RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 SENP3Q9H4L4 574 aaPredicted RBP27.02■■□□□ 1.92
SCAMP3-204ENST00000465312 DMRT2Q9Y5R5 561 aa27.02■■□□□ 1.92
SCAMP3-204ENST00000465312 DHX57Q6P158 1386 aaKnown RBP27.01■■□□□ 1.91
SCAMP3-204ENST00000465312 ARHGAP23Q9P227 1491 aa27■■□□□ 1.91
SCAMP3-204ENST00000465312 RGL3Q3MIN7 710 aa27■■□□□ 1.91
SCAMP3-204ENST00000465312 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.98■■□□□ 1.91
SCAMP3-204ENST00000465312 LTKP29376 864 aa26.97■■□□□ 1.91
SCAMP3-204ENST00000465312 NPHP4O75161 1426 aaPredicted RBP26.97■■□□□ 1.91
SCAMP3-204ENST00000465312 NEURL4Q96JN8 1562 aa26.97■■□□□ 1.91
SCAMP3-204ENST00000465312 IQGAP1P46940 1657 aa26.95■■□□□ 1.9
SCAMP3-204ENST00000465312 ZFYVE9O95405 1425 aa26.93■■□□□ 1.9
SCAMP3-204ENST00000465312 MED14O60244 1454 aa26.89■■□□□ 1.9
SCAMP3-204ENST00000465312 NEUROD1Q13562 356 aa26.89■■□□□ 1.9
SCAMP3-204ENST00000465312 NEXMIFQ5QGS0 1516 aa26.89■■□□□ 1.89
SCAMP3-204ENST00000465312 SPATA31E1Q6ZUB1 1445 aa26.89■■□□□ 1.89
SCAMP3-204ENST00000465312 RPGRIP1LQ68CZ1 1315 aa26.88■■□□□ 1.89
SCAMP3-204ENST00000465312 PLEKHG1Q9ULL1 1385 aa26.85■■□□□ 1.89
SCAMP3-204ENST00000465312 PPLO60437 1756 aa26.85■■□□□ 1.89
SCAMP3-204ENST00000465312 VGFO15240 615 aaPredicted RBP26.85■■□□□ 1.89
SCAMP3-204ENST00000465312 SIN3AQ96ST3 1273 aa26.85■■□□□ 1.89
SCAMP3-204ENST00000465312 SLC26A8Q96RN1 970 aa26.84■■□□□ 1.89
SCAMP3-204ENST00000465312 CCER1Q8TC90 406 aaPredicted RBP26.82■■□□□ 1.88
SCAMP3-204ENST00000465312 KDM2AQ9Y2K7 1162 aa26.79■■□□□ 1.88
SCAMP3-204ENST00000465312 IFT172Q9UG01 1749 aa26.79■■□□□ 1.88
SCAMP3-204ENST00000465312 DCAF11Q8TEB1 546 aa26.78■■□□□ 1.88
SCAMP3-204ENST00000465312 ZNF335Q9H4Z2 1342 aaPredicted RBP26.77■■□□□ 1.88
SCAMP3-204ENST00000465312 ADGRF5Q8IZF2 1346 aa26.74■■□□□ 1.87
SCAMP3-204ENST00000465312 DIP2AQ14689 1571 aa26.72■■□□□ 1.87
SCAMP3-204ENST00000465312 SETBP1Q9Y6X0 1596 aa26.72■■□□□ 1.87
SCAMP3-204ENST00000465312 MYOM2P54296 1465 aa26.7■■□□□ 1.87
SCAMP3-204ENST00000465312 NRXN3Q9Y4C0 1643 aa26.7■■□□□ 1.86
SCAMP3-204ENST00000465312 ADAMTS13Q76LX8 1427 aa26.7■■□□□ 1.86
SCAMP3-204ENST00000465312 TONSLQ96HA7 1378 aa26.7■■□□□ 1.86
SCAMP3-204ENST00000465312 TBX22Q9Y458 520 aa26.69■■□□□ 1.86
SCAMP3-204ENST00000465312 ALKQ9UM73 1620 aa26.65■■□□□ 1.86
SCAMP3-204ENST00000465312 PIK3C2GO75747 1445 aa26.65■■□□□ 1.86
SCAMP3-204ENST00000465312 L3MBTL2Q969R5 705 aa26.64■■□□□ 1.86
SCAMP3-204ENST00000465312 STAC3Q96MF2 364 aa26.63■■□□□ 1.85
SCAMP3-204ENST00000465312 CLSPNQ9HAW4 1339 aa26.63■■□□□ 1.85
SCAMP3-204ENST00000465312 KCNA6P17658 529 aa26.62■■□□□ 1.85
SCAMP3-204ENST00000465312 CPS1P31327 1500 aa26.61■■□□□ 1.85
SCAMP3-204ENST00000465312 LTBP4Q8N2S1 1624 aa26.61■■□□□ 1.85
SCAMP3-204ENST00000465312 STRCP1A6NGW2 1772 aa26.61■■□□□ 1.85
SCAMP3-204ENST00000465312 METP08581 1390 aa26.6■■□□□ 1.85
SCAMP3-204ENST00000465312 PIK3R4Q99570 1358 aa26.59■■□□□ 1.85
SCAMP3-204ENST00000465312 LAMC1P11047 1609 aa26.59■■□□□ 1.85
SCAMP3-204ENST00000465312 CHD2O14647 1828 aaKnown RBP26.59■■□□□ 1.85
SCAMP3-204ENST00000465312 NRXN1Q9ULB1 1477 aa26.59■■□□□ 1.85
SCAMP3-204ENST00000465312 CFAP70Q5T0N1 1121 aa26.58■■□□□ 1.85
SCAMP3-204ENST00000465312 AMOTL2Q9Y2J4 779 aa26.58■■□□□ 1.85
SCAMP3-204ENST00000465312 SETD1AO15047 1707 aaKnown RBP26.57■■□□□ 1.84
SCAMP3-204ENST00000465312 NWD1Q149M9 1564 aa26.56■■□□□ 1.84
SCAMP3-204ENST00000465312 PROSER2Q86WR7 435 aaPredicted RBP26.56■■□□□ 1.84
SCAMP3-204ENST00000465312 CERKQ8TCT0 537 aa26.56■■□□□ 1.84
SCAMP3-204ENST00000465312 TMEM132EQ6IEE7 984 aa26.55■■□□□ 1.84
SCAMP3-204ENST00000465312 C14orf93Q9H972 538 aaKnown RBP26.54■■□□□ 1.84
SCAMP3-204ENST00000465312 STK26Q9P289 416 aa26.54■■□□□ 1.84
SCAMP3-204ENST00000465312 PTPRUQ92729 1446 aa26.54■■□□□ 1.84
SCAMP3-204ENST00000465312 NKTRP30414 1462 aaKnown RBP26.54■■□□□ 1.84
SCAMP3-204ENST00000465312 C14orf37Q86TY3 774 aa26.52■■□□□ 1.84
SCAMP3-204ENST00000465312 PRAG1Q86YV5 1406 aa26.52■■□□□ 1.84
SCAMP3-204ENST00000465312 RBM33Q96EV2 1170 aaKnown RBP26.52■■□□□ 1.84
SCAMP3-204ENST00000465312 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
SCAMP3-204ENST00000465312 XRN1Q8IZH2 1706 aaKnown RBP26.49■■□□□ 1.83
SCAMP3-204ENST00000465312 ASXL1Q8IXJ9 1541 aa26.48■■□□□ 1.83
SCAMP3-204ENST00000465312 TMEM94Q12767 1356 aa26.47■■□□□ 1.83
SCAMP3-204ENST00000465312 YTHDC2Q9H6S0 1430 aaKnown RBP26.46■■□□□ 1.83
SCAMP3-204ENST00000465312 LRPPRCP42704 1394 aaKnown RBP26.45■■□□□ 1.82
SCAMP3-204ENST00000465312 KIAA1210Q9ULL0 1709 aa26.44■■□□□ 1.82
SCAMP3-204ENST00000465312 TRAK1Q9UPV9 953 aa26.41■■□□□ 1.82
SCAMP3-204ENST00000465312 IQSEC2Q5JU85 1478 aa26.41■■□□□ 1.82
SCAMP3-204ENST00000465312 PTCH1Q13635 1447 aa26.4■■□□□ 1.82
SCAMP3-204ENST00000465312 ROCK2O75116 1388 aaKnown RBP26.4■■□□□ 1.82
SCAMP3-204ENST00000465312 ROBO2Q9HCK4 1378 aa26.4■■□□□ 1.82
SCAMP3-204ENST00000465312 TRPM1Q7Z4N2 1603 aa26.39■■□□□ 1.82
SCAMP3-204ENST00000465312 KNDC1Q76NI1 1749 aa26.39■■□□□ 1.82
SCAMP3-204ENST00000465312 XIRP1Q702N8 1843 aaKnown RBP26.39■■□□□ 1.82
SCAMP3-204ENST00000465312 ADGRB1O14514 1584 aa26.39■■□□□ 1.82
SCAMP3-204ENST00000465312 MSH6P52701 1360 aa26.39■■□□□ 1.82
SCAMP3-204ENST00000465312 NBPF1Q3BBV0 1214 aa26.39■■□□□ 1.82
SCAMP3-204ENST00000465312 NBPF8Q3BBV2 869 aa26.39■■□□□ 1.82
SCAMP3-204ENST00000465312 TIMELESSQ9UNS1 1208 aa26.39■■□□□ 1.82
SCAMP3-204ENST00000465312 ABCC11Q96J66 1382 aa26.37■■□□□ 1.81
SCAMP3-204ENST00000465312 UBAP1LF5GYI3 381 aa26.37■■□□□ 1.81
SCAMP3-204ENST00000465312 POGKQ9P215 609 aa26.37■■□□□ 1.81
SCAMP3-204ENST00000465312 SAFB2Q14151 953 aaKnown RBP eCLIP26.36■■□□□ 1.81
SCAMP3-204ENST00000465312 SCAF1Q9H7N4 1312 aaKnown RBP26.36■■□□□ 1.81
SCAMP3-204ENST00000465312 TECPR2O15040 1411 aa26.34■■□□□ 1.81
SCAMP3-204ENST00000465312 WAPLQ7Z5K2 1190 aa26.34■■□□□ 1.81
SCAMP3-204ENST00000465312 PRAM1Q96QH2 718 aa26.33■■□□□ 1.81
SCAMP3-204ENST00000465312 TOM1O60784 492 aa26.32■■□□□ 1.8
SCAMP3-204ENST00000465312 NCOA3Q9Y6Q9 1424 aa26.31■■□□□ 1.8
SCAMP3-204ENST00000465312 ATF3P18847 181 aa26.31■■□□□ 1.8
SCAMP3-204ENST00000465312 PLEKHH1Q9ULM0 1364 aa26.31■■□□□ 1.8
SCAMP3-204ENST00000465312 CARD11Q9BXL7 1154 aa26.3■■□□□ 1.8
SCAMP3-204ENST00000465312 NALCNQ8IZF0 1738 aa26.3■■□□□ 1.8
SCAMP3-204ENST00000465312 RALGAPBQ86X10 1494 aa26.3■■□□□ 1.8
SCAMP3-204ENST00000465312 DLC1Q96QB1 1528 aa26.29■■□□□ 1.8
SCAMP3-204ENST00000465312 PIP4K2BP78356 416 aa26.29■■□□□ 1.8
SCAMP3-204ENST00000465312 C19orf44Q9H6X5 657 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms