RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.17■□□□□ 0.02
HDLBP-228ENST00000459788 HFM1A2PYH4 1435 aa15.17■□□□□ 0.02
HDLBP-228ENST00000459788 DIP2AQ14689 1571 aa15.16■□□□□ 0.02
HDLBP-228ENST00000459788 PPARGC1BQ86YN6 1023 aaKnown RBP15.16■□□□□ 0.02
HDLBP-228ENST00000459788 NKTRP30414 1462 aaKnown RBP15.15■□□□□ 0.02
HDLBP-228ENST00000459788 RIMS2Q9UQ26 1411 aa15.15■□□□□ 0.02
HDLBP-228ENST00000459788 ACIN1Q9UKV3 1341 aaKnown RBP15.15■□□□□ 0.02
HDLBP-228ENST00000459788 ALKQ9UM73 1620 aa15.14■□□□□ 0.01
HDLBP-228ENST00000459788 KCNA6P17658 529 aa15.14■□□□□ 0.01
HDLBP-228ENST00000459788 KIF1BO60333 1816 aa15.13■□□□□ 0.01
HDLBP-228ENST00000459788 TRPM2O94759 1503 aa15.12■□□□□ 0.01
HDLBP-228ENST00000459788 PIK3R4Q99570 1358 aa15.11■□□□□ 0.01
HDLBP-228ENST00000459788 TBX22Q9Y458 520 aa15.11■□□□□ 0.01
HDLBP-228ENST00000459788 NCOA3Q9Y6Q9 1424 aa15.09■□□□□ 0.01
HDLBP-228ENST00000459788 PPP1R15AO75807 674 aaPredicted RBP15.09■□□□□ 0.01
HDLBP-228ENST00000459788 SLC26A8Q96RN1 970 aa15.07■□□□□ 0
HDLBP-228ENST00000459788 SETBP1Q9Y6X0 1596 aa15.07■□□□□ 0
HDLBP-228ENST00000459788 CLTCL1P53675 1640 aa15.06■□□□□ 0
HDLBP-228ENST00000459788 TMEM94Q12767 1356 aa15.06■□□□□ 0
HDLBP-228ENST00000459788 ADAMTS13Q76LX8 1427 aa15.06■□□□□ 0
HDLBP-228ENST00000459788 CHGAP10645 457 aaKnown RBP15.05■□□□□ -0
HDLBP-228ENST00000459788 PIP4K2BP78356 416 aa15.05■□□□□ -0
HDLBP-228ENST00000459788 FAM135BQ49AJ0 1406 aa15.05■□□□□ -0
HDLBP-228ENST00000459788 DISP3Q9P2K9 1392 aa15.04■□□□□ -0
HDLBP-228ENST00000459788 PROSER2Q86WR7 435 aaPredicted RBP15.04■□□□□ -0
HDLBP-228ENST00000459788 BCANQ96GW7 911 aa15.04■□□□□ -0
HDLBP-228ENST00000459788 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
HDLBP-228ENST00000459788 HSPA1LP34931 641 aa15.03■□□□□ -0
HDLBP-228ENST00000459788 NRXN3Q9Y4C0 1643 aa15.03■□□□□ -0
HDLBP-228ENST00000459788 NEXMIFQ5QGS0 1516 aa15.02□□□□□ -0.01
HDLBP-228ENST00000459788 MSH6P52701 1360 aa15.01□□□□□ -0.01
HDLBP-228ENST00000459788 XRN1Q8IZH2 1706 aaKnown RBP15□□□□□ -0.01
HDLBP-228ENST00000459788 RPGRIP1LQ68CZ1 1315 aa15□□□□□ -0.01
HDLBP-228ENST00000459788 TRIM52Q96A61 297 aa15□□□□□ -0.01
HDLBP-228ENST00000459788 PPLO60437 1756 aa14.99□□□□□ -0.01
HDLBP-228ENST00000459788 SLC4A1APQ9BWU0 796 aaKnown RBP14.99□□□□□ -0.01
HDLBP-228ENST00000459788 ROBO1Q9Y6N7 1651 aa14.98□□□□□ -0.01
HDLBP-228ENST00000459788 MED1Q15648 1581 aaPredicted RBP14.98□□□□□ -0.01
HDLBP-228ENST00000459788 ZNF326Q5BKZ1 582 aaKnown RBP14.97□□□□□ -0.01
HDLBP-228ENST00000459788 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.97□□□□□ -0.01
HDLBP-228ENST00000459788 VGFO15240 615 aaPredicted RBP14.96□□□□□ -0.01
HDLBP-228ENST00000459788 DCCP43146 1447 aa14.96□□□□□ -0.01
HDLBP-228ENST00000459788 SETD1AO15047 1707 aaKnown RBP14.95□□□□□ -0.02
HDLBP-228ENST00000459788 PRAG1Q86YV5 1406 aa14.94□□□□□ -0.02
HDLBP-228ENST00000459788 C19orf44Q9H6X5 657 aa14.94□□□□□ -0.02
HDLBP-228ENST00000459788 PTPRUQ92729 1446 aa14.93□□□□□ -0.02
HDLBP-228ENST00000459788 SETD5Q9C0A6 1442 aa14.93□□□□□ -0.02
HDLBP-228ENST00000459788 IFT172Q9UG01 1749 aa14.93□□□□□ -0.02
HDLBP-228ENST00000459788 NUTM2DQ5VT03 806 aaPredicted RBP14.93□□□□□ -0.02
HDLBP-228ENST00000459788 CADPS2Q86UW7 1296 aa14.93□□□□□ -0.02
HDLBP-228ENST00000459788 SLAIN2Q9P270 581 aa14.93□□□□□ -0.02
HDLBP-228ENST00000459788 AMOTL2Q9Y2J4 779 aa14.93□□□□□ -0.02
HDLBP-228ENST00000459788 CCDC144AA2RUR9 1427 aa14.92□□□□□ -0.02
HDLBP-228ENST00000459788 MPHOSPH9Q99550 1183 aa14.91□□□□□ -0.02
HDLBP-228ENST00000459788 PHLPP1O60346 1717 aa14.91□□□□□ -0.02
HDLBP-228ENST00000459788 ATF3P18847 181 aa14.89□□□□□ -0.03
HDLBP-228ENST00000459788 HRCP23327 699 aa14.89□□□□□ -0.03
HDLBP-228ENST00000459788 PTCH1Q13635 1447 aa14.89□□□□□ -0.03
HDLBP-228ENST00000459788 SPATA31E1Q6ZUB1 1445 aa14.89□□□□□ -0.03
HDLBP-228ENST00000459788 AHDC1Q5TGY3 1603 aaPredicted RBP14.88□□□□□ -0.03
HDLBP-228ENST00000459788 METP08581 1390 aa14.88□□□□□ -0.03
HDLBP-228ENST00000459788 ANKRD30BQ9BXX2 1392 aa14.88□□□□□ -0.03
HDLBP-228ENST00000459788 C14orf37Q86TY3 774 aa14.88□□□□□ -0.03
HDLBP-228ENST00000459788 SOCS7O14512 581 aa14.87□□□□□ -0.03
HDLBP-228ENST00000459788 ILDR2Q71H61 639 aa14.87□□□□□ -0.03
HDLBP-228ENST00000459788 ADGRL3Q9HAR2 1447 aa14.86□□□□□ -0.03
HDLBP-228ENST00000459788 COL16A1Q07092 1604 aaPredicted RBP14.86□□□□□ -0.03
HDLBP-228ENST00000459788 RBM33Q96EV2 1170 aaKnown RBP14.86□□□□□ -0.03
HDLBP-228ENST00000459788 NALCNQ8IZF0 1738 aa14.86□□□□□ -0.03
HDLBP-228ENST00000459788 SENP3Q9H4L4 574 aaPredicted RBP14.85□□□□□ -0.03
HDLBP-228ENST00000459788 RAB3GAP2Q9H2M9 1393 aa14.84□□□□□ -0.03
HDLBP-228ENST00000459788 JCADQ9P266 1359 aa14.84□□□□□ -0.03
HDLBP-228ENST00000459788 SHPRHQ149N8 1683 aa14.84□□□□□ -0.03
HDLBP-228ENST00000459788 KNDC1Q76NI1 1749 aa14.83□□□□□ -0.03
HDLBP-228ENST00000459788 LAMC1P11047 1609 aa14.83□□□□□ -0.04
HDLBP-228ENST00000459788 NHSL1Q5SYE7 1610 aa14.83□□□□□ -0.04
HDLBP-228ENST00000459788 PHF23Q9BUL5 403 aaPredicted RBP14.82□□□□□ -0.04
HDLBP-228ENST00000459788 MST1RQ04912 1400 aa14.82□□□□□ -0.04
HDLBP-228ENST00000459788 FOXD1Q16676 465 aa14.81□□□□□ -0.04
HDLBP-228ENST00000459788 TECPR2O15040 1411 aa14.81□□□□□ -0.04
HDLBP-228ENST00000459788 PIK3C2GO75747 1445 aa14.8□□□□□ -0.04
HDLBP-228ENST00000459788 MYOM2P54296 1465 aa14.8□□□□□ -0.04
HDLBP-228ENST00000459788 ASXL1Q8IXJ9 1541 aa14.8□□□□□ -0.04
HDLBP-228ENST00000459788 SPATA31A6Q5VVP1 1343 aa14.79□□□□□ -0.04
HDLBP-228ENST00000459788 STAC3Q96MF2 364 aa14.79□□□□□ -0.04
HDLBP-228ENST00000459788 NRXN1Q9ULB1 1477 aa14.79□□□□□ -0.04
HDLBP-228ENST00000459788 BRINP3Q76B58 766 aa14.78□□□□□ -0.04
HDLBP-228ENST00000459788 CDC42BPGQ6DT37 1551 aa14.77□□□□□ -0.04
HDLBP-228ENST00000459788 ABCC11Q96J66 1382 aa14.77□□□□□ -0.04
HDLBP-228ENST00000459788 ROBO2Q9HCK4 1378 aa14.77□□□□□ -0.04
HDLBP-228ENST00000459788 LRPPRCP42704 1394 aaKnown RBP14.76□□□□□ -0.05
HDLBP-228ENST00000459788 ADGRF5Q8IZF2 1346 aa14.76□□□□□ -0.05
HDLBP-228ENST00000459788 SIRT1Q96EB6 747 aa14.76□□□□□ -0.05
HDLBP-228ENST00000459788 RGL3Q3MIN7 710 aa14.75□□□□□ -0.05
HDLBP-228ENST00000459788 C1orf167Q5SNV9 1468 aa14.74□□□□□ -0.05
HDLBP-228ENST00000459788 C14orf93Q9H972 538 aaKnown RBP14.73□□□□□ -0.05
HDLBP-228ENST00000459788 LRRC59Q96AG4 307 aaKnown RBP14.72□□□□□ -0.05
HDLBP-228ENST00000459788 YTHDC2Q9H6S0 1430 aaKnown RBP14.72□□□□□ -0.05
HDLBP-228ENST00000459788 RGS17Q9UGC6 210 aaPredicted RBP14.71□□□□□ -0.05
HDLBP-228ENST00000459788 FMN2Q9NZ56 1722 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms