RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 SCAF1Q9H7N4 1312 aaKnown RBP23.35■■□□□ 1.33
SCAP-209ENST00000465628 HDGFP51858 240 aaKnown RBP23.34■■□□□ 1.33
SCAP-209ENST00000465628 ZFYVE9O95405 1425 aa23.33■■□□□ 1.32
SCAP-209ENST00000465628 SLC26A8Q96RN1 970 aa23.31■■□□□ 1.32
SCAP-209ENST00000465628 TRPM2O94759 1503 aa23.31■■□□□ 1.32
SCAP-209ENST00000465628 LRRC7Q96NW7 1537 aa23.3■■□□□ 1.32
SCAP-209ENST00000465628 NUTM2DQ5VT03 806 aaPredicted RBP23.29■■□□□ 1.32
SCAP-209ENST00000465628 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
SCAP-209ENST00000465628 SLC4A1APQ9BWU0 796 aaKnown RBP23.29■■□□□ 1.32
SCAP-209ENST00000465628 CLTCL1P53675 1640 aa23.29■■□□□ 1.32
SCAP-209ENST00000465628 PLEKHG1Q9ULL1 1385 aa23.28■■□□□ 1.32
SCAP-209ENST00000465628 TOM1O60784 492 aa23.28■■□□□ 1.32
SCAP-209ENST00000465628 PIP4K2BP78356 416 aa23.28■■□□□ 1.32
SCAP-209ENST00000465628 ZNF326Q5BKZ1 582 aaKnown RBP23.28■■□□□ 1.32
SCAP-209ENST00000465628 KIF1BO60333 1816 aa23.26■■□□□ 1.31
SCAP-209ENST00000465628 NWD1Q149M9 1564 aa23.23■■□□□ 1.31
SCAP-209ENST00000465628 DIP2AQ14689 1571 aa23.22■■□□□ 1.31
SCAP-209ENST00000465628 NKTRP30414 1462 aaKnown RBP23.21■■□□□ 1.31
SCAP-209ENST00000465628 KCNA6P17658 529 aa23.2■■□□□ 1.3
SCAP-209ENST00000465628 XIRP1Q702N8 1843 aaKnown RBP23.19■■□□□ 1.3
SCAP-209ENST00000465628 PROSER2Q86WR7 435 aaPredicted RBP23.18■■□□□ 1.3
SCAP-209ENST00000465628 SETD5Q9C0A6 1442 aa23.17■■□□□ 1.3
SCAP-209ENST00000465628 TMEM94Q12767 1356 aa23.17■■□□□ 1.3
SCAP-209ENST00000465628 CHD2O14647 1828 aaKnown RBP23.16■■□□□ 1.3
SCAP-209ENST00000465628 FOXD1Q16676 465 aa23.15■■□□□ 1.3
SCAP-209ENST00000465628 ADAMTS13Q76LX8 1427 aa23.15■■□□□ 1.3
SCAP-209ENST00000465628 NEXMIFQ5QGS0 1516 aa23.14■■□□□ 1.3
SCAP-209ENST00000465628 ALKQ9UM73 1620 aa23.13■■□□□ 1.29
SCAP-209ENST00000465628 RBM33Q96EV2 1170 aaKnown RBP23.13■■□□□ 1.29
SCAP-209ENST00000465628 CCDC144AA2RUR9 1427 aa23.12■■□□□ 1.29
SCAP-209ENST00000465628 TBX22Q9Y458 520 aa23.12■■□□□ 1.29
SCAP-209ENST00000465628 SETBP1Q9Y6X0 1596 aa23.12■■□□□ 1.29
SCAP-209ENST00000465628 MPHOSPH9Q99550 1183 aa23.11■■□□□ 1.29
SCAP-209ENST00000465628 ACIN1Q9UKV3 1341 aaKnown RBP23.1■■□□□ 1.29
SCAP-209ENST00000465628 C14orf37Q86TY3 774 aa23.1■■□□□ 1.29
SCAP-209ENST00000465628 NRXN3Q9Y4C0 1643 aa23.1■■□□□ 1.29
SCAP-209ENST00000465628 MSH6P52701 1360 aa23.1■■□□□ 1.29
SCAP-209ENST00000465628 RAB3GAP2Q9H2M9 1393 aa23.1■■□□□ 1.29
SCAP-209ENST00000465628 HSPA1LP34931 641 aa23.09■■□□□ 1.29
SCAP-209ENST00000465628 PIK3R4Q99570 1358 aa23.08■■□□□ 1.29
SCAP-209ENST00000465628 DISP3Q9P2K9 1392 aa23.06■■□□□ 1.28
SCAP-209ENST00000465628 PPLO60437 1756 aa23.04■■□□□ 1.28
SCAP-209ENST00000465628 VGFO15240 615 aaPredicted RBP23.02■■□□□ 1.28
SCAP-209ENST00000465628 XRN1Q8IZH2 1706 aaKnown RBP23.02■■□□□ 1.28
SCAP-209ENST00000465628 AMOTL2Q9Y2J4 779 aa23.01■■□□□ 1.27
SCAP-209ENST00000465628 PTPRUQ92729 1446 aa23■■□□□ 1.27
SCAP-209ENST00000465628 RPGRIP1LQ68CZ1 1315 aa23■■□□□ 1.27
SCAP-209ENST00000465628 ROBO1Q9Y6N7 1651 aa23■■□□□ 1.27
SCAP-209ENST00000465628 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
SCAP-209ENST00000465628 METP08581 1390 aa22.99■■□□□ 1.27
SCAP-209ENST00000465628 NCOA3Q9Y6Q9 1424 aa22.96■■□□□ 1.27
SCAP-209ENST00000465628 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.95■■□□□ 1.26
SCAP-209ENST00000465628 SETD1AO15047 1707 aaKnown RBP22.94■■□□□ 1.26
SCAP-209ENST00000465628 IFT172Q9UG01 1749 aa22.94■■□□□ 1.26
SCAP-209ENST00000465628 SPATA31E1Q6ZUB1 1445 aa22.94■■□□□ 1.26
SCAP-209ENST00000465628 ATF3P18847 181 aa22.94■■□□□ 1.26
SCAP-209ENST00000465628 FAM135BQ49AJ0 1406 aa22.93■■□□□ 1.26
SCAP-209ENST00000465628 MED1Q15648 1581 aaPredicted RBP22.93■■□□□ 1.26
SCAP-209ENST00000465628 CADPS2Q86UW7 1296 aa22.91■■□□□ 1.26
SCAP-209ENST00000465628 ANKRD30BQ9BXX2 1392 aa22.9■■□□□ 1.26
SCAP-209ENST00000465628 C19orf44Q9H6X5 657 aa22.9■■□□□ 1.26
SCAP-209ENST00000465628 SLAIN2Q9P270 581 aa22.9■■□□□ 1.26
SCAP-209ENST00000465628 PHLPP1O60346 1717 aa22.88■■□□□ 1.25
SCAP-209ENST00000465628 ADGRF5Q8IZF2 1346 aa22.87■■□□□ 1.25
SCAP-209ENST00000465628 PTCH1Q13635 1447 aa22.87■■□□□ 1.25
SCAP-209ENST00000465628 NALCNQ8IZF0 1738 aa22.87■■□□□ 1.25
SCAP-209ENST00000465628 DCCP43146 1447 aa22.86■■□□□ 1.25
SCAP-209ENST00000465628 ADGRL3Q9HAR2 1447 aa22.85■■□□□ 1.25
SCAP-209ENST00000465628 PHF23Q9BUL5 403 aaPredicted RBP22.84■■□□□ 1.25
SCAP-209ENST00000465628 PIK3C2GO75747 1445 aa22.82■■□□□ 1.24
SCAP-209ENST00000465628 HRCP23327 699 aa22.82■■□□□ 1.24
SCAP-209ENST00000465628 ROBO2Q9HCK4 1378 aa22.81■■□□□ 1.24
SCAP-209ENST00000465628 MYOM2P54296 1465 aa22.8■■□□□ 1.24
SCAP-209ENST00000465628 LAMC1P11047 1609 aa22.79■■□□□ 1.24
SCAP-209ENST00000465628 STK26Q9P289 416 aa22.79■■□□□ 1.24
SCAP-209ENST00000465628 MST1RQ04912 1400 aa22.77■■□□□ 1.24
SCAP-209ENST00000465628 PRAG1Q86YV5 1406 aa22.77■■□□□ 1.24
SCAP-209ENST00000465628 ASXL1Q8IXJ9 1541 aa22.77■■□□□ 1.24
SCAP-209ENST00000465628 COL16A1Q07092 1604 aaPredicted RBP22.76■■□□□ 1.23
SCAP-209ENST00000465628 KNDC1Q76NI1 1749 aa22.76■■□□□ 1.23
SCAP-209ENST00000465628 AHDC1Q5TGY3 1603 aaPredicted RBP22.75■■□□□ 1.23
SCAP-209ENST00000465628 TMEM132EQ6IEE7 984 aa22.74■■□□□ 1.23
SCAP-209ENST00000465628 LRPPRCP42704 1394 aaKnown RBP22.74■■□□□ 1.23
SCAP-209ENST00000465628 ILDR2Q71H61 639 aa22.73■■□□□ 1.23
SCAP-209ENST00000465628 BRINP3Q76B58 766 aa22.73■■□□□ 1.23
SCAP-209ENST00000465628 NRXN1Q9ULB1 1477 aa22.73■■□□□ 1.23
SCAP-209ENST00000465628 JCADQ9P266 1359 aa22.72■■□□□ 1.23
SCAP-209ENST00000465628 YTHDC2Q9H6S0 1430 aaKnown RBP22.72■■□□□ 1.23
SCAP-209ENST00000465628 KDM2AQ9Y2K7 1162 aa22.71■■□□□ 1.23
SCAP-209ENST00000465628 TECPR2O15040 1411 aa22.7■■□□□ 1.22
SCAP-209ENST00000465628 NHSL1Q5SYE7 1610 aa22.69■■□□□ 1.22
SCAP-209ENST00000465628 CDC42BPGQ6DT37 1551 aa22.69■■□□□ 1.22
SCAP-209ENST00000465628 CFAP70Q5T0N1 1121 aa22.68■■□□□ 1.22
SCAP-209ENST00000465628 DCAF11Q8TEB1 546 aa22.68■■□□□ 1.22
SCAP-209ENST00000465628 C1orf167Q5SNV9 1468 aa22.67■■□□□ 1.22
SCAP-209ENST00000465628 DHX57Q6P158 1386 aaKnown RBP22.67■■□□□ 1.22
SCAP-209ENST00000465628 C14orf93Q9H972 538 aaKnown RBP22.67■■□□□ 1.22
SCAP-209ENST00000465628 ABCC11Q96J66 1382 aa22.66■■□□□ 1.22
SCAP-209ENST00000465628 WAPLQ7Z5K2 1190 aa22.66■■□□□ 1.22
SCAP-209ENST00000465628 SHPRHQ149N8 1683 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms