RNA–Protein interactions for RNA: ENST00000464586.1

PLD3-208, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-208ENST00000464586 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.14□□□□□ -0.47
PLD3-208ENST00000464586 PPLO60437 1756 aa12.13□□□□□ -0.47
PLD3-208ENST00000464586 LTKP29376 864 aa12.13□□□□□ -0.47
PLD3-208ENST00000464586 ZNF326Q5BKZ1 582 aaKnown RBP12.13□□□□□ -0.47
PLD3-208ENST00000464586 ZFYVE9O95405 1425 aa12.12□□□□□ -0.47
PLD3-208ENST00000464586 PPP1R15AO75807 674 aaPredicted RBP12.11□□□□□ -0.47
PLD3-208ENST00000464586 IFT172Q9UG01 1749 aa12.11□□□□□ -0.47
PLD3-208ENST00000464586 ANKRD30BQ9BXX2 1392 aa12.1□□□□□ -0.47
PLD3-208ENST00000464586 NEXMIFQ5QGS0 1516 aa12.1□□□□□ -0.47
PLD3-208ENST00000464586 RPGRIP1LQ68CZ1 1315 aa12.1□□□□□ -0.47
PLD3-208ENST00000464586 PLEKHG1Q9ULL1 1385 aa12.09□□□□□ -0.47
PLD3-208ENST00000464586 BCANQ96GW7 911 aa12.09□□□□□ -0.47
PLD3-208ENST00000464586 ILDR1Q86SU0 546 aaPredicted RBP12.08□□□□□ -0.48
PLD3-208ENST00000464586 CHD2O14647 1828 aaKnown RBP12.08□□□□□ -0.48
PLD3-208ENST00000464586 SPATA31E1Q6ZUB1 1445 aa12.07□□□□□ -0.48
PLD3-208ENST00000464586 PCGF6Q9BYE7 350 aa12.07□□□□□ -0.48
PLD3-208ENST00000464586 DIP2AQ14689 1571 aa12.06□□□□□ -0.48
PLD3-208ENST00000464586 STRCP1A6NGW2 1772 aa12.06□□□□□ -0.48
PLD3-208ENST00000464586 VGFO15240 615 aaPredicted RBP12.06□□□□□ -0.48
PLD3-208ENST00000464586 RGL3Q3MIN7 710 aa12.06□□□□□ -0.48
PLD3-208ENST00000464586 NUTM2DQ5VT03 806 aaPredicted RBP12.06□□□□□ -0.48
PLD3-208ENST00000464586 LTBP4Q8N2S1 1624 aa12.06□□□□□ -0.48
PLD3-208ENST00000464586 ZNF335Q9H4Z2 1342 aaPredicted RBP12.05□□□□□ -0.48
PLD3-208ENST00000464586 SETBP1Q9Y6X0 1596 aa12.05□□□□□ -0.48
PLD3-208ENST00000464586 NRXN3Q9Y4C0 1643 aa12.04□□□□□ -0.48
PLD3-208ENST00000464586 SLC26A8Q96RN1 970 aa12.04□□□□□ -0.48
PLD3-208ENST00000464586 CPS1P31327 1500 aa12.04□□□□□ -0.48
PLD3-208ENST00000464586 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
PLD3-208ENST00000464586 TBX22Q9Y458 520 aa12.03□□□□□ -0.48
PLD3-208ENST00000464586 CERKQ8TCT0 537 aa12.02□□□□□ -0.49
PLD3-208ENST00000464586 SENP3Q9H4L4 574 aaPredicted RBP12.02□□□□□ -0.49
PLD3-208ENST00000464586 ADAMTS13Q76LX8 1427 aa12.02□□□□□ -0.49
PLD3-208ENST00000464586 SETD1AO15047 1707 aaKnown RBP12.01□□□□□ -0.49
PLD3-208ENST00000464586 PIK3R4Q99570 1358 aa12.01□□□□□ -0.49
PLD3-208ENST00000464586 IQSEC2Q5JU85 1478 aa12.01□□□□□ -0.49
PLD3-208ENST00000464586 NWD1Q149M9 1564 aa12.01□□□□□ -0.49
PLD3-208ENST00000464586 KCNA6P17658 529 aa12□□□□□ -0.49
PLD3-208ENST00000464586 STAC3Q96MF2 364 aa12□□□□□ -0.49
PLD3-208ENST00000464586 ALKQ9UM73 1620 aa12□□□□□ -0.49
PLD3-208ENST00000464586 XIRP1Q702N8 1843 aaKnown RBP12□□□□□ -0.49
PLD3-208ENST00000464586 MYOM2P54296 1465 aa11.99□□□□□ -0.49
PLD3-208ENST00000464586 LAMC1P11047 1609 aa11.99□□□□□ -0.49
PLD3-208ENST00000464586 ADGRF5Q8IZF2 1346 aa11.98□□□□□ -0.49
PLD3-208ENST00000464586 NKTRP30414 1462 aaKnown RBP11.97□□□□□ -0.49
PLD3-208ENST00000464586 DCAF11Q8TEB1 546 aa11.96□□□□□ -0.49
PLD3-208ENST00000464586 SIN3AQ96ST3 1273 aa11.96□□□□□ -0.49
PLD3-208ENST00000464586 XRN1Q8IZH2 1706 aaKnown RBP11.96□□□□□ -0.49
PLD3-208ENST00000464586 LRRC7Q96NW7 1537 aa11.96□□□□□ -0.5
PLD3-208ENST00000464586 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
PLD3-208ENST00000464586 PIK3C2GO75747 1445 aa11.95□□□□□ -0.5
PLD3-208ENST00000464586 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
PLD3-208ENST00000464586 PROSER2Q86WR7 435 aaPredicted RBP11.95□□□□□ -0.5
PLD3-208ENST00000464586 AMOTL2Q9Y2J4 779 aa11.95□□□□□ -0.5
PLD3-208ENST00000464586 KDM2AQ9Y2K7 1162 aa11.95□□□□□ -0.5
PLD3-208ENST00000464586 KIAA1210Q9ULL0 1709 aa11.94□□□□□ -0.5
PLD3-208ENST00000464586 KNDC1Q76NI1 1749 aa11.94□□□□□ -0.5
PLD3-208ENST00000464586 METP08581 1390 aa11.93□□□□□ -0.5
PLD3-208ENST00000464586 PTPRUQ92729 1446 aa11.93□□□□□ -0.5
PLD3-208ENST00000464586 C14orf93Q9H972 538 aaKnown RBP11.92□□□□□ -0.5
PLD3-208ENST00000464586 CLSPNQ9HAW4 1339 aa11.91□□□□□ -0.5
PLD3-208ENST00000464586 FBXO41Q8TF61 875 aa11.91□□□□□ -0.5
PLD3-208ENST00000464586 NCOA3Q9Y6Q9 1424 aa11.91□□□□□ -0.5
PLD3-208ENST00000464586 TMEM94Q12767 1356 aa11.91□□□□□ -0.5
PLD3-208ENST00000464586 CFAP70Q5T0N1 1121 aa11.9□□□□□ -0.5
PLD3-208ENST00000464586 L3MBTL2Q969R5 705 aa11.9□□□□□ -0.5
PLD3-208ENST00000464586 ASXL1Q8IXJ9 1541 aa11.9□□□□□ -0.5
PLD3-208ENST00000464586 TONSLQ96HA7 1378 aa11.9□□□□□ -0.5
PLD3-208ENST00000464586 TOM1O60784 492 aa11.89□□□□□ -0.51
PLD3-208ENST00000464586 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.89□□□□□ -0.51
PLD3-208ENST00000464586 PTCH1Q13635 1447 aa11.88□□□□□ -0.51
PLD3-208ENST00000464586 PRAG1Q86YV5 1406 aa11.88□□□□□ -0.51
PLD3-208ENST00000464586 UBAP1LF5GYI3 381 aa11.88□□□□□ -0.51
PLD3-208ENST00000464586 TMEM132EQ6IEE7 984 aa11.88□□□□□ -0.51
PLD3-208ENST00000464586 C14orf37Q86TY3 774 aa11.88□□□□□ -0.51
PLD3-208ENST00000464586 CCER1Q8TC90 406 aaPredicted RBP11.88□□□□□ -0.51
PLD3-208ENST00000464586 LRPPRCP42704 1394 aaKnown RBP11.88□□□□□ -0.51
PLD3-208ENST00000464586 MSH6P52701 1360 aa11.88□□□□□ -0.51
PLD3-208ENST00000464586 YTHDC2Q9H6S0 1430 aaKnown RBP11.87□□□□□ -0.51
PLD3-208ENST00000464586 NALCNQ8IZF0 1738 aa11.87□□□□□ -0.51
PLD3-208ENST00000464586 ABCC11Q96J66 1382 aa11.87□□□□□ -0.51
PLD3-208ENST00000464586 TECPR2O15040 1411 aa11.86□□□□□ -0.51
PLD3-208ENST00000464586 TRPM1Q7Z4N2 1603 aa11.86□□□□□ -0.51
PLD3-208ENST00000464586 RBM33Q96EV2 1170 aaKnown RBP11.86□□□□□ -0.51
PLD3-208ENST00000464586 STK26Q9P289 416 aa11.86□□□□□ -0.51
PLD3-208ENST00000464586 ADGRB1O14514 1584 aa11.86□□□□□ -0.51
PLD3-208ENST00000464586 C19orf44Q9H6X5 657 aa11.85□□□□□ -0.51
PLD3-208ENST00000464586 DLC1Q96QB1 1528 aa11.85□□□□□ -0.51
PLD3-208ENST00000464586 ROBO2Q9HCK4 1378 aa11.84□□□□□ -0.51
PLD3-208ENST00000464586 ARHGEF28Q8N1W1 1705 aaKnown RBP11.84□□□□□ -0.51
PLD3-208ENST00000464586 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
PLD3-208ENST00000464586 TIMELESSQ9UNS1 1208 aa11.83□□□□□ -0.52
PLD3-208ENST00000464586 DCCP43146 1447 aa11.83□□□□□ -0.52
PLD3-208ENST00000464586 FAM135BQ49AJ0 1406 aa11.83□□□□□ -0.52
PLD3-208ENST00000464586 ADGRL3Q9HAR2 1447 aa11.83□□□□□ -0.52
PLD3-208ENST00000464586 ATF3P18847 181 aa11.82□□□□□ -0.52
PLD3-208ENST00000464586 CADPS2Q86UW7 1296 aa11.82□□□□□ -0.52
PLD3-208ENST00000464586 SCAF1Q9H7N4 1312 aaKnown RBP11.82□□□□□ -0.52
PLD3-208ENST00000464586 PIP4K2BP78356 416 aa11.81□□□□□ -0.52
PLD3-208ENST00000464586 TRAK1Q9UPV9 953 aa11.81□□□□□ -0.52
PLD3-208ENST00000464586 NBPF1Q3BBV0 1214 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms