RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 RIMS2Q9UQ26 1411 aa26.04■■□□□ 1.76
TOM1-213ENST00000465529 SPHKAPQ2M3C7 1700 aa26.03■■□□□ 1.76
TOM1-213ENST00000465529 SCAF1Q9H7N4 1312 aaKnown RBP26.03■■□□□ 1.76
TOM1-213ENST00000465529 NUTM2DQ5VT03 806 aaPredicted RBP25.99■■□□□ 1.75
TOM1-213ENST00000465529 HFM1A2PYH4 1435 aa25.98■■□□□ 1.75
TOM1-213ENST00000465529 TOM1O60784 492 aa25.98■■□□□ 1.75
TOM1-213ENST00000465529 BCANQ96GW7 911 aa25.97■■□□□ 1.75
TOM1-213ENST00000465529 PLEKHG1Q9ULL1 1385 aa25.95■■□□□ 1.75
TOM1-213ENST00000465529 PPP1R15AO75807 674 aaPredicted RBP25.95■■□□□ 1.74
TOM1-213ENST00000465529 CLTCL1P53675 1640 aa25.93■■□□□ 1.74
TOM1-213ENST00000465529 RBM33Q96EV2 1170 aaKnown RBP25.93■■□□□ 1.74
TOM1-213ENST00000465529 NWD1Q149M9 1564 aa25.93■■□□□ 1.74
TOM1-213ENST00000465529 HSPA1LP34931 641 aa25.92■■□□□ 1.74
TOM1-213ENST00000465529 KCNA6P17658 529 aa25.91■■□□□ 1.74
TOM1-213ENST00000465529 TRIM52Q96A61 297 aa25.91■■□□□ 1.74
TOM1-213ENST00000465529 CHD2O14647 1828 aaKnown RBP25.9■■□□□ 1.74
TOM1-213ENST00000465529 TMEM94Q12767 1356 aa25.89■■□□□ 1.74
TOM1-213ENST00000465529 DISP3Q9P2K9 1392 aa25.89■■□□□ 1.74
TOM1-213ENST00000465529 TRPM2O94759 1503 aa25.88■■□□□ 1.73
TOM1-213ENST00000465529 ADAMTS13Q76LX8 1427 aa25.88■■□□□ 1.73
TOM1-213ENST00000465529 HDGFP51858 240 aaKnown RBP25.86■■□□□ 1.73
TOM1-213ENST00000465529 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.86■■□□□ 1.73
TOM1-213ENST00000465529 PROSER2Q86WR7 435 aaPredicted RBP25.85■■□□□ 1.73
TOM1-213ENST00000465529 NKTRP30414 1462 aaKnown RBP25.85■■□□□ 1.73
TOM1-213ENST00000465529 NRXN3Q9Y4C0 1643 aa25.83■■□□□ 1.73
TOM1-213ENST00000465529 KIF1BO60333 1816 aa25.82■■□□□ 1.72
TOM1-213ENST00000465529 ZNF326Q5BKZ1 582 aaKnown RBP25.81■■□□□ 1.72
TOM1-213ENST00000465529 DIP2AQ14689 1571 aa25.81■■□□□ 1.72
TOM1-213ENST00000465529 SLC4A1APQ9BWU0 796 aaKnown RBP25.8■■□□□ 1.72
TOM1-213ENST00000465529 TBX22Q9Y458 520 aa25.8■■□□□ 1.72
TOM1-213ENST00000465529 NEXMIFQ5QGS0 1516 aa25.79■■□□□ 1.72
TOM1-213ENST00000465529 FOXD1Q16676 465 aa25.78■■□□□ 1.72
TOM1-213ENST00000465529 PTPRUQ92729 1446 aa25.76■■□□□ 1.71
TOM1-213ENST00000465529 SETBP1Q9Y6X0 1596 aa25.75■■□□□ 1.71
TOM1-213ENST00000465529 ILDR2Q71H61 639 aa25.75■■□□□ 1.71
TOM1-213ENST00000465529 MED1Q15648 1581 aaPredicted RBP25.73■■□□□ 1.71
TOM1-213ENST00000465529 ROBO1Q9Y6N7 1651 aa25.72■■□□□ 1.71
TOM1-213ENST00000465529 MSH6P52701 1360 aa25.69■■□□□ 1.7
TOM1-213ENST00000465529 PIK3R4Q99570 1358 aa25.69■■□□□ 1.7
TOM1-213ENST00000465529 XRN1Q8IZH2 1706 aaKnown RBP25.68■■□□□ 1.7
TOM1-213ENST00000465529 AMOTL2Q9Y2J4 779 aa25.68■■□□□ 1.7
TOM1-213ENST00000465529 METP08581 1390 aa25.68■■□□□ 1.7
TOM1-213ENST00000465529 FAM135BQ49AJ0 1406 aa25.67■■□□□ 1.7
TOM1-213ENST00000465529 MPHOSPH9Q99550 1183 aa25.66■■□□□ 1.7
TOM1-213ENST00000465529 PPLO60437 1756 aa25.66■■□□□ 1.7
TOM1-213ENST00000465529 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.66■■□□□ 1.7
TOM1-213ENST00000465529 SETD5Q9C0A6 1442 aa25.64■■□□□ 1.7
TOM1-213ENST00000465529 SETD1AO15047 1707 aaKnown RBP25.63■■□□□ 1.69
TOM1-213ENST00000465529 C14orf37Q86TY3 774 aa25.63■■□□□ 1.69
TOM1-213ENST00000465529 SLAIN2Q9P270 581 aa25.6■■□□□ 1.69
TOM1-213ENST00000465529 NCOA3Q9Y6Q9 1424 aa25.6■■□□□ 1.69
TOM1-213ENST00000465529 CCDC144AA2RUR9 1427 aa25.59■■□□□ 1.69
TOM1-213ENST00000465529 RAB3GAP2Q9H2M9 1393 aa25.58■■□□□ 1.69
TOM1-213ENST00000465529 PHLPP1O60346 1717 aa25.56■■□□□ 1.68
TOM1-213ENST00000465529 IFT172Q9UG01 1749 aa25.55■■□□□ 1.68
TOM1-213ENST00000465529 SPATA31E1Q6ZUB1 1445 aa25.54■■□□□ 1.68
TOM1-213ENST00000465529 VGFO15240 615 aaPredicted RBP25.54■■□□□ 1.68
TOM1-213ENST00000465529 RGL3Q3MIN7 710 aa25.54■■□□□ 1.68
TOM1-213ENST00000465529 C19orf44Q9H6X5 657 aa25.54■■□□□ 1.68
TOM1-213ENST00000465529 RPGRIP1LQ68CZ1 1315 aa25.54■■□□□ 1.68
TOM1-213ENST00000465529 NALCNQ8IZF0 1738 aa25.53■■□□□ 1.68
TOM1-213ENST00000465529 ADGRF5Q8IZF2 1346 aa25.51■■□□□ 1.67
TOM1-213ENST00000465529 ATF3P18847 181 aa25.5■■□□□ 1.67
TOM1-213ENST00000465529 CADPS2Q86UW7 1296 aa25.5■■□□□ 1.67
TOM1-213ENST00000465529 COL16A1Q07092 1604 aaPredicted RBP25.48■■□□□ 1.67
TOM1-213ENST00000465529 ROBO2Q9HCK4 1378 aa25.46■■□□□ 1.67
TOM1-213ENST00000465529 PHF23Q9BUL5 403 aaPredicted RBP25.46■■□□□ 1.67
TOM1-213ENST00000465529 DCCP43146 1447 aa25.46■■□□□ 1.67
TOM1-213ENST00000465529 ADGRL3Q9HAR2 1447 aa25.46■■□□□ 1.67
TOM1-213ENST00000465529 MST1RQ04912 1400 aa25.45■■□□□ 1.66
TOM1-213ENST00000465529 PTCH1Q13635 1447 aa25.44■■□□□ 1.66
TOM1-213ENST00000465529 AHDC1Q5TGY3 1603 aaPredicted RBP25.42■■□□□ 1.66
TOM1-213ENST00000465529 SOCS7O14512 581 aa25.42■■□□□ 1.66
TOM1-213ENST00000465529 BRINP3Q76B58 766 aa25.42■■□□□ 1.66
TOM1-213ENST00000465529 ASXL1Q8IXJ9 1541 aa25.42■■□□□ 1.66
TOM1-213ENST00000465529 ANKRD30BQ9BXX2 1392 aa25.4■■□□□ 1.66
TOM1-213ENST00000465529 ACIN1Q9UKV3 1341 aaKnown RBP25.39■■□□□ 1.66
TOM1-213ENST00000465529 PIK3C2GO75747 1445 aa25.38■■□□□ 1.65
TOM1-213ENST00000465529 PRAG1Q86YV5 1406 aa25.38■■□□□ 1.65
TOM1-213ENST00000465529 JCADQ9P266 1359 aa25.37■■□□□ 1.65
TOM1-213ENST00000465529 RGS17Q9UGC6 210 aaPredicted RBP25.37■■□□□ 1.65
TOM1-213ENST00000465529 NHSL1Q5SYE7 1610 aa25.36■■□□□ 1.65
TOM1-213ENST00000465529 TMEM132EQ6IEE7 984 aa25.35■■□□□ 1.65
TOM1-213ENST00000465529 DDX17Q92841 729 aaKnown RBP25.34■■□□□ 1.65
TOM1-213ENST00000465529 STK26Q9P289 416 aa25.34■■□□□ 1.65
TOM1-213ENST00000465529 KNDC1Q76NI1 1749 aa25.32■■□□□ 1.64
TOM1-213ENST00000465529 C1orf167Q5SNV9 1468 aa25.32■■□□□ 1.64
TOM1-213ENST00000465529 SHPRHQ149N8 1683 aa25.32■■□□□ 1.64
TOM1-213ENST00000465529 LRP6O75581 1613 aa25.31■■□□□ 1.64
TOM1-213ENST00000465529 NRXN1Q9ULB1 1477 aa25.31■■□□□ 1.64
TOM1-213ENST00000465529 MYOM2P54296 1465 aa25.3■■□□□ 1.64
TOM1-213ENST00000465529 LRPPRCP42704 1394 aaKnown RBP25.3■■□□□ 1.64
TOM1-213ENST00000465529 WAPLQ7Z5K2 1190 aa25.29■■□□□ 1.64
TOM1-213ENST00000465529 PLEKHH1Q9ULM0 1364 aa25.29■■□□□ 1.64
TOM1-213ENST00000465529 TECPR2O15040 1411 aa25.29■■□□□ 1.64
TOM1-213ENST00000465529 CFAP70Q5T0N1 1121 aa25.27■■□□□ 1.64
TOM1-213ENST00000465529 HRCP23327 699 aa25.26■■□□□ 1.63
TOM1-213ENST00000465529 ORAI2Q96SN7 254 aa25.26■■□□□ 1.63
TOM1-213ENST00000465529 YTHDC2Q9H6S0 1430 aaKnown RBP25.26■■□□□ 1.63
TOM1-213ENST00000465529 CDC42BPGQ6DT37 1551 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms