RNA–Protein interactions for RNA: ENST00000461533.1

ITGA9-204, Transcript of integrin subunit alpha 9, humanhuman

TSL 3

Gene ITGA9, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-204ENST00000461533 DISP3Q9P2K9 1392 aa12.04□□□□□ -0.48
ITGA9-204ENST00000461533 NAIPQ13075 1403 aa12.03□□□□□ -0.48
ITGA9-204ENST00000461533 XIRP1Q702N8 1843 aaKnown RBP12.03□□□□□ -0.48
ITGA9-204ENST00000461533 PIP4K2BP78356 416 aa12.03□□□□□ -0.48
ITGA9-204ENST00000461533 SLC26A8Q96RN1 970 aa12.03□□□□□ -0.48
ITGA9-204ENST00000461533 NWD1Q149M9 1564 aa12.03□□□□□ -0.48
ITGA9-204ENST00000461533 HFM1A2PYH4 1435 aa12.03□□□□□ -0.48
ITGA9-204ENST00000461533 NKTRP30414 1462 aaKnown RBP12.02□□□□□ -0.48
ITGA9-204ENST00000461533 HSPA1LP34931 641 aa12.02□□□□□ -0.49
ITGA9-204ENST00000461533 SCAF1Q9H7N4 1312 aaKnown RBP12.02□□□□□ -0.49
ITGA9-204ENST00000461533 SPHKAPQ2M3C7 1700 aa12.01□□□□□ -0.49
ITGA9-204ENST00000461533 PPP1R15AO75807 674 aaPredicted RBP12.01□□□□□ -0.49
ITGA9-204ENST00000461533 TBX22Q9Y458 520 aa12□□□□□ -0.49
ITGA9-204ENST00000461533 TMEM94Q12767 1356 aa12□□□□□ -0.49
ITGA9-204ENST00000461533 DIP2AQ14689 1571 aa12□□□□□ -0.49
ITGA9-204ENST00000461533 CHGAP10645 457 aaKnown RBP11.99□□□□□ -0.49
ITGA9-204ENST00000461533 PIK3R4Q99570 1358 aa11.99□□□□□ -0.49
ITGA9-204ENST00000461533 CHD2O14647 1828 aaKnown RBP11.99□□□□□ -0.49
ITGA9-204ENST00000461533 TRPM2O94759 1503 aa11.98□□□□□ -0.49
ITGA9-204ENST00000461533 ADAMTS13Q76LX8 1427 aa11.98□□□□□ -0.49
ITGA9-204ENST00000461533 PROSER2Q86WR7 435 aaPredicted RBP11.98□□□□□ -0.49
ITGA9-204ENST00000461533 BCANQ96GW7 911 aa11.98□□□□□ -0.49
ITGA9-204ENST00000461533 FAM135BQ49AJ0 1406 aa11.97□□□□□ -0.49
ITGA9-204ENST00000461533 NCOA3Q9Y6Q9 1424 aa11.96□□□□□ -0.49
ITGA9-204ENST00000461533 CLTCL1P53675 1640 aa11.94□□□□□ -0.5
ITGA9-204ENST00000461533 SETBP1Q9Y6X0 1596 aa11.94□□□□□ -0.5
ITGA9-204ENST00000461533 MSH6P52701 1360 aa11.93□□□□□ -0.5
ITGA9-204ENST00000461533 MED1Q15648 1581 aaPredicted RBP11.93□□□□□ -0.5
ITGA9-204ENST00000461533 ILDR2Q71H61 639 aa11.93□□□□□ -0.5
ITGA9-204ENST00000461533 NUTM2DQ5VT03 806 aaPredicted RBP11.92□□□□□ -0.5
ITGA9-204ENST00000461533 KIF1BO60333 1816 aa11.92□□□□□ -0.5
ITGA9-204ENST00000461533 NRXN3Q9Y4C0 1643 aa11.92□□□□□ -0.5
ITGA9-204ENST00000461533 NEXMIFQ5QGS0 1516 aa11.91□□□□□ -0.5
ITGA9-204ENST00000461533 ACIN1Q9UKV3 1341 aaKnown RBP11.91□□□□□ -0.5
ITGA9-204ENST00000461533 TRIM52Q96A61 297 aa11.91□□□□□ -0.5
ITGA9-204ENST00000461533 SLC4A1APQ9BWU0 796 aaKnown RBP11.91□□□□□ -0.5
ITGA9-204ENST00000461533 ZNF326Q5BKZ1 582 aaKnown RBP11.9□□□□□ -0.5
ITGA9-204ENST00000461533 RBM33Q96EV2 1170 aaKnown RBP11.9□□□□□ -0.5
ITGA9-204ENST00000461533 SENP3Q9H4L4 574 aaPredicted RBP11.9□□□□□ -0.5
ITGA9-204ENST00000461533 SLAIN2Q9P270 581 aa11.9□□□□□ -0.5
ITGA9-204ENST00000461533 ROBO1Q9Y6N7 1651 aa11.9□□□□□ -0.5
ITGA9-204ENST00000461533 XRN1Q8IZH2 1706 aaKnown RBP11.89□□□□□ -0.51
ITGA9-204ENST00000461533 PTPRUQ92729 1446 aa11.89□□□□□ -0.51
ITGA9-204ENST00000461533 SOCS7O14512 581 aa11.89□□□□□ -0.51
ITGA9-204ENST00000461533 AMOTL2Q9Y2J4 779 aa11.89□□□□□ -0.51
ITGA9-204ENST00000461533 RPGRIP1LQ68CZ1 1315 aa11.88□□□□□ -0.51
ITGA9-204ENST00000461533 C19orf44Q9H6X5 657 aa11.88□□□□□ -0.51
ITGA9-204ENST00000461533 DCCP43146 1447 aa11.87□□□□□ -0.51
ITGA9-204ENST00000461533 VGFO15240 615 aaPredicted RBP11.87□□□□□ -0.51
ITGA9-204ENST00000461533 CADPS2Q86UW7 1296 aa11.87□□□□□ -0.51
ITGA9-204ENST00000461533 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.86□□□□□ -0.51
ITGA9-204ENST00000461533 METP08581 1390 aa11.86□□□□□ -0.51
ITGA9-204ENST00000461533 C14orf37Q86TY3 774 aa11.85□□□□□ -0.51
ITGA9-204ENST00000461533 ATF3P18847 181 aa11.84□□□□□ -0.51
ITGA9-204ENST00000461533 MPHOSPH9Q99550 1183 aa11.84□□□□□ -0.51
ITGA9-204ENST00000461533 CCDC144AA2RUR9 1427 aa11.84□□□□□ -0.51
ITGA9-204ENST00000461533 PRAG1Q86YV5 1406 aa11.84□□□□□ -0.51
ITGA9-204ENST00000461533 PPLO60437 1756 aa11.83□□□□□ -0.52
ITGA9-204ENST00000461533 SETD5Q9C0A6 1442 aa11.83□□□□□ -0.52
ITGA9-204ENST00000461533 SETD1AO15047 1707 aaKnown RBP11.83□□□□□ -0.52
ITGA9-204ENST00000461533 PHF23Q9BUL5 403 aaPredicted RBP11.82□□□□□ -0.52
ITGA9-204ENST00000461533 PTCH1Q13635 1447 aa11.82□□□□□ -0.52
ITGA9-204ENST00000461533 SPATA31E1Q6ZUB1 1445 aa11.82□□□□□ -0.52
ITGA9-204ENST00000461533 PHLPP1O60346 1717 aa11.82□□□□□ -0.52
ITGA9-204ENST00000461533 AHDC1Q5TGY3 1603 aaPredicted RBP11.82□□□□□ -0.52
ITGA9-204ENST00000461533 ADGRL3Q9HAR2 1447 aa11.81□□□□□ -0.52
ITGA9-204ENST00000461533 FOXD1Q16676 465 aa11.81□□□□□ -0.52
ITGA9-204ENST00000461533 COL16A1Q07092 1604 aaPredicted RBP11.81□□□□□ -0.52
ITGA9-204ENST00000461533 ANKRD30BQ9BXX2 1392 aa11.8□□□□□ -0.52
ITGA9-204ENST00000461533 JCADQ9P266 1359 aa11.8□□□□□ -0.52
ITGA9-204ENST00000461533 MST1RQ04912 1400 aa11.79□□□□□ -0.52
ITGA9-204ENST00000461533 BRINP3Q76B58 766 aa11.78□□□□□ -0.52
ITGA9-204ENST00000461533 NALCNQ8IZF0 1738 aa11.77□□□□□ -0.52
ITGA9-204ENST00000461533 IFT172Q9UG01 1749 aa11.77□□□□□ -0.52
ITGA9-204ENST00000461533 RGS17Q9UGC6 210 aaPredicted RBP11.77□□□□□ -0.53
ITGA9-204ENST00000461533 RAB3GAP2Q9H2M9 1393 aa11.77□□□□□ -0.53
ITGA9-204ENST00000461533 ROBO2Q9HCK4 1378 aa11.77□□□□□ -0.53
ITGA9-204ENST00000461533 ASXL1Q8IXJ9 1541 aa11.76□□□□□ -0.53
ITGA9-204ENST00000461533 HRCP23327 699 aa11.76□□□□□ -0.53
ITGA9-204ENST00000461533 SPATA31A6Q5VVP1 1343 aa11.76□□□□□ -0.53
ITGA9-204ENST00000461533 ADGRF5Q8IZF2 1346 aa11.76□□□□□ -0.53
ITGA9-204ENST00000461533 SHPRHQ149N8 1683 aa11.75□□□□□ -0.53
ITGA9-204ENST00000461533 TECPR2O15040 1411 aa11.75□□□□□ -0.53
ITGA9-204ENST00000461533 PIK3C2GO75747 1445 aa11.75□□□□□ -0.53
ITGA9-204ENST00000461533 NHSL1Q5SYE7 1610 aa11.75□□□□□ -0.53
ITGA9-204ENST00000461533 RGL3Q3MIN7 710 aa11.74□□□□□ -0.53
ITGA9-204ENST00000461533 LAMC1P11047 1609 aa11.73□□□□□ -0.53
ITGA9-204ENST00000461533 LRPPRCP42704 1394 aaKnown RBP11.73□□□□□ -0.53
ITGA9-204ENST00000461533 ABCC11Q96J66 1382 aa11.73□□□□□ -0.53
ITGA9-204ENST00000461533 MYOM2P54296 1465 aa11.72□□□□□ -0.53
ITGA9-204ENST00000461533 C1orf167Q5SNV9 1468 aa11.72□□□□□ -0.53
ITGA9-204ENST00000461533 NRXN1Q9ULB1 1477 aa11.72□□□□□ -0.53
ITGA9-204ENST00000461533 CDC42BPGQ6DT37 1551 aa11.71□□□□□ -0.53
ITGA9-204ENST00000461533 LRRC59Q96AG4 307 aaKnown RBP11.71□□□□□ -0.53
ITGA9-204ENST00000461533 KNDC1Q76NI1 1749 aa11.71□□□□□ -0.54
ITGA9-204ENST00000461533 LRP6O75581 1613 aa11.71□□□□□ -0.54
ITGA9-204ENST00000461533 SIRT1Q96EB6 747 aa11.7□□□□□ -0.54
ITGA9-204ENST00000461533 POTEAQ6S8J7 498 aa11.69□□□□□ -0.54
ITGA9-204ENST00000461533 C14orf93Q9H972 538 aaKnown RBP11.69□□□□□ -0.54
ITGA9-204ENST00000461533 YTHDC2Q9H6S0 1430 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms