RNA–Protein interactions for RNA: ENST00000460834.1

LST1-218, leukocyte specific transcript 1, humanhuman

TSL 3

Gene LST1, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-218ENST00000460834 XIRP1Q702N8 1843 aaKnown RBP28.57■■■□□ 2.16
LST1-218ENST00000460834 SLC26A8Q96RN1 970 aa28.57■■■□□ 2.16
LST1-218ENST00000460834 PLEKHG1Q9ULL1 1385 aa28.56■■■□□ 2.16
LST1-218ENST00000460834 UBAP1LF5GYI3 381 aa28.55■■■□□ 2.16
LST1-218ENST00000460834 SLC4A1APQ9BWU0 796 aaKnown RBP28.55■■■□□ 2.16
LST1-218ENST00000460834 HDGFP51858 240 aaKnown RBP28.54■■■□□ 2.16
LST1-218ENST00000460834 KIF1BO60333 1816 aa28.53■■■□□ 2.16
LST1-218ENST00000460834 NUTM2DQ5VT03 806 aaPredicted RBP28.53■■■□□ 2.16
LST1-218ENST00000460834 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.52■■■□□ 2.16
LST1-218ENST00000460834 SENP3Q9H4L4 574 aaPredicted RBP28.52■■■□□ 2.16
LST1-218ENST00000460834 ALKQ9UM73 1620 aa28.51■■■□□ 2.15
LST1-218ENST00000460834 CHD2O14647 1828 aaKnown RBP28.51■■■□□ 2.15
LST1-218ENST00000460834 SETD5Q9C0A6 1442 aa28.51■■■□□ 2.15
LST1-218ENST00000460834 KCNA6P17658 529 aa28.49■■■□□ 2.15
LST1-218ENST00000460834 PPP1R15AO75807 674 aaPredicted RBP28.48■■■□□ 2.15
LST1-218ENST00000460834 ADAMTS13Q76LX8 1427 aa28.47■■■□□ 2.15
LST1-218ENST00000460834 BCANQ96GW7 911 aa28.47■■■□□ 2.15
LST1-218ENST00000460834 NWD1Q149M9 1564 aa28.46■■■□□ 2.15
LST1-218ENST00000460834 FOXD1Q16676 465 aa28.46■■■□□ 2.15
LST1-218ENST00000460834 MPHOSPH9Q99550 1183 aa28.46■■■□□ 2.15
LST1-218ENST00000460834 TBX22Q9Y458 520 aa28.46■■■□□ 2.15
LST1-218ENST00000460834 NRXN3Q9Y4C0 1643 aa28.43■■■□□ 2.14
LST1-218ENST00000460834 NEXMIFQ5QGS0 1516 aa28.43■■■□□ 2.14
LST1-218ENST00000460834 TOM1O60784 492 aa28.41■■■□□ 2.14
LST1-218ENST00000460834 ZNF326Q5BKZ1 582 aaKnown RBP28.41■■■□□ 2.14
LST1-218ENST00000460834 RAB3GAP2Q9H2M9 1393 aa28.4■■■□□ 2.14
LST1-218ENST00000460834 DIP2AQ14689 1571 aa28.39■■■□□ 2.14
LST1-218ENST00000460834 ACIN1Q9UKV3 1341 aaKnown RBP28.37■■■□□ 2.13
LST1-218ENST00000460834 SETBP1Q9Y6X0 1596 aa28.37■■■□□ 2.13
LST1-218ENST00000460834 TMEM94Q12767 1356 aa28.37■■■□□ 2.13
LST1-218ENST00000460834 NKTRP30414 1462 aaKnown RBP28.36■■■□□ 2.13
LST1-218ENST00000460834 PROSER2Q86WR7 435 aaPredicted RBP28.36■■■□□ 2.13
LST1-218ENST00000460834 PIP4K2BP78356 416 aa28.35■■■□□ 2.13
LST1-218ENST00000460834 RBM33Q96EV2 1170 aaKnown RBP28.34■■■□□ 2.13
LST1-218ENST00000460834 PPLO60437 1756 aa28.33■■■□□ 2.13
LST1-218ENST00000460834 PIK3R4Q99570 1358 aa28.32■■■□□ 2.12
LST1-218ENST00000460834 PTPRUQ92729 1446 aa28.32■■■□□ 2.12
LST1-218ENST00000460834 RPGRIP1LQ68CZ1 1315 aa28.28■■■□□ 2.12
LST1-218ENST00000460834 SCAF1Q9H7N4 1312 aaKnown RBP28.28■■■□□ 2.12
LST1-218ENST00000460834 CCDC144AA2RUR9 1427 aa28.27■■■□□ 2.12
LST1-218ENST00000460834 SPATA31E1Q6ZUB1 1445 aa28.26■■■□□ 2.12
LST1-218ENST00000460834 HRCP23327 699 aa28.26■■■□□ 2.11
LST1-218ENST00000460834 HSPA1LP34931 641 aa28.26■■■□□ 2.11
LST1-218ENST00000460834 SETD1AO15047 1707 aaKnown RBP28.26■■■□□ 2.11
LST1-218ENST00000460834 XRN1Q8IZH2 1706 aaKnown RBP28.25■■■□□ 2.11
LST1-218ENST00000460834 METP08581 1390 aa28.24■■■□□ 2.11
LST1-218ENST00000460834 IFT172Q9UG01 1749 aa28.24■■■□□ 2.11
LST1-218ENST00000460834 AMOTL2Q9Y2J4 779 aa28.24■■■□□ 2.11
LST1-218ENST00000460834 VGFO15240 615 aaPredicted RBP28.23■■■□□ 2.11
LST1-218ENST00000460834 NCOA3Q9Y6Q9 1424 aa28.2■■■□□ 2.11
LST1-218ENST00000460834 RGL3Q3MIN7 710 aa28.18■■■□□ 2.1
LST1-218ENST00000460834 MSH6P52701 1360 aa28.16■■■□□ 2.1
LST1-218ENST00000460834 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.16■■■□□ 2.1
LST1-218ENST00000460834 FAM135BQ49AJ0 1406 aa28.15■■■□□ 2.1
LST1-218ENST00000460834 ADGRF5Q8IZF2 1346 aa28.15■■■□□ 2.1
LST1-218ENST00000460834 ANKRD30BQ9BXX2 1392 aa28.14■■■□□ 2.1
LST1-218ENST00000460834 ROBO1Q9Y6N7 1651 aa28.12■■■□□ 2.09
LST1-218ENST00000460834 C19orf44Q9H6X5 657 aa28.09■■■□□ 2.09
LST1-218ENST00000460834 SLAIN2Q9P270 581 aa28.09■■■□□ 2.09
LST1-218ENST00000460834 C14orf37Q86TY3 774 aa28.05■■■□□ 2.08
LST1-218ENST00000460834 PRAG1Q86YV5 1406 aa28.03■■■□□ 2.08
LST1-218ENST00000460834 NALCNQ8IZF0 1738 aa28.02■■■□□ 2.08
LST1-218ENST00000460834 PIK3C2GO75747 1445 aa28.01■■■□□ 2.08
LST1-218ENST00000460834 ROBO2Q9HCK4 1378 aa28.01■■■□□ 2.07
LST1-218ENST00000460834 NRXN1Q9ULB1 1477 aa28.01■■■□□ 2.07
LST1-218ENST00000460834 DISP3Q9P2K9 1392 aa28■■■□□ 2.07
LST1-218ENST00000460834 CADPS2Q86UW7 1296 aa28■■■□□ 2.07
LST1-218ENST00000460834 ASXL1Q8IXJ9 1541 aa28■■■□□ 2.07
LST1-218ENST00000460834 PTCH1Q13635 1447 aa28■■■□□ 2.07
LST1-218ENST00000460834 ATF3P18847 181 aa27.99■■■□□ 2.07
LST1-218ENST00000460834 MYOM2P54296 1465 aa27.98■■■□□ 2.07
LST1-218ENST00000460834 DCCP43146 1447 aa27.97■■■□□ 2.07
LST1-218ENST00000460834 ADGRL3Q9HAR2 1447 aa27.97■■■□□ 2.07
LST1-218ENST00000460834 MED1Q15648 1581 aaPredicted RBP27.95■■■□□ 2.07
LST1-218ENST00000460834 C14orf93Q9H972 538 aaKnown RBP27.95■■■□□ 2.06
LST1-218ENST00000460834 PHLPP1O60346 1717 aa27.95■■■□□ 2.06
LST1-218ENST00000460834 TMEM132EQ6IEE7 984 aa27.94■■■□□ 2.06
LST1-218ENST00000460834 MST1RQ04912 1400 aa27.92■■■□□ 2.06
LST1-218ENST00000460834 KNDC1Q76NI1 1749 aa27.92■■■□□ 2.06
LST1-218ENST00000460834 LRPPRCP42704 1394 aaKnown RBP27.91■■■□□ 2.06
LST1-218ENST00000460834 TECPR2O15040 1411 aa27.91■■■□□ 2.06
LST1-218ENST00000460834 CFAP70Q5T0N1 1121 aa27.9■■■□□ 2.06
LST1-218ENST00000460834 LAMC1P11047 1609 aa27.89■■■□□ 2.06
LST1-218ENST00000460834 DHX57Q6P158 1386 aaKnown RBP27.89■■■□□ 2.06
LST1-218ENST00000460834 ABCC11Q96J66 1382 aa27.89■■■□□ 2.06
LST1-218ENST00000460834 STK26Q9P289 416 aa27.89■■■□□ 2.06
LST1-218ENST00000460834 COL16A1Q07092 1604 aaPredicted RBP27.89■■■□□ 2.05
LST1-218ENST00000460834 BRINP3Q76B58 766 aa27.88■■■□□ 2.05
LST1-218ENST00000460834 YTHDC2Q9H6S0 1430 aaKnown RBP27.87■■■□□ 2.05
LST1-218ENST00000460834 AHDC1Q5TGY3 1603 aaPredicted RBP27.87■■■□□ 2.05
LST1-218ENST00000460834 ILDR2Q71H61 639 aa27.86■■■□□ 2.05
LST1-218ENST00000460834 WAPLQ7Z5K2 1190 aa27.85■■■□□ 2.05
LST1-218ENST00000460834 DCAF11Q8TEB1 546 aa27.85■■■□□ 2.05
LST1-218ENST00000460834 KDM2AQ9Y2K7 1162 aa27.84■■■□□ 2.05
LST1-218ENST00000460834 PLEKHH1Q9ULM0 1364 aa27.82■■■□□ 2.04
LST1-218ENST00000460834 NHSL1Q5SYE7 1610 aa27.81■■■□□ 2.04
LST1-218ENST00000460834 SIRT1Q96EB6 747 aa27.81■■■□□ 2.04
LST1-218ENST00000460834 C1orf167Q5SNV9 1468 aa27.8■■■□□ 2.04
LST1-218ENST00000460834 ADGRB1O14514 1584 aa27.8■■■□□ 2.04
LST1-218ENST00000460834 STAC3Q96MF2 364 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms