RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 TRPM2O94759 1503 aa30.47■■■□□ 2.47
SCAF8-204ENST00000461219 CPS1P31327 1500 aa30.47■■■□□ 2.47
SCAF8-204ENST00000461219 IQSEC2Q5JU85 1478 aa30.46■■■□□ 2.47
SCAF8-204ENST00000461219 CLTCL1P53675 1640 aa30.45■■■□□ 2.47
SCAF8-204ENST00000461219 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.45■■■□□ 2.47
SCAF8-204ENST00000461219 ZNF326Q5BKZ1 582 aaKnown RBP30.44■■■□□ 2.46
SCAF8-204ENST00000461219 SENP3Q9H4L4 574 aaPredicted RBP30.44■■■□□ 2.46
SCAF8-204ENST00000461219 ZFYVE9O95405 1425 aa30.4■■■□□ 2.46
SCAF8-204ENST00000461219 RAB3GAP2Q9H2M9 1393 aa30.4■■■□□ 2.46
SCAF8-204ENST00000461219 STRCP1A6NGW2 1772 aa30.39■■■□□ 2.46
SCAF8-204ENST00000461219 NUTM2DQ5VT03 806 aaPredicted RBP30.39■■■□□ 2.46
SCAF8-204ENST00000461219 MPHOSPH9Q99550 1183 aa30.39■■■□□ 2.46
SCAF8-204ENST00000461219 SLC26A8Q96RN1 970 aa30.38■■■□□ 2.45
SCAF8-204ENST00000461219 FOXD1Q16676 465 aa30.36■■■□□ 2.45
SCAF8-204ENST00000461219 PLEKHG1Q9ULL1 1385 aa30.36■■■□□ 2.45
SCAF8-204ENST00000461219 UBAP1LF5GYI3 381 aa30.32■■■□□ 2.44
SCAF8-204ENST00000461219 CCDC144AA2RUR9 1427 aa30.29■■■□□ 2.44
SCAF8-204ENST00000461219 DIP2AQ14689 1571 aa30.25■■■□□ 2.43
SCAF8-204ENST00000461219 CHD2O14647 1828 aaKnown RBP30.24■■■□□ 2.43
SCAF8-204ENST00000461219 LRRC7Q96NW7 1537 aa30.24■■■□□ 2.43
SCAF8-204ENST00000461219 SCAF1Q9H7N4 1312 aaKnown RBP30.23■■■□□ 2.43
SCAF8-204ENST00000461219 KCNA6P17658 529 aa30.23■■■□□ 2.43
SCAF8-204ENST00000461219 NEXMIFQ5QGS0 1516 aa30.22■■■□□ 2.43
SCAF8-204ENST00000461219 TOM1O60784 492 aa30.22■■■□□ 2.43
SCAF8-204ENST00000461219 TBX22Q9Y458 520 aa30.2■■■□□ 2.43
SCAF8-204ENST00000461219 PPLO60437 1756 aa30.19■■■□□ 2.42
SCAF8-204ENST00000461219 PROSER2Q86WR7 435 aaPredicted RBP30.19■■■□□ 2.42
SCAF8-204ENST00000461219 XIRP1Q702N8 1843 aaKnown RBP30.19■■■□□ 2.42
SCAF8-204ENST00000461219 NWD1Q149M9 1564 aa30.18■■■□□ 2.42
SCAF8-204ENST00000461219 HRCP23327 699 aa30.17■■■□□ 2.42
SCAF8-204ENST00000461219 NKTRP30414 1462 aaKnown RBP30.17■■■□□ 2.42
SCAF8-204ENST00000461219 VGFO15240 615 aaPredicted RBP30.16■■■□□ 2.42
SCAF8-204ENST00000461219 RPGRIP1LQ68CZ1 1315 aa30.16■■■□□ 2.42
SCAF8-204ENST00000461219 ADAMTS13Q76LX8 1427 aa30.15■■■□□ 2.42
SCAF8-204ENST00000461219 PIP4K2BP78356 416 aa30.15■■■□□ 2.42
SCAF8-204ENST00000461219 SETBP1Q9Y6X0 1596 aa30.15■■■□□ 2.42
SCAF8-204ENST00000461219 RGL3Q3MIN7 710 aa30.14■■■□□ 2.42
SCAF8-204ENST00000461219 NRXN3Q9Y4C0 1643 aa30.13■■■□□ 2.41
SCAF8-204ENST00000461219 TMEM94Q12767 1356 aa30.11■■■□□ 2.41
SCAF8-204ENST00000461219 PIK3R4Q99570 1358 aa30.11■■■□□ 2.41
SCAF8-204ENST00000461219 C14orf37Q86TY3 774 aa30.08■■■□□ 2.41
SCAF8-204ENST00000461219 RBM33Q96EV2 1170 aaKnown RBP30.07■■■□□ 2.4
SCAF8-204ENST00000461219 IFT172Q9UG01 1749 aa30.06■■■□□ 2.4
SCAF8-204ENST00000461219 AMOTL2Q9Y2J4 779 aa30.04■■■□□ 2.4
SCAF8-204ENST00000461219 SPATA31E1Q6ZUB1 1445 aa30.04■■■□□ 2.4
SCAF8-204ENST00000461219 MSH6P52701 1360 aa30.03■■■□□ 2.4
SCAF8-204ENST00000461219 ANKRD30BQ9BXX2 1392 aa30.02■■■□□ 2.4
SCAF8-204ENST00000461219 XRN1Q8IZH2 1706 aaKnown RBP29.99■■■□□ 2.39
SCAF8-204ENST00000461219 ALKQ9UM73 1620 aa29.98■■■□□ 2.39
SCAF8-204ENST00000461219 METP08581 1390 aa29.98■■■□□ 2.39
SCAF8-204ENST00000461219 PTPRUQ92729 1446 aa29.96■■■□□ 2.39
SCAF8-204ENST00000461219 SETD1AO15047 1707 aaKnown RBP29.96■■■□□ 2.39
SCAF8-204ENST00000461219 ADGRF5Q8IZF2 1346 aa29.93■■■□□ 2.38
SCAF8-204ENST00000461219 TRIM26Q12899 539 aaPredicted RBP29.92■■■□□ 2.38
SCAF8-204ENST00000461219 NCOA3Q9Y6Q9 1424 aa29.92■■■□□ 2.38
SCAF8-204ENST00000461219 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.9■■■□□ 2.38
SCAF8-204ENST00000461219 ATF3P18847 181 aa29.88■■■□□ 2.37
SCAF8-204ENST00000461219 HSPA1LP34931 641 aa29.88■■■□□ 2.37
SCAF8-204ENST00000461219 C19orf44Q9H6X5 657 aa29.85■■■□□ 2.37
SCAF8-204ENST00000461219 ROBO1Q9Y6N7 1651 aa29.85■■■□□ 2.37
SCAF8-204ENST00000461219 MYOM2P54296 1465 aa29.84■■■□□ 2.37
SCAF8-204ENST00000461219 LAMC1P11047 1609 aa29.84■■■□□ 2.37
SCAF8-204ENST00000461219 PIK3C2GO75747 1445 aa29.83■■■□□ 2.37
SCAF8-204ENST00000461219 CADPS2Q86UW7 1296 aa29.83■■■□□ 2.37
SCAF8-204ENST00000461219 SLAIN2Q9P270 581 aa29.82■■■□□ 2.36
SCAF8-204ENST00000461219 KDM2AQ9Y2K7 1162 aa29.82■■■□□ 2.36
SCAF8-204ENST00000461219 DCAF11Q8TEB1 546 aa29.81■■■□□ 2.36
SCAF8-204ENST00000461219 PTCH1Q13635 1447 aa29.79■■■□□ 2.36
SCAF8-204ENST00000461219 NALCNQ8IZF0 1738 aa29.79■■■□□ 2.36
SCAF8-204ENST00000461219 STK26Q9P289 416 aa29.79■■■□□ 2.36
SCAF8-204ENST00000461219 FAM135BQ49AJ0 1406 aa29.79■■■□□ 2.36
SCAF8-204ENST00000461219 TMEM132EQ6IEE7 984 aa29.75■■■□□ 2.35
SCAF8-204ENST00000461219 KNDC1Q76NI1 1749 aa29.75■■■□□ 2.35
SCAF8-204ENST00000461219 ADGRL3Q9HAR2 1447 aa29.75■■■□□ 2.35
SCAF8-204ENST00000461219 NRXN1Q9ULB1 1477 aa29.74■■■□□ 2.35
SCAF8-204ENST00000461219 DCCP43146 1447 aa29.74■■■□□ 2.35
SCAF8-204ENST00000461219 ROBO2Q9HCK4 1378 aa29.74■■■□□ 2.35
SCAF8-204ENST00000461219 STAC3Q96MF2 364 aa29.73■■■□□ 2.35
SCAF8-204ENST00000461219 PHLPP1O60346 1717 aa29.72■■■□□ 2.35
SCAF8-204ENST00000461219 CFAP70Q5T0N1 1121 aa29.72■■■□□ 2.35
SCAF8-204ENST00000461219 C14orf93Q9H972 538 aaKnown RBP29.72■■■□□ 2.35
SCAF8-204ENST00000461219 LRPPRCP42704 1394 aaKnown RBP29.71■■■□□ 2.35
SCAF8-204ENST00000461219 DHX57Q6P158 1386 aaKnown RBP29.71■■■□□ 2.35
SCAF8-204ENST00000461219 ASXL1Q8IXJ9 1541 aa29.69■■■□□ 2.34
SCAF8-204ENST00000461219 PRAG1Q86YV5 1406 aa29.69■■■□□ 2.34
SCAF8-204ENST00000461219 YTHDC2Q9H6S0 1430 aaKnown RBP29.69■■■□□ 2.34
SCAF8-204ENST00000461219 DISP3Q9P2K9 1392 aa29.65■■■□□ 2.34
SCAF8-204ENST00000461219 ABCC11Q96J66 1382 aa29.64■■■□□ 2.34
SCAF8-204ENST00000461219 TECPR2O15040 1411 aa29.64■■■□□ 2.34
SCAF8-204ENST00000461219 NEUROD1Q13562 356 aa29.63■■■□□ 2.33
SCAF8-204ENST00000461219 MST1RQ04912 1400 aa29.62■■■□□ 2.33
SCAF8-204ENST00000461219 WAPLQ7Z5K2 1190 aa29.61■■■□□ 2.33
SCAF8-204ENST00000461219 SIN3AQ96ST3 1273 aa29.58■■■□□ 2.33
SCAF8-204ENST00000461219 POGKQ9P215 609 aa29.57■■■□□ 2.32
SCAF8-204ENST00000461219 MED1Q15648 1581 aaPredicted RBP29.56■■■□□ 2.32
SCAF8-204ENST00000461219 CDC42BPGQ6DT37 1551 aa29.56■■■□□ 2.32
SCAF8-204ENST00000461219 BRINP3Q76B58 766 aa29.56■■■□□ 2.32
SCAF8-204ENST00000461219 KIAA1210Q9ULL0 1709 aa29.54■■■□□ 2.32
SCAF8-204ENST00000461219 PLEKHH1Q9ULM0 1364 aa29.54■■■□□ 2.32
SCAF8-204ENST00000461219 AHDC1Q5TGY3 1603 aaPredicted RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms