RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	ZNF326	Q5BKZ1	582 aa	Known RBP	14.23	□□□□□ -0.13
PSMD4-208	ENST00000462970	NUTM2D	Q5VT03	806 aa	Predicted RBP	14.23	□□□□□ -0.13
PSMD4-208	ENST00000462970	ARHGAP23	Q9P227	1491 aa		14.23	□□□□□ -0.13
PSMD4-208	ENST00000462970	TRPM2	O94759	1503 aa		14.22	□□□□□ -0.13
PSMD4-208	ENST00000462970	RIMS2	Q9UQ26	1411 aa		14.22	□□□□□ -0.13
PSMD4-208	ENST00000462970	LTBP4	Q8N2S1	1624 aa		14.22	□□□□□ -0.13
PSMD4-208	ENST00000462970	ACIN1	Q9UKV3	1341 aa	Known RBP	14.2	□□□□□ -0.14
PSMD4-208	ENST00000462970	MED14	O60244	1454 aa		14.2	□□□□□ -0.14
PSMD4-208	ENST00000462970	HDGF	P51858	240 aa	Known RBP	14.19	□□□□□ -0.14
PSMD4-208	ENST00000462970	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	14.17	□□□□□ -0.14
PSMD4-208	ENST00000462970	SLC26A8	Q96RN1	970 aa		14.17	□□□□□ -0.14
PSMD4-208	ENST00000462970	ZFYVE9	O95405	1425 aa		14.16	□□□□□ -0.14
PSMD4-208	ENST00000462970	CCDC144A	A2RUR9	1427 aa		14.15	□□□□□ -0.14
PSMD4-208	ENST00000462970	UBAP1L	F5GYI3	381 aa		14.14	□□□□□ -0.15
PSMD4-208	ENST00000462970	TRIM26	Q12899	539 aa	Predicted RBP	14.14	□□□□□ -0.15
PSMD4-208	ENST00000462970	STRCP1	A6NGW2	1772 aa		14.14	□□□□□ -0.15
PSMD4-208	ENST00000462970	PLEKHG1	Q9ULL1	1385 aa		14.13	□□□□□ -0.15
PSMD4-208	ENST00000462970	RGL3	Q3MIN7	710 aa		14.13	□□□□□ -0.15
PSMD4-208	ENST00000462970	HRC	P23327	699 aa		14.12	□□□□□ -0.15
PSMD4-208	ENST00000462970	CPS1	P31327	1500 aa		14.1	□□□□□ -0.15
PSMD4-208	ENST00000462970	NEXMIF	Q5QGS0	1516 aa		14.1	□□□□□ -0.15
PSMD4-208	ENST00000462970	DISP3	Q9P2K9	1392 aa		14.1	□□□□□ -0.15
PSMD4-208	ENST00000462970	PPL	O60437	1756 aa		14.09	□□□□□ -0.15
PSMD4-208	ENST00000462970	IQSEC2	Q5JU85	1478 aa		14.08	□□□□□ -0.16
PSMD4-208	ENST00000462970	SCAF1	Q9H7N4	1312 aa	Known RBP	14.08	□□□□□ -0.16
PSMD4-208	ENST00000462970	PIP4K2B	P78356	416 aa		14.07	□□□□□ -0.16
PSMD4-208	ENST00000462970	ILDR2	Q71H61	639 aa		14.07	□□□□□ -0.16
PSMD4-208	ENST00000462970	CHD2	O14647	1828 aa	Known RBP	14.06	□□□□□ -0.16
PSMD4-208	ENST00000462970	VGF	O15240	615 aa	Predicted RBP	14.06	□□□□□ -0.16
PSMD4-208	ENST00000462970	RPGRIP1L	Q68CZ1	1315 aa		14.06	□□□□□ -0.16
PSMD4-208	ENST00000462970	DIP2A	Q14689	1571 aa		14.05	□□□□□ -0.16
PSMD4-208	ENST00000462970	KCNA6	P17658	529 aa		14.05	□□□□□ -0.16
PSMD4-208	ENST00000462970	PROSER2	Q86WR7	435 aa	Predicted RBP	14.05	□□□□□ -0.16
PSMD4-208	ENST00000462970	RBM33	Q96EV2	1170 aa	Known RBP	14.05	□□□□□ -0.16
PSMD4-208	ENST00000462970	TBX22	Q9Y458	520 aa		14.05	□□□□□ -0.16
PSMD4-208	ENST00000462970	ANKRD30B	Q9BXX2	1392 aa		14.05	□□□□□ -0.16
PSMD4-208	ENST00000462970	SPATA31E1	Q6ZUB1	1445 aa		14.05	□□□□□ -0.16
PSMD4-208	ENST00000462970	ADAMTS13	Q76LX8	1427 aa		14.05	□□□□□ -0.16
PSMD4-208	ENST00000462970	LRRC7	Q96NW7	1537 aa		14.05	□□□□□ -0.16
PSMD4-208	ENST00000462970	NRXN3	Q9Y4C0	1643 aa		14.04	□□□□□ -0.16
PSMD4-208	ENST00000462970	SETBP1	Q9Y6X0	1596 aa		14.04	□□□□□ -0.16
PSMD4-208	ENST00000462970	IFT172	Q9UG01	1749 aa		14.04	□□□□□ -0.16
PSMD4-208	ENST00000462970	XIRP1	Q702N8	1843 aa	Known RBP	14.03	□□□□□ -0.16
PSMD4-208	ENST00000462970	C14orf37	Q86TY3	774 aa		14.02	□□□□□ -0.17
PSMD4-208	ENST00000462970	NWD1	Q149M9	1564 aa		14.01	□□□□□ -0.17
PSMD4-208	ENST00000462970	ADGRF5	Q8IZF2	1346 aa		14.01	□□□□□ -0.17
PSMD4-208	ENST00000462970	TMEM94	Q12767	1356 aa		14	□□□□□ -0.17
PSMD4-208	ENST00000462970	HSPA1L	P34931	641 aa		14	□□□□□ -0.17
PSMD4-208	ENST00000462970	AMOTL2	Q9Y2J4	779 aa		14	□□□□□ -0.17
PSMD4-208	ENST00000462970	KDM2A	Q9Y2K7	1162 aa		14	□□□□□ -0.17
PSMD4-208	ENST00000462970	NKTR	P30414	1462 aa	Known RBP	13.99	□□□□□ -0.17
PSMD4-208	ENST00000462970	MET	P08581	1390 aa		13.99	□□□□□ -0.17
PSMD4-208	ENST00000462970	TOM1	O60784	492 aa		13.99	□□□□□ -0.17
PSMD4-208	ENST00000462970	ALK	Q9UM73	1620 aa		13.99	□□□□□ -0.17
PSMD4-208	ENST00000462970	PIK3R4	Q99570	1358 aa		13.98	□□□□□ -0.17
PSMD4-208	ENST00000462970	PCGF6	Q9BYE7	350 aa		13.98	□□□□□ -0.17
PSMD4-208	ENST00000462970	PTPRU	Q92729	1446 aa		13.98	□□□□□ -0.17
PSMD4-208	ENST00000462970	ADRA2B	P18089	450 aa		13.97	□□□□□ -0.17
PSMD4-208	ENST00000462970	DCAF11	Q8TEB1	546 aa		13.97	□□□□□ -0.17
PSMD4-208	ENST00000462970	SETD1A	O15047	1707 aa	Known RBP	13.97	□□□□□ -0.17
PSMD4-208	ENST00000462970	NEUROD1	Q13562	356 aa		13.96	□□□□□ -0.17
PSMD4-208	ENST00000462970	STK26	Q9P289	416 aa		13.96	□□□□□ -0.17
PSMD4-208	ENST00000462970	XRN1	Q8IZH2	1706 aa	Known RBP	13.95	□□□□□ -0.18
PSMD4-208	ENST00000462970	MSH6	P52701	1360 aa		13.95	□□□□□ -0.18
PSMD4-208	ENST00000462970	DHX57	Q6P158	1386 aa	Known RBP	13.95	□□□□□ -0.18
PSMD4-208	ENST00000462970	SIN3A	Q96ST3	1273 aa		13.94	□□□□□ -0.18
PSMD4-208	ENST00000462970	MYOM2	P54296	1465 aa		13.93	□□□□□ -0.18
PSMD4-208	ENST00000462970	TMEM132E	Q6IEE7	984 aa		13.93	□□□□□ -0.18
PSMD4-208	ENST00000462970	PIK3C2G	O75747	1445 aa		13.92	□□□□□ -0.18
PSMD4-208	ENST00000462970	LAMC1	P11047	1609 aa		13.91	□□□□□ -0.18
PSMD4-208	ENST00000462970	CFAP70	Q5T0N1	1121 aa		13.91	□□□□□ -0.18
PSMD4-208	ENST00000462970	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.9	□□□□□ -0.18
PSMD4-208	ENST00000462970	SOCS7	O14512	581 aa		13.9	□□□□□ -0.18
PSMD4-208	ENST00000462970	NRXN1	Q9ULB1	1477 aa		13.89	□□□□□ -0.19
PSMD4-208	ENST00000462970	ATF3	P18847	181 aa		13.89	□□□□□ -0.19
PSMD4-208	ENST00000462970	ASXL1	Q8IXJ9	1541 aa		13.89	□□□□□ -0.19
PSMD4-208	ENST00000462970	ROBO2	Q9HCK4	1378 aa		13.88	□□□□□ -0.19
PSMD4-208	ENST00000462970	NALCN	Q8IZF0	1738 aa		13.88	□□□□□ -0.19
PSMD4-208	ENST00000462970	C14orf93	Q9H972	538 aa	Known RBP	13.88	□□□□□ -0.19
PSMD4-208	ENST00000462970	C19orf44	Q9H6X5	657 aa		13.87	□□□□□ -0.19
PSMD4-208	ENST00000462970	LRPPRC	P42704	1394 aa	Known RBP	13.86	□□□□□ -0.19
PSMD4-208	ENST00000462970	SLAIN2	Q9P270	581 aa		13.86	□□□□□ -0.19
PSMD4-208	ENST00000462970	PTCH1	Q13635	1447 aa		13.86	□□□□□ -0.19
PSMD4-208	ENST00000462970	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.86	□□□□□ -0.19
PSMD4-208	ENST00000462970	NCOA3	Q9Y6Q9	1424 aa		13.86	□□□□□ -0.19
PSMD4-208	ENST00000462970	KNDC1	Q76NI1	1749 aa		13.86	□□□□□ -0.19
PSMD4-208	ENST00000462970	ROBO1	Q9Y6N7	1651 aa		13.85	□□□□□ -0.19
PSMD4-208	ENST00000462970	WAPL	Q7Z5K2	1190 aa		13.85	□□□□□ -0.19
PSMD4-208	ENST00000462970	CADPS2	Q86UW7	1296 aa		13.85	□□□□□ -0.19
PSMD4-208	ENST00000462970	L3MBTL2	Q969R5	705 aa		13.85	□□□□□ -0.19
PSMD4-208	ENST00000462970	ADGRL3	Q9HAR2	1447 aa		13.84	□□□□□ -0.19
PSMD4-208	ENST00000462970	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
PSMD4-208	ENST00000462970	STAC3	Q96MF2	364 aa		13.84	□□□□□ -0.19
PSMD4-208	ENST00000462970	TRAK1	Q9UPV9	953 aa		13.83	□□□□□ -0.2
PSMD4-208	ENST00000462970	TONSL	Q96HA7	1378 aa		13.83	□□□□□ -0.2
PSMD4-208	ENST00000462970	POGK	Q9P215	609 aa		13.82	□□□□□ -0.2
PSMD4-208	ENST00000462970	ABCC11	Q96J66	1382 aa		13.82	□□□□□ -0.2
PSMD4-208	ENST00000462970	PLEKHH1	Q9ULM0	1364 aa		13.82	□□□□□ -0.2
PSMD4-208	ENST00000462970	MED1	Q15648	1581 aa	Predicted RBP	13.81	□□□□□ -0.2
PSMD4-208	ENST00000462970	TECPR2	O15040	1411 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms