RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 UBAP1LF5GYI3 381 aa27.62■■■□□ 2.01
HMG20B-208ENST00000464304 ANKLE2Q86XL3 938 aa27.62■■■□□ 2.01
HMG20B-208ENST00000464304 SCAF11Q99590 1463 aaKnown RBP27.62■■■□□ 2.01
HMG20B-208ENST00000464304 CCDC144AA2RUR9 1427 aa27.61■■■□□ 2.01
HMG20B-208ENST00000464304 ZFYVE9O95405 1425 aa27.59■■■□□ 2.01
HMG20B-208ENST00000464304 MED14O60244 1454 aa27.59■■■□□ 2.01
HMG20B-208ENST00000464304 PCGF6Q9BYE7 350 aa27.59■■■□□ 2.01
HMG20B-208ENST00000464304 LTKP29376 864 aa27.58■■■□□ 2.01
HMG20B-208ENST00000464304 RIMS2Q9UQ26 1411 aa27.58■■■□□ 2
HMG20B-208ENST00000464304 TXNDC2Q86VQ3 553 aa27.57■■■□□ 2
HMG20B-208ENST00000464304 ANKRD30BQ9BXX2 1392 aa27.57■■■□□ 2
HMG20B-208ENST00000464304 NPHP4O75161 1426 aaPredicted RBP27.57■■■□□ 2
HMG20B-208ENST00000464304 PPLO60437 1756 aa27.55■■■□□ 2
HMG20B-208ENST00000464304 NEXMIFQ5QGS0 1516 aa27.54■■■□□ 2
HMG20B-208ENST00000464304 EID1Q9Y6B2 187 aa27.54■■■□□ 2
HMG20B-208ENST00000464304 IFT172Q9UG01 1749 aa27.52■■■□□ 2
HMG20B-208ENST00000464304 ZNF326Q5BKZ1 582 aaKnown RBP27.51■■□□□ 1.99
HMG20B-208ENST00000464304 SPATA31E1Q6ZUB1 1445 aa27.5■■□□□ 1.99
HMG20B-208ENST00000464304 DHX57Q6P158 1386 aaKnown RBP27.5■■□□□ 1.99
HMG20B-208ENST00000464304 NUTM2DQ5VT03 806 aaPredicted RBP27.49■■□□□ 1.99
HMG20B-208ENST00000464304 MED1Q15648 1581 aaPredicted RBP27.48■■□□□ 1.99
HMG20B-208ENST00000464304 PPP1R15AO75807 674 aaPredicted RBP27.45■■□□□ 1.98
HMG20B-208ENST00000464304 HDGFP51858 240 aaKnown RBP27.45■■□□□ 1.98
HMG20B-208ENST00000464304 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.45■■□□□ 1.98
HMG20B-208ENST00000464304 PLEKHG1Q9ULL1 1385 aa27.44■■□□□ 1.98
HMG20B-208ENST00000464304 HSPA1LP34931 641 aa27.43■■□□□ 1.98
HMG20B-208ENST00000464304 NRXN3Q9Y4C0 1643 aa27.42■■□□□ 1.98
HMG20B-208ENST00000464304 SENP3Q9H4L4 574 aaPredicted RBP27.42■■□□□ 1.98
HMG20B-208ENST00000464304 STRCP1A6NGW2 1772 aa27.41■■□□□ 1.98
HMG20B-208ENST00000464304 RGL3Q3MIN7 710 aa27.41■■□□□ 1.98
HMG20B-208ENST00000464304 ALKQ9UM73 1620 aa27.39■■□□□ 1.98
HMG20B-208ENST00000464304 PIP4K2BP78356 416 aa27.39■■□□□ 1.98
HMG20B-208ENST00000464304 RPGRIP1LQ68CZ1 1315 aa27.39■■□□□ 1.97
HMG20B-208ENST00000464304 SCAF1Q9H7N4 1312 aaKnown RBP27.39■■□□□ 1.97
HMG20B-208ENST00000464304 SETBP1Q9Y6X0 1596 aa27.38■■□□□ 1.97
HMG20B-208ENST00000464304 BCANQ96GW7 911 aa27.37■■□□□ 1.97
HMG20B-208ENST00000464304 DIP2AQ14689 1571 aa27.35■■□□□ 1.97
HMG20B-208ENST00000464304 ADAMTS13Q76LX8 1427 aa27.35■■□□□ 1.97
HMG20B-208ENST00000464304 SLC26A8Q96RN1 970 aa27.35■■□□□ 1.97
HMG20B-208ENST00000464304 SETD1AO15047 1707 aaKnown RBP27.34■■□□□ 1.97
HMG20B-208ENST00000464304 CHD2O14647 1828 aaKnown RBP27.34■■□□□ 1.97
HMG20B-208ENST00000464304 VGFO15240 615 aaPredicted RBP27.31■■□□□ 1.96
HMG20B-208ENST00000464304 CPS1P31327 1500 aa27.31■■□□□ 1.96
HMG20B-208ENST00000464304 SIN3AQ96ST3 1273 aa27.29■■□□□ 1.96
HMG20B-208ENST00000464304 MYOM2P54296 1465 aa27.28■■□□□ 1.96
HMG20B-208ENST00000464304 NWD1Q149M9 1564 aa27.27■■□□□ 1.96
HMG20B-208ENST00000464304 ADGRF5Q8IZF2 1346 aa27.27■■□□□ 1.96
HMG20B-208ENST00000464304 TBX22Q9Y458 520 aa27.26■■□□□ 1.95
HMG20B-208ENST00000464304 NRXN1Q9ULB1 1477 aa27.23■■□□□ 1.95
HMG20B-208ENST00000464304 XIRP1Q702N8 1843 aaKnown RBP27.23■■□□□ 1.95
HMG20B-208ENST00000464304 PIK3C2GO75747 1445 aa27.22■■□□□ 1.95
HMG20B-208ENST00000464304 TOM1O60784 492 aa27.21■■□□□ 1.95
HMG20B-208ENST00000464304 NEUROD1Q13562 356 aa27.21■■□□□ 1.95
HMG20B-208ENST00000464304 XRN1Q8IZH2 1706 aaKnown RBP27.2■■□□□ 1.94
HMG20B-208ENST00000464304 DCAF11Q8TEB1 546 aa27.2■■□□□ 1.94
HMG20B-208ENST00000464304 LAMC1P11047 1609 aa27.19■■□□□ 1.94
HMG20B-208ENST00000464304 PIK3R4Q99570 1358 aa27.19■■□□□ 1.94
HMG20B-208ENST00000464304 PTPRUQ92729 1446 aa27.18■■□□□ 1.94
HMG20B-208ENST00000464304 KCNA6P17658 529 aa27.18■■□□□ 1.94
HMG20B-208ENST00000464304 KDM2AQ9Y2K7 1162 aa27.18■■□□□ 1.94
HMG20B-208ENST00000464304 METP08581 1390 aa27.18■■□□□ 1.94
HMG20B-208ENST00000464304 LRRC7Q96NW7 1537 aa27.16■■□□□ 1.94
HMG20B-208ENST00000464304 NKTRP30414 1462 aaKnown RBP27.16■■□□□ 1.94
HMG20B-208ENST00000464304 ASXL1Q8IXJ9 1541 aa27.15■■□□□ 1.94
HMG20B-208ENST00000464304 L3MBTL2Q969R5 705 aa27.11■■□□□ 1.93
HMG20B-208ENST00000464304 STAC3Q96MF2 364 aa27.1■■□□□ 1.93
HMG20B-208ENST00000464304 AMOTL2Q9Y2J4 779 aa27.09■■□□□ 1.93
HMG20B-208ENST00000464304 KNDC1Q76NI1 1749 aa27.09■■□□□ 1.93
HMG20B-208ENST00000464304 KIAA1210Q9ULL0 1709 aa27.08■■□□□ 1.93
HMG20B-208ENST00000464304 CFAP70Q5T0N1 1121 aa27.08■■□□□ 1.93
HMG20B-208ENST00000464304 PHF23Q9BUL5 403 aaPredicted RBP27.08■■□□□ 1.93
HMG20B-208ENST00000464304 C14orf93Q9H972 538 aaKnown RBP27.08■■□□□ 1.93
HMG20B-208ENST00000464304 PROSER2Q86WR7 435 aaPredicted RBP27.05■■□□□ 1.92
HMG20B-208ENST00000464304 CLSPNQ9HAW4 1339 aa27.05■■□□□ 1.92
HMG20B-208ENST00000464304 TMEM94Q12767 1356 aa27.05■■□□□ 1.92
HMG20B-208ENST00000464304 PRAG1Q86YV5 1406 aa27.05■■□□□ 1.92
HMG20B-208ENST00000464304 CCER1Q8TC90 406 aaPredicted RBP27.04■■□□□ 1.92
HMG20B-208ENST00000464304 TONSLQ96HA7 1378 aa27.04■■□□□ 1.92
HMG20B-208ENST00000464304 ADGRB1O14514 1584 aa27.03■■□□□ 1.92
HMG20B-208ENST00000464304 TMEM132EQ6IEE7 984 aa27.03■■□□□ 1.92
HMG20B-208ENST00000464304 RBM33Q96EV2 1170 aaKnown RBP27.03■■□□□ 1.92
HMG20B-208ENST00000464304 TRPM1Q7Z4N2 1603 aa27.01■■□□□ 1.91
HMG20B-208ENST00000464304 RGS17Q9UGC6 210 aaPredicted RBP27■■□□□ 1.91
HMG20B-208ENST00000464304 PTCH1Q13635 1447 aa26.99■■□□□ 1.91
HMG20B-208ENST00000464304 YTHDC2Q9H6S0 1430 aaKnown RBP26.99■■□□□ 1.91
HMG20B-208ENST00000464304 LRPPRCP42704 1394 aaKnown RBP26.99■■□□□ 1.91
HMG20B-208ENST00000464304 NALCNQ8IZF0 1738 aa26.99■■□□□ 1.91
HMG20B-208ENST00000464304 ROBO2Q9HCK4 1378 aa26.97■■□□□ 1.91
HMG20B-208ENST00000464304 TECPR2O15040 1411 aa26.97■■□□□ 1.91
HMG20B-208ENST00000464304 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.96■■□□□ 1.91
HMG20B-208ENST00000464304 STK26Q9P289 416 aa26.96■■□□□ 1.91
HMG20B-208ENST00000464304 ABCC11Q96J66 1382 aa26.94■■□□□ 1.9
HMG20B-208ENST00000464304 ARHGEF28Q8N1W1 1705 aaKnown RBP26.93■■□□□ 1.9
HMG20B-208ENST00000464304 NCOA3Q9Y6Q9 1424 aa26.93■■□□□ 1.9
HMG20B-208ENST00000464304 DLC1Q96QB1 1528 aa26.9■■□□□ 1.9
HMG20B-208ENST00000464304 MSH6P52701 1360 aa26.9■■□□□ 1.9
HMG20B-208ENST00000464304 NBPF8Q3BBV2 869 aa26.9■■□□□ 1.9
HMG20B-208ENST00000464304 NBPF1Q3BBV0 1214 aa26.89■■□□□ 1.9
HMG20B-208ENST00000464304 C14orf37Q86TY3 774 aa26.89■■□□□ 1.9
HMG20B-208ENST00000464304 ADGRL3Q9HAR2 1447 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms