□ 0.06
NPHP3-203ENST00000465756 PIP4K2BP78356 416 aa15.44■□□□□ 0.06
NPHP3-203ENST00000465756 C19orf44Q9H6X5 657 aa15.44■□□□□ 0.06
NPHP3-203ENST00000465756 SETBP1Q9Y6X0 1596 aa15.44■□□□□ 0.06
NPHP3-203ENST00000465756 SENP3Q9H4L4 574 aaPredicted RBP15.43■□□□□ 0.06
NPHP3-203ENST00000465756 DCAF11Q8TEB1 546 aa15.42■□□□□ 0.06
NPHP3-203ENST00000465756 POGKQ9P215 609 aa15.42■□□□□ 0.06
NPHP3-203ENST00000465756 NEXMIFQ5QGS0 1516 aa15.42■□□□□ 0.06
NPHP3-203ENST00000465756 LRRC7Q96NW7 1537 aa15.42■□□□□ 0.06
NPHP3-203ENST00000465756 MYO5BQ9ULV0 1848 aa15.42■□□□□ 0.06
NPHP3-203ENST00000465756 EIF3AQ14152 1382 aaKnown RBP15.41■□□□□ 0.06
NPHP3-203ENST00000465756 KDM2AQ9Y2K7 1162 aa15.41■□□□□ 0.06
NPHP3-203ENST00000465756 MYOM2P54296 1465 aa15.41■□□□□ 0.06
NPHP3-203ENST00000465756 NWD1Q149M9 1564 aa15.41■□□□□ 0.06
NPHP3-203ENST00000465756 ADAMTS13Q76LX8 1427 aa15.41■□□□□ 0.06
NPHP3-203ENST00000465756 SPATA31E1Q6ZUB1 1445 aa15.41■□□□□ 0.06
NPHP3-203ENST00000465756 TONSLQ96HA7 1378 aa15.4■□□□□ 0.06
NPHP3-203ENST00000465756 DCCP43146 1447 aa15.38■□□□□ 0.05
NPHP3-203ENST00000465756 SIRT1Q96EB6 747 aa15.38■□□□□ 0.05
NPHP3-203ENST00000465756 LAMC1P11047 1609 aa15.38■□□□□ 0.05
NPHP3-203ENST00000465756 LRPPRCP42704 1394 aaKnown RBP15.38■□□□□ 0.05
NPHP3-203ENST00000465756 C14orf93Q9H972 538 aaKnown RBP15.37■□□□□ 0.05
NPHP3-203ENST00000465756 CLSPNQ9HAW4 1339 aa15.37■□□□□ 0.05
NPHP3-203ENST00000465756 STK26Q9P289 416 aa15.36■□□□□ 0.05
NPHP3-203ENST00000465756 PTCH1Q13635 1447 aa15.36■□□□□ 0.05
NPHP3-203ENST00000465756 SLC24A1O60721 1099 aa15.36■□□□□ 0.05
NPHP3-203ENST00000465756 NEUROD1Q13562 356 aa15.36■□□□□ 0.05
NPHP3-203ENST00000465756 PPLO60437 1756 aa15.35■□□□□ 0.05
NPHP3-203ENST00000465756 ADGRF5Q8IZF2 1346 aa15.34■□□□□ 0.05
NPHP3-203ENST00000465756 ABCC11Q96J66 1382 aa15.34■□□□□ 0.05
NPHP3-203ENST00000465756 SLAIN2Q9P270 581 aa15.34■□□□□ 0.05
NPHP3-203ENST00000465756 ALKQ9UM73 1620 aa15.33■□□□□ 0.05
NPHP3-203ENST00000465756 CHD2O14647 1828 aaKnown RBP15.33■□□□□ 0.05
NPHP3-203ENST00000465756 FAM135BQ49AJ0 1406 aa15.33■□□□□ 0.04
NPHP3-203ENST00000465756 ADGRL3Q9HAR2 1447 aa15.33■□□□□ 0.04
NPHP3-203ENST00000465756 PIK3C2GO75747 1445 aa15.31■□□□□ 0.04
NPHP3-203ENST00000465756 PHF23Q9BUL5 403 aaPredicted RBP15.31■□□□□ 0.04
NPHP3-203ENST00000465756 TIMELESSQ9UNS1 1208 aa15.31■□□□□ 0.04
NPHP3-203ENST00000465756 METP08581 1390 aa15.31■□□□□ 0.04
NPHP3-203ENST00000465756 PCGF6Q9BYE7 350 aa15.3■□□□□ 0.04
NPHP3-203ENST00000465756 YTHDC2Q9H6S0 1430 aaKnown RBP15.3■□□□□ 0.04
NPHP3-203ENST00000465756 CFAP70Q5T0N1 1121 aa15.29■□□□□ 0.04
NPHP3-203ENST00000465756 CCER1Q8TC90 406 aaPredicted RBP15.29■□□□□ 0.04
NPHP3-203ENST00000465756 PRAG1Q86YV5 1406 aa15.29■□□□□ 0.04
NPHP3-203ENST00000465756 TECPR2O15040 1411 aa15.26■□□□□ 0.03
NPHP3-203ENST00000465756 XRN1Q8IZH2 1706 aaKnown RBP15.26■□□□□ 0.03
NPHP3-203ENST00000465756 PSME1Q06323 249 aa15.26■□□□□ 0.03
NPHP3-203ENST00000465756 TMEM132EQ6IEE7 984 aa15.25■□□□□ 0.03
NPHP3-203ENST00000465756 NRXN1Q9ULB1 1477 aa15.24■□□□□ 0.03
NPHP3-203ENST00000465756 NPHP3Q7Z494 1330 aa15.24■□□□□ 0.03
NPHP3-203ENST00000465756 PTPRUQ92729 1446 aa15.24■□□□□ 0.03
NPHP3-203ENST00000465756 TRAK1Q9UPV9 953 aa15.24■□□□□ 0.03
NPHP3-203ENST00000465756 DLC1Q96QB1 1528 aa15.23■□□□□ 0.03
NPHP3-203ENST00000465756 HSPA1LP34931 641 aa15.23■□□□□ 0.03
NPHP3-203ENST00000465756 MEX3CQ5U5Q3 659 aaKnown RBP15.23■□□□□ 0.03
NPHP3-203ENST00000465756 IFT172Q9UG01 1749 aa15.23■□□□□ 0.03
NPHP3-203ENST00000465756 L3MBTL2Q969R5 705 aa15.23■□□□□ 0.03
NPHP3-203ENST00000465756 LRRC59Q96AG4 307 aaKnown RBP15.23■□□□□ 0.03
NPHP3-203ENST00000465756 NRXN3Q9Y4C0 1643 aa15.23■□□□□ 0.03
NPHP3-203ENST00000465756 PRAM1Q96QH2 718 aa15.22■□□□□ 0.03
NPHP3-203ENST00000465756 JCADQ9P266 1359 aa15.22■□□□□ 0.03
NPHP3-203ENST00000465756 RBM33Q96EV2 1170 aaKnown RBP15.22■□□□□ 0.03
NPHP3-203ENST00000465756 ROCK2O75116 1388 aaKnown RBP15.22■□□□□ 0.03
NPHP3-203ENST00000465756 ROBO2Q9HCK4 1378 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms