RNA–Protein interactions for RNA: ENST00000462998.1

PTPN23-203, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 3

Gene PTPN23, Length 260 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-203ENST00000462998 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
PTPN23-203ENST00000462998 TRPM2O94759 1503 aa16.5■□□□□ 0.23
PTPN23-203ENST00000462998 HDGFP51858 240 aaKnown RBP16.49■□□□□ 0.23
PTPN23-203ENST00000462998 SLC26A8Q96RN1 970 aa16.49■□□□□ 0.23
PTPN23-203ENST00000462998 SLC4A1APQ9BWU0 796 aaKnown RBP16.49■□□□□ 0.23
PTPN23-203ENST00000462998 PLEKHG1Q9ULL1 1385 aa16.48■□□□□ 0.23
PTPN23-203ENST00000462998 CLTCL1P53675 1640 aa16.48■□□□□ 0.23
PTPN23-203ENST00000462998 LRRC7Q96NW7 1537 aa16.47■□□□□ 0.23
PTPN23-203ENST00000462998 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.47■□□□□ 0.23
PTPN23-203ENST00000462998 NUTM2DQ5VT03 806 aaPredicted RBP16.46■□□□□ 0.23
PTPN23-203ENST00000462998 ZNF326Q5BKZ1 582 aaKnown RBP16.45■□□□□ 0.22
PTPN23-203ENST00000462998 SETD5Q9C0A6 1442 aa16.44■□□□□ 0.22
PTPN23-203ENST00000462998 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
PTPN23-203ENST00000462998 KIF1BO60333 1816 aa16.42■□□□□ 0.22
PTPN23-203ENST00000462998 TOM1O60784 492 aa16.42■□□□□ 0.22
PTPN23-203ENST00000462998 KCNA6P17658 529 aa16.41■□□□□ 0.22
PTPN23-203ENST00000462998 PIP4K2BP78356 416 aa16.41■□□□□ 0.22
PTPN23-203ENST00000462998 FOXD1Q16676 465 aa16.41■□□□□ 0.22
PTPN23-203ENST00000462998 NWD1Q149M9 1564 aa16.41■□□□□ 0.22
PTPN23-203ENST00000462998 DIP2AQ14689 1571 aa16.4■□□□□ 0.22
PTPN23-203ENST00000462998 MPHOSPH9Q99550 1183 aa16.39■□□□□ 0.21
PTPN23-203ENST00000462998 XIRP1Q702N8 1843 aaKnown RBP16.39■□□□□ 0.21
PTPN23-203ENST00000462998 NKTRP30414 1462 aaKnown RBP16.39■□□□□ 0.21
PTPN23-203ENST00000462998 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
PTPN23-203ENST00000462998 ADAMTS13Q76LX8 1427 aa16.38■□□□□ 0.21
PTPN23-203ENST00000462998 TBX22Q9Y458 520 aa16.38■□□□□ 0.21
PTPN23-203ENST00000462998 NEXMIFQ5QGS0 1516 aa16.38■□□□□ 0.21
PTPN23-203ENST00000462998 TMEM94Q12767 1356 aa16.38■□□□□ 0.21
PTPN23-203ENST00000462998 PROSER2Q86WR7 435 aaPredicted RBP16.37■□□□□ 0.21
PTPN23-203ENST00000462998 CHD2O14647 1828 aaKnown RBP16.37■□□□□ 0.21
PTPN23-203ENST00000462998 ACIN1Q9UKV3 1341 aaKnown RBP16.37■□□□□ 0.21
PTPN23-203ENST00000462998 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
PTPN23-203ENST00000462998 SETBP1Q9Y6X0 1596 aa16.35■□□□□ 0.21
PTPN23-203ENST00000462998 RBM33Q96EV2 1170 aaKnown RBP16.35■□□□□ 0.21
PTPN23-203ENST00000462998 CCDC144AA2RUR9 1427 aa16.35■□□□□ 0.21
PTPN23-203ENST00000462998 NRXN3Q9Y4C0 1643 aa16.34■□□□□ 0.21
PTPN23-203ENST00000462998 PIK3R4Q99570 1358 aa16.33■□□□□ 0.2
PTPN23-203ENST00000462998 HSPA1LP34931 641 aa16.3■□□□□ 0.2
PTPN23-203ENST00000462998 PTPRUQ92729 1446 aa16.29■□□□□ 0.2
PTPN23-203ENST00000462998 MSH6P52701 1360 aa16.29■□□□□ 0.2
PTPN23-203ENST00000462998 PPLO60437 1756 aa16.29■□□□□ 0.2
PTPN23-203ENST00000462998 RPGRIP1LQ68CZ1 1315 aa16.29■□□□□ 0.2
PTPN23-203ENST00000462998 VGFO15240 615 aaPredicted RBP16.29■□□□□ 0.2
PTPN23-203ENST00000462998 C14orf37Q86TY3 774 aa16.28■□□□□ 0.2
PTPN23-203ENST00000462998 AMOTL2Q9Y2J4 779 aa16.28■□□□□ 0.2
PTPN23-203ENST00000462998 METP08581 1390 aa16.27■□□□□ 0.2
PTPN23-203ENST00000462998 RGL3Q3MIN7 710 aa16.27■□□□□ 0.2
PTPN23-203ENST00000462998 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.19
PTPN23-203ENST00000462998 SPATA31E1Q6ZUB1 1445 aa16.27■□□□□ 0.19
PTPN23-203ENST00000462998 NCOA3Q9Y6Q9 1424 aa16.24■□□□□ 0.19
PTPN23-203ENST00000462998 SETD1AO15047 1707 aaKnown RBP16.23■□□□□ 0.19
PTPN23-203ENST00000462998 IFT172Q9UG01 1749 aa16.23■□□□□ 0.19
PTPN23-203ENST00000462998 HRCP23327 699 aa16.23■□□□□ 0.19
PTPN23-203ENST00000462998 ROBO1Q9Y6N7 1651 aa16.22■□□□□ 0.19
PTPN23-203ENST00000462998 ANKRD30BQ9BXX2 1392 aa16.22■□□□□ 0.19
PTPN23-203ENST00000462998 DISP3Q9P2K9 1392 aa16.22■□□□□ 0.19
PTPN23-203ENST00000462998 ADGRF5Q8IZF2 1346 aa16.21■□□□□ 0.19
PTPN23-203ENST00000462998 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.19
PTPN23-203ENST00000462998 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.19
PTPN23-203ENST00000462998 ATF3P18847 181 aa16.19■□□□□ 0.18
PTPN23-203ENST00000462998 C19orf44Q9H6X5 657 aa16.19■□□□□ 0.18
PTPN23-203ENST00000462998 SLAIN2Q9P270 581 aa16.19■□□□□ 0.18
PTPN23-203ENST00000462998 CADPS2Q86UW7 1296 aa16.18■□□□□ 0.18
PTPN23-203ENST00000462998 PTCH1Q13635 1447 aa16.17■□□□□ 0.18
PTPN23-203ENST00000462998 PIK3C2GO75747 1445 aa16.16■□□□□ 0.18
PTPN23-203ENST00000462998 DCCP43146 1447 aa16.15■□□□□ 0.18
PTPN23-203ENST00000462998 MED1Q15648 1581 aaPredicted RBP16.15■□□□□ 0.18
PTPN23-203ENST00000462998 NALCNQ8IZF0 1738 aa16.15■□□□□ 0.18
PTPN23-203ENST00000462998 ADGRL3Q9HAR2 1447 aa16.15■□□□□ 0.18
PTPN23-203ENST00000462998 ROBO2Q9HCK4 1378 aa16.14■□□□□ 0.17
PTPN23-203ENST00000462998 MYOM2P54296 1465 aa16.14■□□□□ 0.17
PTPN23-203ENST00000462998 PRAG1Q86YV5 1406 aa16.13■□□□□ 0.17
PTPN23-203ENST00000462998 PHLPP1O60346 1717 aa16.13■□□□□ 0.17
PTPN23-203ENST00000462998 ASXL1Q8IXJ9 1541 aa16.13■□□□□ 0.17
PTPN23-203ENST00000462998 STK26Q9P289 416 aa16.12■□□□□ 0.17
PTPN23-203ENST00000462998 NRXN1Q9ULB1 1477 aa16.11■□□□□ 0.17
PTPN23-203ENST00000462998 TMEM132EQ6IEE7 984 aa16.11■□□□□ 0.17
PTPN23-203ENST00000462998 LAMC1P11047 1609 aa16.1■□□□□ 0.17
PTPN23-203ENST00000462998 LRPPRCP42704 1394 aaKnown RBP16.1■□□□□ 0.17
PTPN23-203ENST00000462998 MST1RQ04912 1400 aa16.1■□□□□ 0.17
PTPN23-203ENST00000462998 KNDC1Q76NI1 1749 aa16.08■□□□□ 0.17
PTPN23-203ENST00000462998 BRINP3Q76B58 766 aa16.08■□□□□ 0.16
PTPN23-203ENST00000462998 C14orf93Q9H972 538 aaKnown RBP16.08■□□□□ 0.16
PTPN23-203ENST00000462998 KDM2AQ9Y2K7 1162 aa16.08■□□□□ 0.16
PTPN23-203ENST00000462998 CFAP70Q5T0N1 1121 aa16.07■□□□□ 0.16
PTPN23-203ENST00000462998 DCAF11Q8TEB1 546 aa16.07■□□□□ 0.16
PTPN23-203ENST00000462998 TECPR2O15040 1411 aa16.07■□□□□ 0.16
PTPN23-203ENST00000462998 YTHDC2Q9H6S0 1430 aaKnown RBP16.07■□□□□ 0.16
PTPN23-203ENST00000462998 COL16A1Q07092 1604 aaPredicted RBP16.07■□□□□ 0.16
PTPN23-203ENST00000462998 AHDC1Q5TGY3 1603 aaPredicted RBP16.07■□□□□ 0.16
PTPN23-203ENST00000462998 ABCC11Q96J66 1382 aa16.06■□□□□ 0.16
PTPN23-203ENST00000462998 WAPLQ7Z5K2 1190 aa16.05■□□□□ 0.16
PTPN23-203ENST00000462998 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
PTPN23-203ENST00000462998 DHX57Q6P158 1386 aaKnown RBP16.04■□□□□ 0.16
PTPN23-203ENST00000462998 ILDR2Q71H61 639 aa16.04■□□□□ 0.16
PTPN23-203ENST00000462998 CDC42BPGQ6DT37 1551 aa16.04■□□□□ 0.16
PTPN23-203ENST00000462998 C1orf167Q5SNV9 1468 aa16.03■□□□□ 0.16
PTPN23-203ENST00000462998 JCADQ9P266 1359 aa16.03■□□□□ 0.16
PTPN23-203ENST00000462998 PLEKHH1Q9ULM0 1364 aa16.03■□□□□ 0.16
PTPN23-203ENST00000462998 NHSL1Q5SYE7 1610 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms