RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 HDGFP51858 240 aaKnown RBP27.62■■■□□ 2.01
CDKN1A-206ENST00000462537 BCANQ96GW7 911 aa27.62■■■□□ 2.01
CDKN1A-206ENST00000462537 CLTCL1P53675 1640 aa27.62■■■□□ 2.01
CDKN1A-206ENST00000462537 SENP3Q9H4L4 574 aaPredicted RBP27.6■■■□□ 2.01
CDKN1A-206ENST00000462537 STRCP1A6NGW2 1772 aa27.58■■■□□ 2.01
CDKN1A-206ENST00000462537 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.57■■■□□ 2
CDKN1A-206ENST00000462537 KIF1BO60333 1816 aa27.57■■■□□ 2
CDKN1A-206ENST00000462537 NUTM2DQ5VT03 806 aaPredicted RBP27.56■■■□□ 2
CDKN1A-206ENST00000462537 ZNF326Q5BKZ1 582 aaKnown RBP27.55■■■□□ 2
CDKN1A-206ENST00000462537 SLC26A8Q96RN1 970 aa27.55■■■□□ 2
CDKN1A-206ENST00000462537 ACIN1Q9UKV3 1341 aaKnown RBP27.55■■■□□ 2
CDKN1A-206ENST00000462537 RAB3GAP2Q9H2M9 1393 aa27.55■■■□□ 2
CDKN1A-206ENST00000462537 FOXD1Q16676 465 aa27.54■■■□□ 2
CDKN1A-206ENST00000462537 MPHOSPH9Q99550 1183 aa27.54■■■□□ 2
CDKN1A-206ENST00000462537 PLEKHG1Q9ULL1 1385 aa27.54■■■□□ 2
CDKN1A-206ENST00000462537 UBAP1LF5GYI3 381 aa27.49■■□□□ 1.99
CDKN1A-206ENST00000462537 LRRC7Q96NW7 1537 aa27.47■■□□□ 1.99
CDKN1A-206ENST00000462537 CCDC144AA2RUR9 1427 aa27.43■■□□□ 1.98
CDKN1A-206ENST00000462537 NEXMIFQ5QGS0 1516 aa27.43■■□□□ 1.98
CDKN1A-206ENST00000462537 DIP2AQ14689 1571 aa27.43■■□□□ 1.98
CDKN1A-206ENST00000462537 KCNA6P17658 529 aa27.42■■□□□ 1.98
CDKN1A-206ENST00000462537 NWD1Q149M9 1564 aa27.4■■□□□ 1.98
CDKN1A-206ENST00000462537 ADAMTS13Q76LX8 1427 aa27.4■■□□□ 1.98
CDKN1A-206ENST00000462537 TBX22Q9Y458 520 aa27.39■■□□□ 1.98
CDKN1A-206ENST00000462537 CHD2O14647 1828 aaKnown RBP27.39■■□□□ 1.97
CDKN1A-206ENST00000462537 TOM1O60784 492 aa27.38■■□□□ 1.97
CDKN1A-206ENST00000462537 XIRP1Q702N8 1843 aaKnown RBP27.38■■□□□ 1.97
CDKN1A-206ENST00000462537 NKTRP30414 1462 aaKnown RBP27.37■■□□□ 1.97
CDKN1A-206ENST00000462537 SCAF1Q9H7N4 1312 aaKnown RBP27.37■■□□□ 1.97
CDKN1A-206ENST00000462537 NRXN3Q9Y4C0 1643 aa27.36■■□□□ 1.97
CDKN1A-206ENST00000462537 SETBP1Q9Y6X0 1596 aa27.35■■□□□ 1.97
CDKN1A-206ENST00000462537 PROSER2Q86WR7 435 aaPredicted RBP27.35■■□□□ 1.97
CDKN1A-206ENST00000462537 PPLO60437 1756 aa27.33■■□□□ 1.97
CDKN1A-206ENST00000462537 HRCP23327 699 aa27.33■■□□□ 1.97
CDKN1A-206ENST00000462537 PIP4K2BP78356 416 aa27.33■■□□□ 1.97
CDKN1A-206ENST00000462537 TMEM94Q12767 1356 aa27.33■■□□□ 1.97
CDKN1A-206ENST00000462537 RPGRIP1LQ68CZ1 1315 aa27.32■■□□□ 1.96
CDKN1A-206ENST00000462537 VGFO15240 615 aaPredicted RBP27.31■■□□□ 1.96
CDKN1A-206ENST00000462537 RGL3Q3MIN7 710 aa27.3■■□□□ 1.96
CDKN1A-206ENST00000462537 RBM33Q96EV2 1170 aaKnown RBP27.3■■□□□ 1.96
CDKN1A-206ENST00000462537 PIK3R4Q99570 1358 aa27.3■■□□□ 1.96
CDKN1A-206ENST00000462537 SPATA31E1Q6ZUB1 1445 aa27.27■■□□□ 1.96
CDKN1A-206ENST00000462537 ALKQ9UM73 1620 aa27.27■■□□□ 1.96
CDKN1A-206ENST00000462537 AMOTL2Q9Y2J4 779 aa27.24■■□□□ 1.95
CDKN1A-206ENST00000462537 IFT172Q9UG01 1749 aa27.24■■□□□ 1.95
CDKN1A-206ENST00000462537 PTPRUQ92729 1446 aa27.24■■□□□ 1.95
CDKN1A-206ENST00000462537 METP08581 1390 aa27.22■■□□□ 1.95
CDKN1A-206ENST00000462537 XRN1Q8IZH2 1706 aaKnown RBP27.21■■□□□ 1.95
CDKN1A-206ENST00000462537 C14orf37Q86TY3 774 aa27.2■■□□□ 1.94
CDKN1A-206ENST00000462537 MSH6P52701 1360 aa27.2■■□□□ 1.94
CDKN1A-206ENST00000462537 ANKRD30BQ9BXX2 1392 aa27.2■■□□□ 1.94
CDKN1A-206ENST00000462537 SETD1AO15047 1707 aaKnown RBP27.19■■□□□ 1.94
CDKN1A-206ENST00000462537 ADGRF5Q8IZF2 1346 aa27.16■■□□□ 1.94
CDKN1A-206ENST00000462537 NCOA3Q9Y6Q9 1424 aa27.15■■□□□ 1.94
CDKN1A-206ENST00000462537 HSPA1LP34931 641 aa27.13■■□□□ 1.93
CDKN1A-206ENST00000462537 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.1■■□□□ 1.93
CDKN1A-206ENST00000462537 PIK3C2GO75747 1445 aa27.07■■□□□ 1.92
CDKN1A-206ENST00000462537 ROBO1Q9Y6N7 1651 aa27.07■■□□□ 1.92
CDKN1A-206ENST00000462537 MYOM2P54296 1465 aa27.06■■□□□ 1.92
CDKN1A-206ENST00000462537 C19orf44Q9H6X5 657 aa27.06■■□□□ 1.92
CDKN1A-206ENST00000462537 ATF3P18847 181 aa27.05■■□□□ 1.92
CDKN1A-206ENST00000462537 TRIM26Q12899 539 aaPredicted RBP27.05■■□□□ 1.92
CDKN1A-206ENST00000462537 SLAIN2Q9P270 581 aa27.04■■□□□ 1.92
CDKN1A-206ENST00000462537 FAM135BQ49AJ0 1406 aa27.04■■□□□ 1.92
CDKN1A-206ENST00000462537 PTCH1Q13635 1447 aa27.03■■□□□ 1.92
CDKN1A-206ENST00000462537 CADPS2Q86UW7 1296 aa27.02■■□□□ 1.92
CDKN1A-206ENST00000462537 NALCNQ8IZF0 1738 aa27.02■■□□□ 1.92
CDKN1A-206ENST00000462537 NRXN1Q9ULB1 1477 aa27.01■■□□□ 1.91
CDKN1A-206ENST00000462537 ROBO2Q9HCK4 1378 aa27.01■■□□□ 1.91
CDKN1A-206ENST00000462537 LAMC1P11047 1609 aa27.01■■□□□ 1.91
CDKN1A-206ENST00000462537 ADGRL3Q9HAR2 1447 aa26.99■■□□□ 1.91
CDKN1A-206ENST00000462537 DCAF11Q8TEB1 546 aa26.99■■□□□ 1.91
CDKN1A-206ENST00000462537 STK26Q9P289 416 aa26.99■■□□□ 1.91
CDKN1A-206ENST00000462537 KDM2AQ9Y2K7 1162 aa26.99■■□□□ 1.91
CDKN1A-206ENST00000462537 ASXL1Q8IXJ9 1541 aa26.99■■□□□ 1.91
CDKN1A-206ENST00000462537 DCCP43146 1447 aa26.99■■□□□ 1.91
CDKN1A-206ENST00000462537 TMEM132EQ6IEE7 984 aa26.98■■□□□ 1.91
CDKN1A-206ENST00000462537 PRAG1Q86YV5 1406 aa26.98■■□□□ 1.91
CDKN1A-206ENST00000462537 CFAP70Q5T0N1 1121 aa26.95■■□□□ 1.9
CDKN1A-206ENST00000462537 C14orf93Q9H972 538 aaKnown RBP26.95■■□□□ 1.9
CDKN1A-206ENST00000462537 KNDC1Q76NI1 1749 aa26.95■■□□□ 1.9
CDKN1A-206ENST00000462537 LRPPRCP42704 1394 aaKnown RBP26.95■■□□□ 1.9
CDKN1A-206ENST00000462537 YTHDC2Q9H6S0 1430 aaKnown RBP26.93■■□□□ 1.9
CDKN1A-206ENST00000462537 PHLPP1O60346 1717 aa26.92■■□□□ 1.9
CDKN1A-206ENST00000462537 DHX57Q6P158 1386 aaKnown RBP26.92■■□□□ 1.9
CDKN1A-206ENST00000462537 TECPR2O15040 1411 aa26.9■■□□□ 1.9
CDKN1A-206ENST00000462537 DISP3Q9P2K9 1392 aa26.9■■□□□ 1.9
CDKN1A-206ENST00000462537 STAC3Q96MF2 364 aa26.9■■□□□ 1.9
CDKN1A-206ENST00000462537 ABCC11Q96J66 1382 aa26.89■■□□□ 1.9
CDKN1A-206ENST00000462537 MST1RQ04912 1400 aa26.89■■□□□ 1.89
CDKN1A-206ENST00000462537 WAPLQ7Z5K2 1190 aa26.86■■□□□ 1.89
CDKN1A-206ENST00000462537 MED1Q15648 1581 aaPredicted RBP26.84■■□□□ 1.89
CDKN1A-206ENST00000462537 BRINP3Q76B58 766 aa26.84■■□□□ 1.89
CDKN1A-206ENST00000462537 PLEKHH1Q9ULM0 1364 aa26.83■■□□□ 1.88
CDKN1A-206ENST00000462537 ADGRB1O14514 1584 aa26.82■■□□□ 1.88
CDKN1A-206ENST00000462537 CDC42BPGQ6DT37 1551 aa26.81■■□□□ 1.88
CDKN1A-206ENST00000462537 AHDC1Q5TGY3 1603 aaPredicted RBP26.81■■□□□ 1.88
CDKN1A-206ENST00000462537 SIN3AQ96ST3 1273 aa26.81■■□□□ 1.88
CDKN1A-206ENST00000462537 COL16A1Q07092 1604 aaPredicted RBP26.8■■□□□ 1.88
CDKN1A-206ENST00000462537 NEUROD1Q13562 356 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms