RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 RIMS2Q9UQ26 1411 aa12.95□□□□□ -0.34
TMEM254-208ENST00000463209 SLC26A8Q96RN1 970 aa12.93□□□□□ -0.34
TMEM254-208ENST00000463209 CPS1P31327 1500 aa12.93□□□□□ -0.34
TMEM254-208ENST00000463209 BCANQ96GW7 911 aa12.92□□□□□ -0.34
TMEM254-208ENST00000463209 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
TMEM254-208ENST00000463209 PPP1R15AO75807 674 aaPredicted RBP12.91□□□□□ -0.34
TMEM254-208ENST00000463209 KIF1BO60333 1816 aa12.9□□□□□ -0.34
TMEM254-208ENST00000463209 XIRP1Q702N8 1843 aaKnown RBP12.9□□□□□ -0.34
TMEM254-208ENST00000463209 SETD5Q9C0A6 1442 aa12.9□□□□□ -0.34
TMEM254-208ENST00000463209 LRRC7Q96NW7 1537 aa12.9□□□□□ -0.34
TMEM254-208ENST00000463209 RAB3GAP2Q9H2M9 1393 aa12.9□□□□□ -0.34
TMEM254-208ENST00000463209 IQSEC2Q5JU85 1478 aa12.9□□□□□ -0.34
TMEM254-208ENST00000463209 UBAP1LF5GYI3 381 aa12.89□□□□□ -0.35
TMEM254-208ENST00000463209 ZNF326Q5BKZ1 582 aaKnown RBP12.88□□□□□ -0.35
TMEM254-208ENST00000463209 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
TMEM254-208ENST00000463209 PLEKHG1Q9ULL1 1385 aa12.88□□□□□ -0.35
TMEM254-208ENST00000463209 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
TMEM254-208ENST00000463209 NRXN3Q9Y4C0 1643 aa12.88□□□□□ -0.35
TMEM254-208ENST00000463209 NEXMIFQ5QGS0 1516 aa12.88□□□□□ -0.35
TMEM254-208ENST00000463209 MPHOSPH9Q99550 1183 aa12.86□□□□□ -0.35
TMEM254-208ENST00000463209 ADAMTS13Q76LX8 1427 aa12.86□□□□□ -0.35
TMEM254-208ENST00000463209 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
TMEM254-208ENST00000463209 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
TMEM254-208ENST00000463209 CHD2O14647 1828 aaKnown RBP12.84□□□□□ -0.35
TMEM254-208ENST00000463209 PIP4K2BP78356 416 aa12.84□□□□□ -0.35
TMEM254-208ENST00000463209 PPLO60437 1756 aa12.83□□□□□ -0.36
TMEM254-208ENST00000463209 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.82□□□□□ -0.36
TMEM254-208ENST00000463209 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
TMEM254-208ENST00000463209 DIP2AQ14689 1571 aa12.81□□□□□ -0.36
TMEM254-208ENST00000463209 SETBP1Q9Y6X0 1596 aa12.81□□□□□ -0.36
TMEM254-208ENST00000463209 CCDC144AA2RUR9 1427 aa12.81□□□□□ -0.36
TMEM254-208ENST00000463209 KCNA6P17658 529 aa12.81□□□□□ -0.36
TMEM254-208ENST00000463209 PTPRUQ92729 1446 aa12.8□□□□□ -0.36
TMEM254-208ENST00000463209 HDGFP51858 240 aaKnown RBP12.8□□□□□ -0.36
TMEM254-208ENST00000463209 IFT172Q9UG01 1749 aa12.79□□□□□ -0.36
TMEM254-208ENST00000463209 NKTRP30414 1462 aaKnown RBP12.79□□□□□ -0.36
TMEM254-208ENST00000463209 PROSER2Q86WR7 435 aaPredicted RBP12.79□□□□□ -0.36
TMEM254-208ENST00000463209 SETD1AO15047 1707 aaKnown RBP12.79□□□□□ -0.36
TMEM254-208ENST00000463209 RGL3Q3MIN7 710 aa12.78□□□□□ -0.36
TMEM254-208ENST00000463209 XRN1Q8IZH2 1706 aaKnown RBP12.78□□□□□ -0.36
TMEM254-208ENST00000463209 METP08581 1390 aa12.78□□□□□ -0.36
TMEM254-208ENST00000463209 TOM1O60784 492 aa12.77□□□□□ -0.37
TMEM254-208ENST00000463209 TBX22Q9Y458 520 aa12.77□□□□□ -0.37
TMEM254-208ENST00000463209 SPATA31E1Q6ZUB1 1445 aa12.77□□□□□ -0.37
TMEM254-208ENST00000463209 HSPA1LP34931 641 aa12.75□□□□□ -0.37
TMEM254-208ENST00000463209 ADGRF5Q8IZF2 1346 aa12.74□□□□□ -0.37
TMEM254-208ENST00000463209 AMOTL2Q9Y2J4 779 aa12.74□□□□□ -0.37
TMEM254-208ENST00000463209 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
TMEM254-208ENST00000463209 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.73□□□□□ -0.37
TMEM254-208ENST00000463209 ROBO1Q9Y6N7 1651 aa12.73□□□□□ -0.37
TMEM254-208ENST00000463209 NALCNQ8IZF0 1738 aa12.72□□□□□ -0.37
TMEM254-208ENST00000463209 MSH6P52701 1360 aa12.71□□□□□ -0.37
TMEM254-208ENST00000463209 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
TMEM254-208ENST00000463209 ANKRD30BQ9BXX2 1392 aa12.71□□□□□ -0.37
TMEM254-208ENST00000463209 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.38
TMEM254-208ENST00000463209 RPGRIP1LQ68CZ1 1315 aa12.7□□□□□ -0.38
TMEM254-208ENST00000463209 VGFO15240 615 aaPredicted RBP12.7□□□□□ -0.38
TMEM254-208ENST00000463209 PIK3C2GO75747 1445 aa12.68□□□□□ -0.38
TMEM254-208ENST00000463209 ROBO2Q9HCK4 1378 aa12.68□□□□□ -0.38
TMEM254-208ENST00000463209 ACIN1Q9UKV3 1341 aaKnown RBP12.66□□□□□ -0.38
TMEM254-208ENST00000463209 TMEM132EQ6IEE7 984 aa12.66□□□□□ -0.38
TMEM254-208ENST00000463209 STK26Q9P289 416 aa12.66□□□□□ -0.38
TMEM254-208ENST00000463209 MYOM2P54296 1465 aa12.65□□□□□ -0.38
TMEM254-208ENST00000463209 HRCP23327 699 aa12.65□□□□□ -0.38
TMEM254-208ENST00000463209 KDM2AQ9Y2K7 1162 aa12.65□□□□□ -0.38
TMEM254-208ENST00000463209 PHLPP1O60346 1717 aa12.65□□□□□ -0.38
TMEM254-208ENST00000463209 NRXN1Q9ULB1 1477 aa12.65□□□□□ -0.38
TMEM254-208ENST00000463209 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
TMEM254-208ENST00000463209 PTCH1Q13635 1447 aa12.64□□□□□ -0.39
TMEM254-208ENST00000463209 SLAIN2Q9P270 581 aa12.64□□□□□ -0.39
TMEM254-208ENST00000463209 DISP3Q9P2K9 1392 aa12.64□□□□□ -0.39
TMEM254-208ENST00000463209 FAM135BQ49AJ0 1406 aa12.63□□□□□ -0.39
TMEM254-208ENST00000463209 ADGRL3Q9HAR2 1447 aa12.63□□□□□ -0.39
TMEM254-208ENST00000463209 KNDC1Q76NI1 1749 aa12.63□□□□□ -0.39
TMEM254-208ENST00000463209 ATF3P18847 181 aa12.63□□□□□ -0.39
TMEM254-208ENST00000463209 CFAP70Q5T0N1 1121 aa12.63□□□□□ -0.39
TMEM254-208ENST00000463209 NCOA3Q9Y6Q9 1424 aa12.62□□□□□ -0.39
TMEM254-208ENST00000463209 LAMC1P11047 1609 aa12.62□□□□□ -0.39
TMEM254-208ENST00000463209 DHX57Q6P158 1386 aaKnown RBP12.62□□□□□ -0.39
TMEM254-208ENST00000463209 PLEKHH1Q9ULM0 1364 aa12.62□□□□□ -0.39
TMEM254-208ENST00000463209 DCAF11Q8TEB1 546 aa12.62□□□□□ -0.39
TMEM254-208ENST00000463209 C19orf44Q9H6X5 657 aa12.62□□□□□ -0.39
TMEM254-208ENST00000463209 MST1RQ04912 1400 aa12.62□□□□□ -0.39
TMEM254-208ENST00000463209 WAPLQ7Z5K2 1190 aa12.61□□□□□ -0.39
TMEM254-208ENST00000463209 COL16A1Q07092 1604 aaPredicted RBP12.61□□□□□ -0.39
TMEM254-208ENST00000463209 CADPS2Q86UW7 1296 aa12.6□□□□□ -0.39
TMEM254-208ENST00000463209 YTHDC2Q9H6S0 1430 aaKnown RBP12.6□□□□□ -0.39
TMEM254-208ENST00000463209 LRPPRCP42704 1394 aaKnown RBP12.59□□□□□ -0.39
TMEM254-208ENST00000463209 DCCP43146 1447 aa12.59□□□□□ -0.39
TMEM254-208ENST00000463209 PRAG1Q86YV5 1406 aa12.59□□□□□ -0.39
TMEM254-208ENST00000463209 ADGRB1O14514 1584 aa12.59□□□□□ -0.39
TMEM254-208ENST00000463209 TRIM26Q12899 539 aaPredicted RBP12.58□□□□□ -0.4
TMEM254-208ENST00000463209 BRINP3Q76B58 766 aa12.58□□□□□ -0.4
TMEM254-208ENST00000463209 DDX17Q92841 729 aaKnown RBP12.58□□□□□ -0.4
TMEM254-208ENST00000463209 SIN3AQ96ST3 1273 aa12.58□□□□□ -0.4
TMEM254-208ENST00000463209 C14orf93Q9H972 538 aaKnown RBP12.58□□□□□ -0.4
TMEM254-208ENST00000463209 CDC42BPGQ6DT37 1551 aa12.57□□□□□ -0.4
TMEM254-208ENST00000463209 TECPR2O15040 1411 aa12.57□□□□□ -0.4
TMEM254-208ENST00000463209 AHDC1Q5TGY3 1603 aaPredicted RBP12.57□□□□□ -0.4
TMEM254-208ENST00000463209 NHSL1Q5SYE7 1610 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms