RNA–Protein interactions for RNA: ENST00000461818.5

PCOLCE2-202, Transcript of procollagen C-endopeptidase enhancer 2, humanhuman

TSL 3

Gene PCOLCE2, Length 909 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE2-202ENST00000461818 RIMS2Q9UQ26 1411 aa36.89■■■■□ 3.5
PCOLCE2-202ENST00000461818 HDGFP51858 240 aaKnown RBP36.87■■■■□ 3.49
PCOLCE2-202ENST00000461818 KIF1BO60333 1816 aa36.86■■■■□ 3.49
PCOLCE2-202ENST00000461818 STRCP1A6NGW2 1772 aa36.82■■■■□ 3.48
PCOLCE2-202ENST00000461818 PPP1R15AO75807 674 aaPredicted RBP36.81■■■■□ 3.48
PCOLCE2-202ENST00000461818 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.81■■■■□ 3.48
PCOLCE2-202ENST00000461818 RAB3GAP2Q9H2M9 1393 aa36.79■■■■□ 3.48
PCOLCE2-202ENST00000461818 PLEKHG1Q9ULL1 1385 aa36.79■■■■□ 3.48
PCOLCE2-202ENST00000461818 MPHOSPH9Q99550 1183 aa36.76■■■■□ 3.48
PCOLCE2-202ENST00000461818 BCANQ96GW7 911 aa36.74■■■■□ 3.47
PCOLCE2-202ENST00000461818 ZNF326Q5BKZ1 582 aaKnown RBP36.7■■■■□ 3.47
PCOLCE2-202ENST00000461818 SLC26A8Q96RN1 970 aa36.7■■■■□ 3.47
PCOLCE2-202ENST00000461818 FOXD1Q16676 465 aa36.68■■■■□ 3.46
PCOLCE2-202ENST00000461818 DIP2AQ14689 1571 aa36.68■■■■□ 3.46
PCOLCE2-202ENST00000461818 LRRC7Q96NW7 1537 aa36.66■■■■□ 3.46
PCOLCE2-202ENST00000461818 NUTM2DQ5VT03 806 aaPredicted RBP36.66■■■■□ 3.46
PCOLCE2-202ENST00000461818 NEXMIFQ5QGS0 1516 aa36.65■■■■□ 3.46
PCOLCE2-202ENST00000461818 NWD1Q149M9 1564 aa36.65■■■■□ 3.46
PCOLCE2-202ENST00000461818 CCDC144AA2RUR9 1427 aa36.64■■■■□ 3.46
PCOLCE2-202ENST00000461818 SENP3Q9H4L4 574 aaPredicted RBP36.62■■■■□ 3.45
PCOLCE2-202ENST00000461818 CHD2O14647 1828 aaKnown RBP36.61■■■■□ 3.45
PCOLCE2-202ENST00000461818 ADAMTS13Q76LX8 1427 aa36.59■■■■□ 3.45
PCOLCE2-202ENST00000461818 UBAP1LF5GYI3 381 aa36.59■■■■□ 3.45
PCOLCE2-202ENST00000461818 KCNA6P17658 529 aa36.59■■■■□ 3.45
PCOLCE2-202ENST00000461818 HRCP23327 699 aa36.59■■■■□ 3.45
PCOLCE2-202ENST00000461818 SETBP1Q9Y6X0 1596 aa36.58■■■■□ 3.45
PCOLCE2-202ENST00000461818 NKTRP30414 1462 aaKnown RBP36.58■■■■□ 3.45
PCOLCE2-202ENST00000461818 XIRP1Q702N8 1843 aaKnown RBP36.57■■■■□ 3.45
PCOLCE2-202ENST00000461818 TBX22Q9Y458 520 aa36.57■■■■□ 3.44
PCOLCE2-202ENST00000461818 NRXN3Q9Y4C0 1643 aa36.56■■■■□ 3.44
PCOLCE2-202ENST00000461818 PPLO60437 1756 aa36.55■■■■□ 3.44
PCOLCE2-202ENST00000461818 PIK3R4Q99570 1358 aa36.52■■■■□ 3.44
PCOLCE2-202ENST00000461818 RPGRIP1LQ68CZ1 1315 aa36.51■■■■□ 3.43
PCOLCE2-202ENST00000461818 TOM1O60784 492 aa36.49■■■■□ 3.43
PCOLCE2-202ENST00000461818 SPATA31E1Q6ZUB1 1445 aa36.45■■■■□ 3.43
PCOLCE2-202ENST00000461818 VGFO15240 615 aaPredicted RBP36.45■■■■□ 3.43
PCOLCE2-202ENST00000461818 IFT172Q9UG01 1749 aa36.45■■■■□ 3.43
PCOLCE2-202ENST00000461818 TMEM94Q12767 1356 aa36.44■■■■□ 3.42
PCOLCE2-202ENST00000461818 PROSER2Q86WR7 435 aaPredicted RBP36.43■■■■□ 3.42
PCOLCE2-202ENST00000461818 ALKQ9UM73 1620 aa36.41■■■■□ 3.42
PCOLCE2-202ENST00000461818 XRN1Q8IZH2 1706 aaKnown RBP36.37■■■■□ 3.41
PCOLCE2-202ENST00000461818 SETD1AO15047 1707 aaKnown RBP36.37■■■■□ 3.41
PCOLCE2-202ENST00000461818 SCAF1Q9H7N4 1312 aaKnown RBP36.36■■■■□ 3.41
PCOLCE2-202ENST00000461818 RGL3Q3MIN7 710 aa36.36■■■■□ 3.41
PCOLCE2-202ENST00000461818 ANKRD30BQ9BXX2 1392 aa36.35■■■■□ 3.41
PCOLCE2-202ENST00000461818 PTPRUQ92729 1446 aa36.34■■■■□ 3.41
PCOLCE2-202ENST00000461818 PIP4K2BP78356 416 aa36.34■■■■□ 3.41
PCOLCE2-202ENST00000461818 METP08581 1390 aa36.31■■■■□ 3.4
PCOLCE2-202ENST00000461818 AMOTL2Q9Y2J4 779 aa36.31■■■■□ 3.4
PCOLCE2-202ENST00000461818 NCOA3Q9Y6Q9 1424 aa36.31■■■■□ 3.4
PCOLCE2-202ENST00000461818 RBM33Q96EV2 1170 aaKnown RBP36.3■■■■□ 3.4
PCOLCE2-202ENST00000461818 MSH6P52701 1360 aa36.29■■■■□ 3.4
PCOLCE2-202ENST00000461818 ADGRF5Q8IZF2 1346 aa36.23■■■■□ 3.39
PCOLCE2-202ENST00000461818 MYOM2P54296 1465 aa36.21■■■■□ 3.39
PCOLCE2-202ENST00000461818 C14orf37Q86TY3 774 aa36.2■■■■□ 3.39
PCOLCE2-202ENST00000461818 PIK3C2GO75747 1445 aa36.19■■■■□ 3.38
PCOLCE2-202ENST00000461818 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.19■■■■□ 3.38
PCOLCE2-202ENST00000461818 PTCH1Q13635 1447 aa36.15■■■■□ 3.38
PCOLCE2-202ENST00000461818 LAMC1P11047 1609 aa36.15■■■■□ 3.38
PCOLCE2-202ENST00000461818 NRXN1Q9ULB1 1477 aa36.14■■■■□ 3.38
PCOLCE2-202ENST00000461818 TRIM26Q12899 539 aaPredicted RBP36.14■■■■□ 3.38
PCOLCE2-202ENST00000461818 PRAG1Q86YV5 1406 aa36.14■■■■□ 3.38
PCOLCE2-202ENST00000461818 HSPA1LP34931 641 aa36.12■■■■□ 3.37
PCOLCE2-202ENST00000461818 ROBO1Q9Y6N7 1651 aa36.12■■■■□ 3.37
PCOLCE2-202ENST00000461818 FAM135BQ49AJ0 1406 aa36.11■■■■□ 3.37
PCOLCE2-202ENST00000461818 C19orf44Q9H6X5 657 aa36.11■■■■□ 3.37
PCOLCE2-202ENST00000461818 DCCP43146 1447 aa36.08■■■■□ 3.37
PCOLCE2-202ENST00000461818 NALCNQ8IZF0 1738 aa36.08■■■■□ 3.37
PCOLCE2-202ENST00000461818 CADPS2Q86UW7 1296 aa36.07■■■■□ 3.36
PCOLCE2-202ENST00000461818 ASXL1Q8IXJ9 1541 aa36.07■■■■□ 3.36
PCOLCE2-202ENST00000461818 KNDC1Q76NI1 1749 aa36.06■■■■□ 3.36
PCOLCE2-202ENST00000461818 ATF3P18847 181 aa36.05■■■■□ 3.36
PCOLCE2-202ENST00000461818 ADGRL3Q9HAR2 1447 aa36.05■■■■□ 3.36
PCOLCE2-202ENST00000461818 SLAIN2Q9P270 581 aa36.04■■■■□ 3.36
PCOLCE2-202ENST00000461818 ROBO2Q9HCK4 1378 aa36.03■■■■□ 3.36
PCOLCE2-202ENST00000461818 STAC3Q96MF2 364 aa36■■■■□ 3.35
PCOLCE2-202ENST00000461818 LRPPRCP42704 1394 aaKnown RBP36■■■■□ 3.35
PCOLCE2-202ENST00000461818 TECPR2O15040 1411 aa36■■■■□ 3.35
PCOLCE2-202ENST00000461818 DCAF11Q8TEB1 546 aa35.99■■■■□ 3.35
PCOLCE2-202ENST00000461818 C14orf93Q9H972 538 aaKnown RBP35.99■■■■□ 3.35
PCOLCE2-202ENST00000461818 DHX57Q6P158 1386 aaKnown RBP35.96■■■■□ 3.35
PCOLCE2-202ENST00000461818 YTHDC2Q9H6S0 1430 aaKnown RBP35.95■■■■□ 3.35
PCOLCE2-202ENST00000461818 TMEM132EQ6IEE7 984 aa35.95■■■■□ 3.35
PCOLCE2-202ENST00000461818 KDM2AQ9Y2K7 1162 aa35.95■■■■□ 3.35
PCOLCE2-202ENST00000461818 CFAP70Q5T0N1 1121 aa35.94■■■■□ 3.34
PCOLCE2-202ENST00000461818 ABCC11Q96J66 1382 aa35.93■■■■□ 3.34
PCOLCE2-202ENST00000461818 STK26Q9P289 416 aa35.93■■■■□ 3.34
PCOLCE2-202ENST00000461818 PHLPP1O60346 1717 aa35.91■■■■□ 3.34
PCOLCE2-202ENST00000461818 MST1RQ04912 1400 aa35.9■■■■□ 3.34
PCOLCE2-202ENST00000461818 ADGRB1O14514 1584 aa35.86■■■■□ 3.33
PCOLCE2-202ENST00000461818 CDC42BPGQ6DT37 1551 aa35.86■■■■□ 3.33
PCOLCE2-202ENST00000461818 AHDC1Q5TGY3 1603 aaPredicted RBP35.83■■■■□ 3.33
PCOLCE2-202ENST00000461818 DLC1Q96QB1 1528 aa35.81■■■■□ 3.32
PCOLCE2-202ENST00000461818 KIAA1210Q9ULL0 1709 aa35.8■■■■□ 3.32
PCOLCE2-202ENST00000461818 SIRT1Q96EB6 747 aa35.8■■■■□ 3.32
PCOLCE2-202ENST00000461818 MED1Q15648 1581 aaPredicted RBP35.8■■■■□ 3.32
PCOLCE2-202ENST00000461818 COL16A1Q07092 1604 aaPredicted RBP35.79■■■■□ 3.32
PCOLCE2-202ENST00000461818 BRINP3Q76B58 766 aa35.79■■■■□ 3.32
PCOLCE2-202ENST00000461818 WAPLQ7Z5K2 1190 aa35.79■■■■□ 3.32
PCOLCE2-202ENST00000461818 DISP3Q9P2K9 1392 aa35.78■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms