RNA–Protein interactions for RNA: ENST00000460721.1

LDOC1-202, Transcript of LDOC1, regulator of NFKB signaling, humanhuman

TSL 1 (best)

Gene LDOC1, Length 784 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDOC1-202ENST00000460721 RIMS2Q9UQ26 1411 aa23.05■■□□□ 1.28
LDOC1-202ENST00000460721 ACIN1Q9UKV3 1341 aaKnown RBP23.05■■□□□ 1.28
LDOC1-202ENST00000460721 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
LDOC1-202ENST00000460721 CLTCL1P53675 1640 aa23.04■■□□□ 1.28
LDOC1-202ENST00000460721 HDGFP51858 240 aaKnown RBP23.02■■□□□ 1.28
LDOC1-202ENST00000460721 PLEKHG1Q9ULL1 1385 aa23.01■■□□□ 1.27
LDOC1-202ENST00000460721 CHGAP10645 457 aaKnown RBP23■■□□□ 1.27
LDOC1-202ENST00000460721 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.99■■□□□ 1.27
LDOC1-202ENST00000460721 MPHOSPH9Q99550 1183 aa22.99■■□□□ 1.27
LDOC1-202ENST00000460721 KIF1BO60333 1816 aa22.98■■□□□ 1.27
LDOC1-202ENST00000460721 RAB3GAP2Q9H2M9 1393 aa22.97■■□□□ 1.27
LDOC1-202ENST00000460721 LRRC7Q96NW7 1537 aa22.95■■□□□ 1.26
LDOC1-202ENST00000460721 SLC26A8Q96RN1 970 aa22.95■■□□□ 1.26
LDOC1-202ENST00000460721 HRCP23327 699 aa22.94■■□□□ 1.26
LDOC1-202ENST00000460721 ADAMTS13Q76LX8 1427 aa22.92■■□□□ 1.26
LDOC1-202ENST00000460721 KCNA6P17658 529 aa22.92■■□□□ 1.26
LDOC1-202ENST00000460721 FOXD1Q16676 465 aa22.92■■□□□ 1.26
LDOC1-202ENST00000460721 TBX22Q9Y458 520 aa22.92■■□□□ 1.26
LDOC1-202ENST00000460721 PPP1R15AO75807 674 aaPredicted RBP22.91■■□□□ 1.26
LDOC1-202ENST00000460721 NWD1Q149M9 1564 aa22.91■■□□□ 1.26
LDOC1-202ENST00000460721 NEXMIFQ5QGS0 1516 aa22.91■■□□□ 1.26
LDOC1-202ENST00000460721 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
LDOC1-202ENST00000460721 XIRP1Q702N8 1843 aaKnown RBP22.9■■□□□ 1.26
LDOC1-202ENST00000460721 NUTM2DQ5VT03 806 aaPredicted RBP22.89■■□□□ 1.25
LDOC1-202ENST00000460721 DIP2AQ14689 1571 aa22.89■■□□□ 1.25
LDOC1-202ENST00000460721 NRXN3Q9Y4C0 1643 aa22.88■■□□□ 1.25
LDOC1-202ENST00000460721 SETBP1Q9Y6X0 1596 aa22.87■■□□□ 1.25
LDOC1-202ENST00000460721 ALKQ9UM73 1620 aa22.86■■□□□ 1.25
LDOC1-202ENST00000460721 UBAP1LF5GYI3 381 aa22.86■■□□□ 1.25
LDOC1-202ENST00000460721 ZNF326Q5BKZ1 582 aaKnown RBP22.86■■□□□ 1.25
LDOC1-202ENST00000460721 PIK3R4Q99570 1358 aa22.86■■□□□ 1.25
LDOC1-202ENST00000460721 BCANQ96GW7 911 aa22.85■■□□□ 1.25
LDOC1-202ENST00000460721 NKTRP30414 1462 aaKnown RBP22.85■■□□□ 1.25
LDOC1-202ENST00000460721 RPGRIP1LQ68CZ1 1315 aa22.84■■□□□ 1.25
LDOC1-202ENST00000460721 CCDC144AA2RUR9 1427 aa22.83■■□□□ 1.25
LDOC1-202ENST00000460721 SPATA31E1Q6ZUB1 1445 aa22.82■■□□□ 1.24
LDOC1-202ENST00000460721 PPLO60437 1756 aa22.82■■□□□ 1.24
LDOC1-202ENST00000460721 TOM1O60784 492 aa22.81■■□□□ 1.24
LDOC1-202ENST00000460721 SENP3Q9H4L4 574 aaPredicted RBP22.8■■□□□ 1.24
LDOC1-202ENST00000460721 TMEM94Q12767 1356 aa22.79■■□□□ 1.24
LDOC1-202ENST00000460721 PTPRUQ92729 1446 aa22.77■■□□□ 1.24
LDOC1-202ENST00000460721 VGFO15240 615 aaPredicted RBP22.77■■□□□ 1.24
LDOC1-202ENST00000460721 PROSER2Q86WR7 435 aaPredicted RBP22.77■■□□□ 1.24
LDOC1-202ENST00000460721 IFT172Q9UG01 1749 aa22.77■■□□□ 1.23
LDOC1-202ENST00000460721 SETD1AO15047 1707 aaKnown RBP22.76■■□□□ 1.23
LDOC1-202ENST00000460721 ANKRD30BQ9BXX2 1392 aa22.76■■□□□ 1.23
LDOC1-202ENST00000460721 NCOA3Q9Y6Q9 1424 aa22.74■■□□□ 1.23
LDOC1-202ENST00000460721 XRN1Q8IZH2 1706 aaKnown RBP22.74■■□□□ 1.23
LDOC1-202ENST00000460721 METP08581 1390 aa22.73■■□□□ 1.23
LDOC1-202ENST00000460721 AMOTL2Q9Y2J4 779 aa22.72■■□□□ 1.23
LDOC1-202ENST00000460721 RBM33Q96EV2 1170 aaKnown RBP22.7■■□□□ 1.22
LDOC1-202ENST00000460721 RGL3Q3MIN7 710 aa22.69■■□□□ 1.22
LDOC1-202ENST00000460721 ADGRF5Q8IZF2 1346 aa22.68■■□□□ 1.22
LDOC1-202ENST00000460721 PIP4K2BP78356 416 aa22.67■■□□□ 1.22
LDOC1-202ENST00000460721 PRAG1Q86YV5 1406 aa22.65■■□□□ 1.22
LDOC1-202ENST00000460721 MED1Q15648 1581 aaPredicted RBP22.64■■□□□ 1.22
LDOC1-202ENST00000460721 MSH6P52701 1360 aa22.63■■□□□ 1.21
LDOC1-202ENST00000460721 NRXN1Q9ULB1 1477 aa22.63■■□□□ 1.21
LDOC1-202ENST00000460721 FAM135BQ49AJ0 1406 aa22.63■■□□□ 1.21
LDOC1-202ENST00000460721 PIK3C2GO75747 1445 aa22.62■■□□□ 1.21
LDOC1-202ENST00000460721 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.62■■□□□ 1.21
LDOC1-202ENST00000460721 MYOM2P54296 1465 aa22.61■■□□□ 1.21
LDOC1-202ENST00000460721 HSPA1LP34931 641 aa22.61■■□□□ 1.21
LDOC1-202ENST00000460721 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
LDOC1-202ENST00000460721 C19orf44Q9H6X5 657 aa22.6■■□□□ 1.21
LDOC1-202ENST00000460721 PTCH1Q13635 1447 aa22.58■■□□□ 1.21
LDOC1-202ENST00000460721 SLAIN2Q9P270 581 aa22.56■■□□□ 1.2
LDOC1-202ENST00000460721 ASXL1Q8IXJ9 1541 aa22.56■■□□□ 1.2
LDOC1-202ENST00000460721 DCCP43146 1447 aa22.56■■□□□ 1.2
LDOC1-202ENST00000460721 ROBO1Q9Y6N7 1651 aa22.55■■□□□ 1.2
LDOC1-202ENST00000460721 C14orf93Q9H972 538 aaKnown RBP22.55■■□□□ 1.2
LDOC1-202ENST00000460721 ROBO2Q9HCK4 1378 aa22.54■■□□□ 1.2
LDOC1-202ENST00000460721 CADPS2Q86UW7 1296 aa22.54■■□□□ 1.2
LDOC1-202ENST00000460721 TRIM26Q12899 539 aaPredicted RBP22.53■■□□□ 1.2
LDOC1-202ENST00000460721 STAC3Q96MF2 364 aa22.53■■□□□ 1.2
LDOC1-202ENST00000460721 TECPR2O15040 1411 aa22.53■■□□□ 1.2
LDOC1-202ENST00000460721 DHX57Q6P158 1386 aaKnown RBP22.52■■□□□ 1.2
LDOC1-202ENST00000460721 ADGRL3Q9HAR2 1447 aa22.52■■□□□ 1.2
LDOC1-202ENST00000460721 LRPPRCP42704 1394 aaKnown RBP22.51■■□□□ 1.19
LDOC1-202ENST00000460721 NALCNQ8IZF0 1738 aa22.51■■□□□ 1.19
LDOC1-202ENST00000460721 LAMC1P11047 1609 aa22.51■■□□□ 1.19
LDOC1-202ENST00000460721 C14orf37Q86TY3 774 aa22.51■■□□□ 1.19
LDOC1-202ENST00000460721 KNDC1Q76NI1 1749 aa22.51■■□□□ 1.19
LDOC1-202ENST00000460721 ABCC11Q96J66 1382 aa22.5■■□□□ 1.19
LDOC1-202ENST00000460721 ATF3P18847 181 aa22.49■■□□□ 1.19
LDOC1-202ENST00000460721 CFAP70Q5T0N1 1121 aa22.48■■□□□ 1.19
LDOC1-202ENST00000460721 TMEM132EQ6IEE7 984 aa22.48■■□□□ 1.19
LDOC1-202ENST00000460721 MST1RQ04912 1400 aa22.47■■□□□ 1.19
LDOC1-202ENST00000460721 YTHDC2Q9H6S0 1430 aaKnown RBP22.47■■□□□ 1.19
LDOC1-202ENST00000460721 DCAF11Q8TEB1 546 aa22.46■■□□□ 1.19
LDOC1-202ENST00000460721 SIRT1Q96EB6 747 aa22.46■■□□□ 1.19
LDOC1-202ENST00000460721 ADGRB1O14514 1584 aa22.44■■□□□ 1.18
LDOC1-202ENST00000460721 KDM2AQ9Y2K7 1162 aa22.42■■□□□ 1.18
LDOC1-202ENST00000460721 STK26Q9P289 416 aa22.41■■□□□ 1.18
LDOC1-202ENST00000460721 AHDC1Q5TGY3 1603 aaPredicted RBP22.41■■□□□ 1.18
LDOC1-202ENST00000460721 BRINP3Q76B58 766 aa22.4■■□□□ 1.18
LDOC1-202ENST00000460721 WAPLQ7Z5K2 1190 aa22.4■■□□□ 1.18
LDOC1-202ENST00000460721 PHLPP1O60346 1717 aa22.4■■□□□ 1.18
LDOC1-202ENST00000460721 COL16A1Q07092 1604 aaPredicted RBP22.39■■□□□ 1.17
LDOC1-202ENST00000460721 PLEKHH1Q9ULM0 1364 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms