RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 RIMS2Q9UQ26 1411 aa33.64■■■□□ 2.98
PDLIM7-206ENST00000463411 XIRP1Q702N8 1843 aaKnown RBP33.64■■■□□ 2.98
PDLIM7-206ENST00000463411 PPP1R15AO75807 674 aaPredicted RBP33.63■■■□□ 2.97
PDLIM7-206ENST00000463411 CHGAP10645 457 aaKnown RBP33.63■■■□□ 2.97
PDLIM7-206ENST00000463411 SLC26A8Q96RN1 970 aa33.63■■■□□ 2.97
PDLIM7-206ENST00000463411 SPHKAPQ2M3C7 1700 aa33.61■■■□□ 2.97
PDLIM7-206ENST00000463411 PLEKHG1Q9ULL1 1385 aa33.6■■■□□ 2.97
PDLIM7-206ENST00000463411 HSPA1LP34931 641 aa33.6■■■□□ 2.97
PDLIM7-206ENST00000463411 NWD1Q149M9 1564 aa33.59■■■□□ 2.97
PDLIM7-206ENST00000463411 KCNA6P17658 529 aa33.58■■■□□ 2.97
PDLIM7-206ENST00000463411 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.57■■■□□ 2.96
PDLIM7-206ENST00000463411 NKTRP30414 1462 aaKnown RBP33.56■■■□□ 2.96
PDLIM7-206ENST00000463411 NAIPQ13075 1403 aa33.56■■■□□ 2.96
PDLIM7-206ENST00000463411 TMEM94Q12767 1356 aa33.52■■■□□ 2.96
PDLIM7-206ENST00000463411 SENP3Q9H4L4 574 aaPredicted RBP33.51■■■□□ 2.95
PDLIM7-206ENST00000463411 CHD2O14647 1828 aaKnown RBP33.49■■■□□ 2.95
PDLIM7-206ENST00000463411 DIP2AQ14689 1571 aa33.49■■■□□ 2.95
PDLIM7-206ENST00000463411 PROSER2Q86WR7 435 aaPredicted RBP33.49■■■□□ 2.95
PDLIM7-206ENST00000463411 HFM1A2PYH4 1435 aa33.48■■■□□ 2.95
PDLIM7-206ENST00000463411 NUTM2DQ5VT03 806 aaPredicted RBP33.43■■■□□ 2.94
PDLIM7-206ENST00000463411 TRPM2O94759 1503 aa33.43■■■□□ 2.94
PDLIM7-206ENST00000463411 MED1Q15648 1581 aaPredicted RBP33.43■■■□□ 2.94
PDLIM7-206ENST00000463411 TBX22Q9Y458 520 aa33.42■■■□□ 2.94
PDLIM7-206ENST00000463411 CLTCL1P53675 1640 aa33.4■■■□□ 2.94
PDLIM7-206ENST00000463411 ILDR2Q71H61 639 aa33.4■■■□□ 2.94
PDLIM7-206ENST00000463411 ADAMTS13Q76LX8 1427 aa33.39■■■□□ 2.94
PDLIM7-206ENST00000463411 MSH6P52701 1360 aa33.38■■■□□ 2.93
PDLIM7-206ENST00000463411 TRIM52Q96A61 297 aa33.38■■■□□ 2.93
PDLIM7-206ENST00000463411 KIF1BO60333 1816 aa33.37■■■□□ 2.93
PDLIM7-206ENST00000463411 RBM33Q96EV2 1170 aaKnown RBP33.37■■■□□ 2.93
PDLIM7-206ENST00000463411 PIK3R4Q99570 1358 aa33.36■■■□□ 2.93
PDLIM7-206ENST00000463411 ZNF326Q5BKZ1 582 aaKnown RBP33.36■■■□□ 2.93
PDLIM7-206ENST00000463411 FAM135BQ49AJ0 1406 aa33.34■■■□□ 2.93
PDLIM7-206ENST00000463411 ROBO1Q9Y6N7 1651 aa33.33■■■□□ 2.93
PDLIM7-206ENST00000463411 SETBP1Q9Y6X0 1596 aa33.31■■■□□ 2.92
PDLIM7-206ENST00000463411 NRXN3Q9Y4C0 1643 aa33.29■■■□□ 2.92
PDLIM7-206ENST00000463411 NCOA3Q9Y6Q9 1424 aa33.28■■■□□ 2.92
PDLIM7-206ENST00000463411 SLC4A1APQ9BWU0 796 aaKnown RBP33.27■■■□□ 2.92
PDLIM7-206ENST00000463411 NEXMIFQ5QGS0 1516 aa33.27■■■□□ 2.92
PDLIM7-206ENST00000463411 C14orf37Q86TY3 774 aa33.25■■■□□ 2.91
PDLIM7-206ENST00000463411 SOCS7O14512 581 aa33.21■■■□□ 2.91
PDLIM7-206ENST00000463411 PHF23Q9BUL5 403 aaPredicted RBP33.21■■■□□ 2.91
PDLIM7-206ENST00000463411 XRN1Q8IZH2 1706 aaKnown RBP33.2■■■□□ 2.91
PDLIM7-206ENST00000463411 AMOTL2Q9Y2J4 779 aa33.2■■■□□ 2.91
PDLIM7-206ENST00000463411 PTPRUQ92729 1446 aa33.19■■■□□ 2.9
PDLIM7-206ENST00000463411 SLAIN2Q9P270 581 aa33.18■■■□□ 2.9
PDLIM7-206ENST00000463411 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.18■■■□□ 2.9
PDLIM7-206ENST00000463411 PHLPP1O60346 1717 aa33.14■■■□□ 2.9
PDLIM7-206ENST00000463411 C19orf44Q9H6X5 657 aa33.13■■■□□ 2.89
PDLIM7-206ENST00000463411 CADPS2Q86UW7 1296 aa33.12■■■□□ 2.89
PDLIM7-206ENST00000463411 ATF3P18847 181 aa33.11■■■□□ 2.89
PDLIM7-206ENST00000463411 METP08581 1390 aa33.1■■■□□ 2.89
PDLIM7-206ENST00000463411 PPLO60437 1756 aa33.09■■■□□ 2.89
PDLIM7-206ENST00000463411 VGFO15240 615 aaPredicted RBP33.09■■■□□ 2.89
PDLIM7-206ENST00000463411 RPGRIP1LQ68CZ1 1315 aa33.08■■■□□ 2.89
PDLIM7-206ENST00000463411 DCCP43146 1447 aa33.07■■■□□ 2.88
PDLIM7-206ENST00000463411 ACIN1Q9UKV3 1341 aaKnown RBP33.06■■■□□ 2.88
PDLIM7-206ENST00000463411 CCDC144AA2RUR9 1427 aa33.06■■■□□ 2.88
PDLIM7-206ENST00000463411 FOXD1Q16676 465 aa33.05■■■□□ 2.88
PDLIM7-206ENST00000463411 SETD1AO15047 1707 aaKnown RBP33.03■■■□□ 2.88
PDLIM7-206ENST00000463411 MPHOSPH9Q99550 1183 aa33.02■■■□□ 2.88
PDLIM7-206ENST00000463411 COL16A1Q07092 1604 aaPredicted RBP33.01■■■□□ 2.87
PDLIM7-206ENST00000463411 SETD5Q9C0A6 1442 aa33■■■□□ 2.87
PDLIM7-206ENST00000463411 AHDC1Q5TGY3 1603 aaPredicted RBP32.99■■■□□ 2.87
PDLIM7-206ENST00000463411 JCADQ9P266 1359 aa32.97■■■□□ 2.87
PDLIM7-206ENST00000463411 NALCNQ8IZF0 1738 aa32.97■■■□□ 2.87
PDLIM7-206ENST00000463411 ADGRL3Q9HAR2 1447 aa32.97■■■□□ 2.87
PDLIM7-206ENST00000463411 PTCH1Q13635 1447 aa32.95■■■□□ 2.87
PDLIM7-206ENST00000463411 IFT172Q9UG01 1749 aa32.93■■■□□ 2.86
PDLIM7-206ENST00000463411 MST1RQ04912 1400 aa32.91■■■□□ 2.86
PDLIM7-206ENST00000463411 SPATA31E1Q6ZUB1 1445 aa32.91■■■□□ 2.86
PDLIM7-206ENST00000463411 ASXL1Q8IXJ9 1541 aa32.9■■■□□ 2.86
PDLIM7-206ENST00000463411 PRAG1Q86YV5 1406 aa32.89■■■□□ 2.86
PDLIM7-206ENST00000463411 BRINP3Q76B58 766 aa32.89■■■□□ 2.86
PDLIM7-206ENST00000463411 ANKRD30BQ9BXX2 1392 aa32.88■■■□□ 2.85
PDLIM7-206ENST00000463411 RGL3Q3MIN7 710 aa32.87■■■□□ 2.85
PDLIM7-206ENST00000463411 SHPRHQ149N8 1683 aa32.87■■■□□ 2.85
PDLIM7-206ENST00000463411 RAB3GAP2Q9H2M9 1393 aa32.85■■■□□ 2.85
PDLIM7-206ENST00000463411 NHSL1Q5SYE7 1610 aa32.84■■■□□ 2.85
PDLIM7-206ENST00000463411 ROBO2Q9HCK4 1378 aa32.84■■■□□ 2.85
PDLIM7-206ENST00000463411 SPATA31A6Q5VVP1 1343 aa32.82■■■□□ 2.84
PDLIM7-206ENST00000463411 RGS17Q9UGC6 210 aaPredicted RBP32.82■■■□□ 2.84
PDLIM7-206ENST00000463411 ADGRF5Q8IZF2 1346 aa32.81■■■□□ 2.84
PDLIM7-206ENST00000463411 PIK3C2GO75747 1445 aa32.76■■■□□ 2.83
PDLIM7-206ENST00000463411 KNDC1Q76NI1 1749 aa32.74■■■□□ 2.83
PDLIM7-206ENST00000463411 C1orf167Q5SNV9 1468 aa32.74■■■□□ 2.83
PDLIM7-206ENST00000463411 LRP6O75581 1613 aa32.73■■■□□ 2.83
PDLIM7-206ENST00000463411 MEX3CQ5U5Q3 659 aaKnown RBP32.73■■■□□ 2.83
PDLIM7-206ENST00000463411 CDC42BPGQ6DT37 1551 aa32.71■■■□□ 2.83
PDLIM7-206ENST00000463411 LAMC1P11047 1609 aa32.7■■■□□ 2.83
PDLIM7-206ENST00000463411 LRPPRCP42704 1394 aaKnown RBP32.7■■■□□ 2.82
PDLIM7-206ENST00000463411 TECPR2O15040 1411 aa32.69■■■□□ 2.82
PDLIM7-206ENST00000463411 MYOM2P54296 1465 aa32.69■■■□□ 2.82
PDLIM7-206ENST00000463411 POTEAQ6S8J7 498 aa32.67■■■□□ 2.82
PDLIM7-206ENST00000463411 LRRC59Q96AG4 307 aaKnown RBP32.67■■■□□ 2.82
PDLIM7-206ENST00000463411 STK26Q9P289 416 aa32.67■■■□□ 2.82
PDLIM7-206ENST00000463411 ABCC11Q96J66 1382 aa32.64■■■□□ 2.82
PDLIM7-206ENST00000463411 NRXN1Q9ULB1 1477 aa32.64■■■□□ 2.82
PDLIM7-206ENST00000463411 YTHDC2Q9H6S0 1430 aaKnown RBP32.62■■■□□ 2.81
PDLIM7-206ENST00000463411 TMEM132EQ6IEE7 984 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms