RNA–Protein interactions for RNA: ENST00000459970.1

CDKN1A-205, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 5

Gene CDKN1A, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-205ENST00000459970 XIRP1Q702N8 1843 aaKnown RBP27.35■■□□□ 1.97
CDKN1A-205ENST00000459970 NKTRP30414 1462 aaKnown RBP27.35■■□□□ 1.97
CDKN1A-205ENST00000459970 SPHKAPQ2M3C7 1700 aa27.34■■□□□ 1.97
CDKN1A-205ENST00000459970 KCNA6P17658 529 aa27.34■■□□□ 1.97
CDKN1A-205ENST00000459970 HFM1A2PYH4 1435 aa27.33■■□□□ 1.97
CDKN1A-205ENST00000459970 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.33■■□□□ 1.97
CDKN1A-205ENST00000459970 PIP4K2BP78356 416 aa27.32■■□□□ 1.96
CDKN1A-205ENST00000459970 DISP3Q9P2K9 1392 aa27.32■■□□□ 1.96
CDKN1A-205ENST00000459970 SLC26A8Q96RN1 970 aa27.3■■□□□ 1.96
CDKN1A-205ENST00000459970 SCAF1Q9H7N4 1312 aaKnown RBP27.3■■□□□ 1.96
CDKN1A-205ENST00000459970 DIP2AQ14689 1571 aa27.29■■□□□ 1.96
CDKN1A-205ENST00000459970 PPP1R15AO75807 674 aaPredicted RBP27.28■■□□□ 1.96
CDKN1A-205ENST00000459970 HSPA1LP34931 641 aa27.28■■□□□ 1.96
CDKN1A-205ENST00000459970 TMEM94Q12767 1356 aa27.26■■□□□ 1.95
CDKN1A-205ENST00000459970 TRPM2O94759 1503 aa27.26■■□□□ 1.95
CDKN1A-205ENST00000459970 CHD2O14647 1828 aaKnown RBP27.25■■□□□ 1.95
CDKN1A-205ENST00000459970 CHGAP10645 457 aaKnown RBP27.24■■□□□ 1.95
CDKN1A-205ENST00000459970 TBX22Q9Y458 520 aa27.24■■□□□ 1.95
CDKN1A-205ENST00000459970 ADAMTS13Q76LX8 1427 aa27.23■■□□□ 1.95
CDKN1A-205ENST00000459970 PIK3R4Q99570 1358 aa27.22■■□□□ 1.95
CDKN1A-205ENST00000459970 BCANQ96GW7 911 aa27.22■■□□□ 1.95
CDKN1A-205ENST00000459970 PROSER2Q86WR7 435 aaPredicted RBP27.19■■□□□ 1.94
CDKN1A-205ENST00000459970 CLTCL1P53675 1640 aa27.19■■□□□ 1.94
CDKN1A-205ENST00000459970 NCOA3Q9Y6Q9 1424 aa27.17■■□□□ 1.94
CDKN1A-205ENST00000459970 FAM135BQ49AJ0 1406 aa27.16■■□□□ 1.94
CDKN1A-205ENST00000459970 SETBP1Q9Y6X0 1596 aa27.16■■□□□ 1.94
CDKN1A-205ENST00000459970 MED1Q15648 1581 aaPredicted RBP27.14■■□□□ 1.93
CDKN1A-205ENST00000459970 NRXN3Q9Y4C0 1643 aa27.12■■□□□ 1.93
CDKN1A-205ENST00000459970 MSH6P52701 1360 aa27.12■■□□□ 1.93
CDKN1A-205ENST00000459970 KIF1BO60333 1816 aa27.11■■□□□ 1.93
CDKN1A-205ENST00000459970 NEXMIFQ5QGS0 1516 aa27.11■■□□□ 1.93
CDKN1A-205ENST00000459970 NUTM2DQ5VT03 806 aaPredicted RBP27.1■■□□□ 1.93
CDKN1A-205ENST00000459970 TRIM52Q96A61 297 aa27.09■■□□□ 1.93
CDKN1A-205ENST00000459970 ILDR2Q71H61 639 aa27.08■■□□□ 1.93
CDKN1A-205ENST00000459970 ROBO1Q9Y6N7 1651 aa27.06■■□□□ 1.92
CDKN1A-205ENST00000459970 SLC4A1APQ9BWU0 796 aaKnown RBP27.06■■□□□ 1.92
CDKN1A-205ENST00000459970 SENP3Q9H4L4 574 aaPredicted RBP27.06■■□□□ 1.92
CDKN1A-205ENST00000459970 XRN1Q8IZH2 1706 aaKnown RBP27.06■■□□□ 1.92
CDKN1A-205ENST00000459970 ZNF326Q5BKZ1 582 aaKnown RBP27.05■■□□□ 1.92
CDKN1A-205ENST00000459970 RBM33Q96EV2 1170 aaKnown RBP27.04■■□□□ 1.92
CDKN1A-205ENST00000459970 PTPRUQ92729 1446 aa27.03■■□□□ 1.92
CDKN1A-205ENST00000459970 ACIN1Q9UKV3 1341 aaKnown RBP27.03■■□□□ 1.92
CDKN1A-205ENST00000459970 AMOTL2Q9Y2J4 779 aa26.99■■□□□ 1.91
CDKN1A-205ENST00000459970 RPGRIP1LQ68CZ1 1315 aa26.98■■□□□ 1.91
CDKN1A-205ENST00000459970 SLAIN2Q9P270 581 aa26.98■■□□□ 1.91
CDKN1A-205ENST00000459970 DCCP43146 1447 aa26.98■■□□□ 1.91
CDKN1A-205ENST00000459970 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.97■■□□□ 1.91
CDKN1A-205ENST00000459970 C19orf44Q9H6X5 657 aa26.96■■□□□ 1.91
CDKN1A-205ENST00000459970 SOCS7O14512 581 aa26.95■■□□□ 1.9
CDKN1A-205ENST00000459970 METP08581 1390 aa26.95■■□□□ 1.9
CDKN1A-205ENST00000459970 VGFO15240 615 aaPredicted RBP26.94■■□□□ 1.9
CDKN1A-205ENST00000459970 CADPS2Q86UW7 1296 aa26.94■■□□□ 1.9
CDKN1A-205ENST00000459970 PPLO60437 1756 aa26.94■■□□□ 1.9
CDKN1A-205ENST00000459970 SETD1AO15047 1707 aaKnown RBP26.93■■□□□ 1.9
CDKN1A-205ENST00000459970 PRAG1Q86YV5 1406 aa26.92■■□□□ 1.9
CDKN1A-205ENST00000459970 C14orf37Q86TY3 774 aa26.92■■□□□ 1.9
CDKN1A-205ENST00000459970 CCDC144AA2RUR9 1427 aa26.91■■□□□ 1.9
CDKN1A-205ENST00000459970 MPHOSPH9Q99550 1183 aa26.9■■□□□ 1.9
CDKN1A-205ENST00000459970 SETD5Q9C0A6 1442 aa26.9■■□□□ 1.9
CDKN1A-205ENST00000459970 PHLPP1O60346 1717 aa26.88■■□□□ 1.89
CDKN1A-205ENST00000459970 ATF3P18847 181 aa26.88■■□□□ 1.89
CDKN1A-205ENST00000459970 PTCH1Q13635 1447 aa26.88■■□□□ 1.89
CDKN1A-205ENST00000459970 SPATA31E1Q6ZUB1 1445 aa26.87■■□□□ 1.89
CDKN1A-205ENST00000459970 AHDC1Q5TGY3 1603 aaPredicted RBP26.87■■□□□ 1.89
CDKN1A-205ENST00000459970 PHF23Q9BUL5 403 aaPredicted RBP26.86■■□□□ 1.89
CDKN1A-205ENST00000459970 ADGRL3Q9HAR2 1447 aa26.86■■□□□ 1.89
CDKN1A-205ENST00000459970 COL16A1Q07092 1604 aaPredicted RBP26.86■■□□□ 1.89
CDKN1A-205ENST00000459970 FOXD1Q16676 465 aa26.84■■□□□ 1.89
CDKN1A-205ENST00000459970 IFT172Q9UG01 1749 aa26.82■■□□□ 1.88
CDKN1A-205ENST00000459970 JCADQ9P266 1359 aa26.82■■□□□ 1.88
CDKN1A-205ENST00000459970 ANKRD30BQ9BXX2 1392 aa26.81■■□□□ 1.88
CDKN1A-205ENST00000459970 NALCNQ8IZF0 1738 aa26.8■■□□□ 1.88
CDKN1A-205ENST00000459970 MST1RQ04912 1400 aa26.8■■□□□ 1.88
CDKN1A-205ENST00000459970 RAB3GAP2Q9H2M9 1393 aa26.77■■□□□ 1.88
CDKN1A-205ENST00000459970 ASXL1Q8IXJ9 1541 aa26.76■■□□□ 1.87
CDKN1A-205ENST00000459970 BRINP3Q76B58 766 aa26.75■■□□□ 1.87
CDKN1A-205ENST00000459970 ROBO2Q9HCK4 1378 aa26.74■■□□□ 1.87
CDKN1A-205ENST00000459970 SHPRHQ149N8 1683 aa26.73■■□□□ 1.87
CDKN1A-205ENST00000459970 NHSL1Q5SYE7 1610 aa26.72■■□□□ 1.87
CDKN1A-205ENST00000459970 PIK3C2GO75747 1445 aa26.72■■□□□ 1.87
CDKN1A-205ENST00000459970 ADGRF5Q8IZF2 1346 aa26.71■■□□□ 1.87
CDKN1A-205ENST00000459970 TECPR2O15040 1411 aa26.71■■□□□ 1.87
CDKN1A-205ENST00000459970 SPATA31A6Q5VVP1 1343 aa26.7■■□□□ 1.87
CDKN1A-205ENST00000459970 RGS17Q9UGC6 210 aaPredicted RBP26.69■■□□□ 1.86
CDKN1A-205ENST00000459970 HRCP23327 699 aa26.68■■□□□ 1.86
CDKN1A-205ENST00000459970 RGL3Q3MIN7 710 aa26.68■■□□□ 1.86
CDKN1A-205ENST00000459970 MYOM2P54296 1465 aa26.68■■□□□ 1.86
CDKN1A-205ENST00000459970 KNDC1Q76NI1 1749 aa26.67■■□□□ 1.86
CDKN1A-205ENST00000459970 NRXN1Q9ULB1 1477 aa26.67■■□□□ 1.86
CDKN1A-205ENST00000459970 LAMC1P11047 1609 aa26.66■■□□□ 1.86
CDKN1A-205ENST00000459970 LRPPRCP42704 1394 aaKnown RBP26.65■■□□□ 1.86
CDKN1A-205ENST00000459970 C1orf167Q5SNV9 1468 aa26.65■■□□□ 1.86
CDKN1A-205ENST00000459970 CDC42BPGQ6DT37 1551 aa26.65■■□□□ 1.86
CDKN1A-205ENST00000459970 ABCC11Q96J66 1382 aa26.63■■□□□ 1.85
CDKN1A-205ENST00000459970 LRP6O75581 1613 aa26.61■■□□□ 1.85
CDKN1A-205ENST00000459970 YTHDC2Q9H6S0 1430 aaKnown RBP26.56■■□□□ 1.84
CDKN1A-205ENST00000459970 LRRC59Q96AG4 307 aaKnown RBP26.56■■□□□ 1.84
CDKN1A-205ENST00000459970 C14orf93Q9H972 538 aaKnown RBP26.56■■□□□ 1.84
CDKN1A-205ENST00000459970 SIRT1Q96EB6 747 aa26.54■■□□□ 1.84
CDKN1A-205ENST00000459970 POTEAQ6S8J7 498 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms