RNA–Protein interactions for RNA: ENST00000464115.1

SNHG12-203, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 3

Gene SNHG12, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-203ENST00000464115 TOM1O60784 492 aa27.45■■□□□ 1.98
SNHG12-203ENST00000464115 CHGAP10645 457 aaKnown RBP27.45■■□□□ 1.98
SNHG12-203ENST00000464115 HDGFP51858 240 aaKnown RBP27.45■■□□□ 1.98
SNHG12-203ENST00000464115 KCNA6P17658 529 aa27.44■■□□□ 1.98
SNHG12-203ENST00000464115 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.43■■□□□ 1.98
SNHG12-203ENST00000464115 TRIM52Q96A61 297 aa27.4■■□□□ 1.98
SNHG12-203ENST00000464115 PPP1R15AO75807 674 aaPredicted RBP27.39■■□□□ 1.98
SNHG12-203ENST00000464115 TRPM2O94759 1503 aa27.39■■□□□ 1.98
SNHG12-203ENST00000464115 XIRP1Q702N8 1843 aaKnown RBP27.39■■□□□ 1.97
SNHG12-203ENST00000464115 NUTM2DQ5VT03 806 aaPredicted RBP27.38■■□□□ 1.97
SNHG12-203ENST00000464115 NWD1Q149M9 1564 aa27.38■■□□□ 1.97
SNHG12-203ENST00000464115 PIP4K2BP78356 416 aa27.37■■□□□ 1.97
SNHG12-203ENST00000464115 ADAMTS13Q76LX8 1427 aa27.37■■□□□ 1.97
SNHG12-203ENST00000464115 BCANQ96GW7 911 aa27.37■■□□□ 1.97
SNHG12-203ENST00000464115 TBX22Q9Y458 520 aa27.37■■□□□ 1.97
SNHG12-203ENST00000464115 SENP3Q9H4L4 574 aaPredicted RBP27.36■■□□□ 1.97
SNHG12-203ENST00000464115 CLTCL1P53675 1640 aa27.36■■□□□ 1.97
SNHG12-203ENST00000464115 SLC4A1APQ9BWU0 796 aaKnown RBP27.34■■□□□ 1.97
SNHG12-203ENST00000464115 TMEM94Q12767 1356 aa27.34■■□□□ 1.97
SNHG12-203ENST00000464115 NKTRP30414 1462 aaKnown RBP27.32■■□□□ 1.96
SNHG12-203ENST00000464115 HSPA1LP34931 641 aa27.31■■□□□ 1.96
SNHG12-203ENST00000464115 SCAF1Q9H7N4 1312 aaKnown RBP27.31■■□□□ 1.96
SNHG12-203ENST00000464115 CHD2O14647 1828 aaKnown RBP27.3■■□□□ 1.96
SNHG12-203ENST00000464115 PROSER2Q86WR7 435 aaPredicted RBP27.29■■□□□ 1.96
SNHG12-203ENST00000464115 DIP2AQ14689 1571 aa27.29■■□□□ 1.96
SNHG12-203ENST00000464115 RBM33Q96EV2 1170 aaKnown RBP27.27■■□□□ 1.96
SNHG12-203ENST00000464115 PIK3R4Q99570 1358 aa27.26■■□□□ 1.95
SNHG12-203ENST00000464115 NEXMIFQ5QGS0 1516 aa27.26■■□□□ 1.95
SNHG12-203ENST00000464115 ZNF326Q5BKZ1 582 aaKnown RBP27.25■■□□□ 1.95
SNHG12-203ENST00000464115 NRXN3Q9Y4C0 1643 aa27.25■■□□□ 1.95
SNHG12-203ENST00000464115 SETBP1Q9Y6X0 1596 aa27.24■■□□□ 1.95
SNHG12-203ENST00000464115 FOXD1Q16676 465 aa27.24■■□□□ 1.95
SNHG12-203ENST00000464115 MPHOSPH9Q99550 1183 aa27.23■■□□□ 1.95
SNHG12-203ENST00000464115 SETD5Q9C0A6 1442 aa27.23■■□□□ 1.95
SNHG12-203ENST00000464115 KIF1BO60333 1816 aa27.21■■□□□ 1.95
SNHG12-203ENST00000464115 PTPRUQ92729 1446 aa27.21■■□□□ 1.95
SNHG12-203ENST00000464115 NCOA3Q9Y6Q9 1424 aa27.17■■□□□ 1.94
SNHG12-203ENST00000464115 DISP3Q9P2K9 1392 aa27.17■■□□□ 1.94
SNHG12-203ENST00000464115 ACIN1Q9UKV3 1341 aaKnown RBP27.16■■□□□ 1.94
SNHG12-203ENST00000464115 FAM135BQ49AJ0 1406 aa27.16■■□□□ 1.94
SNHG12-203ENST00000464115 AMOTL2Q9Y2J4 779 aa27.16■■□□□ 1.94
SNHG12-203ENST00000464115 METP08581 1390 aa27.15■■□□□ 1.94
SNHG12-203ENST00000464115 RPGRIP1LQ68CZ1 1315 aa27.15■■□□□ 1.94
SNHG12-203ENST00000464115 MSH6P52701 1360 aa27.14■■□□□ 1.94
SNHG12-203ENST00000464115 RAB3GAP2Q9H2M9 1393 aa27.13■■□□□ 1.93
SNHG12-203ENST00000464115 XRN1Q8IZH2 1706 aaKnown RBP27.11■■□□□ 1.93
SNHG12-203ENST00000464115 VGFO15240 615 aaPredicted RBP27.11■■□□□ 1.93
SNHG12-203ENST00000464115 CCDC144AA2RUR9 1427 aa27.1■■□□□ 1.93
SNHG12-203ENST00000464115 SPATA31E1Q6ZUB1 1445 aa27.1■■□□□ 1.93
SNHG12-203ENST00000464115 SLAIN2Q9P270 581 aa27.08■■□□□ 1.93
SNHG12-203ENST00000464115 PPLO60437 1756 aa27.07■■□□□ 1.92
SNHG12-203ENST00000464115 C19orf44Q9H6X5 657 aa27.06■■□□□ 1.92
SNHG12-203ENST00000464115 ROBO1Q9Y6N7 1651 aa27.05■■□□□ 1.92
SNHG12-203ENST00000464115 SETD1AO15047 1707 aaKnown RBP27.04■■□□□ 1.92
SNHG12-203ENST00000464115 ILDR2Q71H61 639 aa27.03■■□□□ 1.92
SNHG12-203ENST00000464115 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.02■■□□□ 1.92
SNHG12-203ENST00000464115 HRCP23327 699 aa27.01■■□□□ 1.91
SNHG12-203ENST00000464115 C14orf37Q86TY3 774 aa27.01■■□□□ 1.91
SNHG12-203ENST00000464115 MED1Q15648 1581 aaPredicted RBP27.01■■□□□ 1.91
SNHG12-203ENST00000464115 ADGRF5Q8IZF2 1346 aa26.99■■□□□ 1.91
SNHG12-203ENST00000464115 RGL3Q3MIN7 710 aa26.99■■□□□ 1.91
SNHG12-203ENST00000464115 CADPS2Q86UW7 1296 aa26.99■■□□□ 1.91
SNHG12-203ENST00000464115 PRAG1Q86YV5 1406 aa26.98■■□□□ 1.91
SNHG12-203ENST00000464115 DCCP43146 1447 aa26.97■■□□□ 1.91
SNHG12-203ENST00000464115 IFT172Q9UG01 1749 aa26.96■■□□□ 1.91
SNHG12-203ENST00000464115 ANKRD30BQ9BXX2 1392 aa26.96■■□□□ 1.91
SNHG12-203ENST00000464115 ATF3P18847 181 aa26.95■■□□□ 1.9
SNHG12-203ENST00000464115 PTCH1Q13635 1447 aa26.94■■□□□ 1.9
SNHG12-203ENST00000464115 ROBO2Q9HCK4 1378 aa26.93■■□□□ 1.9
SNHG12-203ENST00000464115 ADGRL3Q9HAR2 1447 aa26.91■■□□□ 1.9
SNHG12-203ENST00000464115 PIK3C2GO75747 1445 aa26.9■■□□□ 1.9
SNHG12-203ENST00000464115 MST1RQ04912 1400 aa26.88■■□□□ 1.89
SNHG12-203ENST00000464115 NALCNQ8IZF0 1738 aa26.87■■□□□ 1.89
SNHG12-203ENST00000464115 BRINP3Q76B58 766 aa26.86■■□□□ 1.89
SNHG12-203ENST00000464115 NRXN1Q9ULB1 1477 aa26.86■■□□□ 1.89
SNHG12-203ENST00000464115 PHLPP1O60346 1717 aa26.85■■□□□ 1.89
SNHG12-203ENST00000464115 COL16A1Q07092 1604 aaPredicted RBP26.84■■□□□ 1.89
SNHG12-203ENST00000464115 ASXL1Q8IXJ9 1541 aa26.84■■□□□ 1.89
SNHG12-203ENST00000464115 AHDC1Q5TGY3 1603 aaPredicted RBP26.83■■□□□ 1.89
SNHG12-203ENST00000464115 MYOM2P54296 1465 aa26.82■■□□□ 1.88
SNHG12-203ENST00000464115 TECPR2O15040 1411 aa26.82■■□□□ 1.88
SNHG12-203ENST00000464115 C14orf93Q9H972 538 aaKnown RBP26.8■■□□□ 1.88
SNHG12-203ENST00000464115 LRPPRCP42704 1394 aaKnown RBP26.8■■□□□ 1.88
SNHG12-203ENST00000464115 TMEM132EQ6IEE7 984 aa26.79■■□□□ 1.88
SNHG12-203ENST00000464115 ABCC11Q96J66 1382 aa26.79■■□□□ 1.88
SNHG12-203ENST00000464115 JCADQ9P266 1359 aa26.79■■□□□ 1.88
SNHG12-203ENST00000464115 RGS17Q9UGC6 210 aaPredicted RBP26.76■■□□□ 1.87
SNHG12-203ENST00000464115 C1orf167Q5SNV9 1468 aa26.75■■□□□ 1.87
SNHG12-203ENST00000464115 SOCS7O14512 581 aa26.75■■□□□ 1.87
SNHG12-203ENST00000464115 PHF23Q9BUL5 403 aaPredicted RBP26.75■■□□□ 1.87
SNHG12-203ENST00000464115 STK26Q9P289 416 aa26.75■■□□□ 1.87
SNHG12-203ENST00000464115 CFAP70Q5T0N1 1121 aa26.74■■□□□ 1.87
SNHG12-203ENST00000464115 YTHDC2Q9H6S0 1430 aaKnown RBP26.73■■□□□ 1.87
SNHG12-203ENST00000464115 WAPLQ7Z5K2 1190 aa26.73■■□□□ 1.87
SNHG12-203ENST00000464115 KNDC1Q76NI1 1749 aa26.72■■□□□ 1.87
SNHG12-203ENST00000464115 NHSL1Q5SYE7 1610 aa26.72■■□□□ 1.87
SNHG12-203ENST00000464115 PLEKHH1Q9ULM0 1364 aa26.71■■□□□ 1.87
SNHG12-203ENST00000464115 SIRT1Q96EB6 747 aa26.7■■□□□ 1.86
SNHG12-203ENST00000464115 DHX57Q6P158 1386 aaKnown RBP26.7■■□□□ 1.86
SNHG12-203ENST00000464115 LAMC1P11047 1609 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms