RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 SENP3Q9H4L4 574 aaPredicted RBP22.62■■□□□ 1.21
SLC6A1-203ENST00000460480 PLEKHG1Q9ULL1 1385 aa22.62■■□□□ 1.21
SLC6A1-203ENST00000460480 TMEM131LA2VDJ0 1609 aa22.61■■□□□ 1.21
SLC6A1-203ENST00000460480 RIMS2Q9UQ26 1411 aa22.6■■□□□ 1.21
SLC6A1-203ENST00000460480 HDGFP51858 240 aaKnown RBP22.6■■□□□ 1.21
SLC6A1-203ENST00000460480 TBX22Q9Y458 520 aa22.6■■□□□ 1.21
SLC6A1-203ENST00000460480 NWD1Q149M9 1564 aa22.58■■□□□ 1.2
SLC6A1-203ENST00000460480 GCC2Q8IWJ2 1684 aa22.58■■□□□ 1.2
SLC6A1-203ENST00000460480 MYO5BQ9ULV0 1848 aa22.57■■□□□ 1.2
SLC6A1-203ENST00000460480 E9PCH4 1651 aa22.57■■□□□ 1.2
SLC6A1-203ENST00000460480 NKTRP30414 1462 aaKnown RBP22.56■■□□□ 1.2
SLC6A1-203ENST00000460480 RGS17Q9UGC6 210 aaPredicted RBP22.56■■□□□ 1.2
SLC6A1-203ENST00000460480 PPARGC1BQ86YN6 1023 aaKnown RBP22.55■■□□□ 1.2
SLC6A1-203ENST00000460480 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.55■■□□□ 1.2
SLC6A1-203ENST00000460480 BCANQ96GW7 911 aa22.55■■□□□ 1.2
SLC6A1-203ENST00000460480 NUP155O75694 1391 aa22.54■■□□□ 1.2
SLC6A1-203ENST00000460480 IQGAP3Q86VI3 1631 aa22.54■■□□□ 1.2
SLC6A1-203ENST00000460480 CHD2O14647 1828 aaKnown RBP22.53■■□□□ 1.2
SLC6A1-203ENST00000460480 ADAMTS13Q76LX8 1427 aa22.52■■□□□ 1.2
SLC6A1-203ENST00000460480 ITGAEP38570 1179 aa22.52■■□□□ 1.2
SLC6A1-203ENST00000460480 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.2
SLC6A1-203ENST00000460480 SLAIN2Q9P270 581 aa22.52■■□□□ 1.2
SLC6A1-203ENST00000460480 PPP1R15AO75807 674 aaPredicted RBP22.51■■□□□ 1.19
SLC6A1-203ENST00000460480 CHGAP10645 457 aaKnown RBP22.51■■□□□ 1.19
SLC6A1-203ENST00000460480 NUTM2DQ5VT03 806 aaPredicted RBP22.49■■□□□ 1.19
SLC6A1-203ENST00000460480 MSH6P52701 1360 aa22.49■■□□□ 1.19
SLC6A1-203ENST00000460480 NCOA3Q9Y6Q9 1424 aa22.48■■□□□ 1.19
SLC6A1-203ENST00000460480 ROBO1Q9Y6N7 1651 aa22.47■■□□□ 1.19
SLC6A1-203ENST00000460480 PIK3R4Q99570 1358 aa22.47■■□□□ 1.19
SLC6A1-203ENST00000460480 PTPRUQ92729 1446 aa22.41■■□□□ 1.18
SLC6A1-203ENST00000460480 C19orf44Q9H6X5 657 aa22.41■■□□□ 1.18
SLC6A1-203ENST00000460480 RRBP1Q9P2E9 1410 aaKnown RBP22.4■■□□□ 1.18
SLC6A1-203ENST00000460480 AMOTL2Q9Y2J4 779 aa22.4■■□□□ 1.18
SLC6A1-203ENST00000460480 DIP2AQ14689 1571 aa22.4■■□□□ 1.18
SLC6A1-203ENST00000460480 POTEAQ6S8J7 498 aa22.38■■□□□ 1.17
SLC6A1-203ENST00000460480 NAIPQ13075 1403 aa22.37■■□□□ 1.17
SLC6A1-203ENST00000460480 CADPS2Q86UW7 1296 aa22.36■■□□□ 1.17
SLC6A1-203ENST00000460480 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.34■■□□□ 1.17
SLC6A1-203ENST00000460480 TRPM2O94759 1503 aa22.33■■□□□ 1.17
SLC6A1-203ENST00000460480 NRXN3Q9Y4C0 1643 aa22.33■■□□□ 1.17
SLC6A1-203ENST00000460480 SPHKAPQ2M3C7 1700 aa22.33■■□□□ 1.17
SLC6A1-203ENST00000460480 JCADQ9P266 1359 aa22.33■■□□□ 1.17
SLC6A1-203ENST00000460480 SETBP1Q9Y6X0 1596 aa22.33■■□□□ 1.16
SLC6A1-203ENST00000460480 METP08581 1390 aa22.32■■□□□ 1.16
SLC6A1-203ENST00000460480 PHLPP1O60346 1717 aa22.31■■□□□ 1.16
SLC6A1-203ENST00000460480 ATF3P18847 181 aa22.31■■□□□ 1.16
SLC6A1-203ENST00000460480 C14orf37Q86TY3 774 aa22.31■■□□□ 1.16
SLC6A1-203ENST00000460480 ZNF326Q5BKZ1 582 aaKnown RBP22.3■■□□□ 1.16
SLC6A1-203ENST00000460480 COL16A1Q07092 1604 aaPredicted RBP22.3■■□□□ 1.16
SLC6A1-203ENST00000460480 BRINP3Q76B58 766 aa22.28■■□□□ 1.16
SLC6A1-203ENST00000460480 XRN1Q8IZH2 1706 aaKnown RBP22.26■■□□□ 1.15
SLC6A1-203ENST00000460480 CLTCL1P53675 1640 aa22.26■■□□□ 1.15
SLC6A1-203ENST00000460480 NEXMIFQ5QGS0 1516 aa22.26■■□□□ 1.15
SLC6A1-203ENST00000460480 DCCP43146 1447 aa22.25■■□□□ 1.15
SLC6A1-203ENST00000460480 AHDC1Q5TGY3 1603 aaPredicted RBP22.25■■□□□ 1.15
SLC6A1-203ENST00000460480 HFM1A2PYH4 1435 aa22.24■■□□□ 1.15
SLC6A1-203ENST00000460480 SPATA31A6Q5VVP1 1343 aa22.24■■□□□ 1.15
SLC6A1-203ENST00000460480 LRP6O75581 1613 aa22.2■■□□□ 1.15
SLC6A1-203ENST00000460480 TRIM52Q96A61 297 aa22.2■■□□□ 1.14
SLC6A1-203ENST00000460480 MST1RQ04912 1400 aa22.2■■□□□ 1.14
SLC6A1-203ENST00000460480 VGFO15240 615 aaPredicted RBP22.19■■□□□ 1.14
SLC6A1-203ENST00000460480 SLC4A1APQ9BWU0 796 aaKnown RBP22.18■■□□□ 1.14
SLC6A1-203ENST00000460480 RPGRIP1LQ68CZ1 1315 aa22.17■■□□□ 1.14
SLC6A1-203ENST00000460480 KIF1BO60333 1816 aa22.16■■□□□ 1.14
SLC6A1-203ENST00000460480 SETD5Q9C0A6 1442 aa22.15■■□□□ 1.14
SLC6A1-203ENST00000460480 ADGRL3Q9HAR2 1447 aa22.15■■□□□ 1.14
SLC6A1-203ENST00000460480 SHPRHQ149N8 1683 aa22.15■■□□□ 1.14
SLC6A1-203ENST00000460480 ASXL1Q8IXJ9 1541 aa22.15■■□□□ 1.14
SLC6A1-203ENST00000460480 PRAG1Q86YV5 1406 aa22.12■■□□□ 1.13
SLC6A1-203ENST00000460480 ROBO2Q9HCK4 1378 aa22.12■■□□□ 1.13
SLC6A1-203ENST00000460480 DDX17Q92841 729 aaKnown RBP22.11■■□□□ 1.13
SLC6A1-203ENST00000460480 LRRC59Q96AG4 307 aaKnown RBP22.11■■□□□ 1.13
SLC6A1-203ENST00000460480 SETD1AO15047 1707 aaKnown RBP22.11■■□□□ 1.13
SLC6A1-203ENST00000460480 FOXD1Q16676 465 aa22.1■■□□□ 1.13
SLC6A1-203ENST00000460480 ZNF772Q68DY9 489 aaPredicted RBP22.1■■□□□ 1.13
SLC6A1-203ENST00000460480 PTCH1Q13635 1447 aa22.09■■□□□ 1.13
SLC6A1-203ENST00000460480 NHSL1Q5SYE7 1610 aa22.09■■□□□ 1.13
SLC6A1-203ENST00000460480 C1orf167Q5SNV9 1468 aa22.09■■□□□ 1.13
SLC6A1-203ENST00000460480 MEX3CQ5U5Q3 659 aaKnown RBP22.08■■□□□ 1.13
SLC6A1-203ENST00000460480 NALCNQ8IZF0 1738 aa22.08■■□□□ 1.12
SLC6A1-203ENST00000460480 NUTM2BA6NNL0 878 aaPredicted RBP22.06■■□□□ 1.12
SLC6A1-203ENST00000460480 NUTM2EB1AL46 878 aaPredicted RBP22.06■■□□□ 1.12
SLC6A1-203ENST00000460480 NUTM2AQ8IVF1 878 aaPredicted RBP22.06■■□□□ 1.12
SLC6A1-203ENST00000460480 ORAI2Q96SN7 254 aa22.05■■□□□ 1.12
SLC6A1-203ENST00000460480 MPHOSPH9Q99550 1183 aa22.05■■□□□ 1.12
SLC6A1-203ENST00000460480 ADGRF5Q8IZF2 1346 aa22.05■■□□□ 1.12
SLC6A1-203ENST00000460480 PPLO60437 1756 aa22.04■■□□□ 1.12
SLC6A1-203ENST00000460480 PNPLA6Q8IY17 1366 aa22.03■■□□□ 1.12
SLC6A1-203ENST00000460480 SPATA31E1Q6ZUB1 1445 aa22.03■■□□□ 1.12
SLC6A1-203ENST00000460480 SOS2Q07890 1332 aaPredicted RBP22.03■■□□□ 1.12
SLC6A1-203ENST00000460480 LAMC1P11047 1609 aa22.02■■□□□ 1.11
SLC6A1-203ENST00000460480 AFF2P51816 1311 aa22.01■■□□□ 1.11
SLC6A1-203ENST00000460480 RXRBP28702 533 aa22■■□□□ 1.11
SLC6A1-203ENST00000460480 RGL3Q3MIN7 710 aa21.99■■□□□ 1.11
SLC6A1-203ENST00000460480 UPF1Q92900 1129 aaKnown RBP eCLIP21.98■■□□□ 1.11
SLC6A1-203ENST00000460480 CCDC144AA2RUR9 1427 aa21.97■■□□□ 1.11
SLC6A1-203ENST00000460480 ANKRD30BQ9BXX2 1392 aa21.96■■□□□ 1.11
SLC6A1-203ENST00000460480 WAPLQ7Z5K2 1190 aa21.95■■□□□ 1.1
SLC6A1-203ENST00000460480 CDK12Q9NYV4 1490 aaPredicted RBP21.95■■□□□ 1.1
SLC6A1-203ENST00000460480 ABCC11Q96J66 1382 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms