RNA–Protein interactions for RNA: ENST00000458659.2

TSC22D1-203, Transcript of TSC22 domain family member 1, humanhuman

TSL 1 (best) BASIC

Gene TSC22D1, Length 4,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-203ENST00000458659 DRC7Q8IY82 874 aa16.1■□□□□ 0.17
TSC22D1-203ENST00000458659 RRP9O43818 475 aaKnown RBP16.09■□□□□ 0.17
TSC22D1-203ENST00000458659 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
TSC22D1-203ENST00000458659 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.17
TSC22D1-203ENST00000458659 PDE3AQ14432 1141 aa16.08■□□□□ 0.17
TSC22D1-203ENST00000458659 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.07■□□□□ 0.16
TSC22D1-203ENST00000458659 EFCAB5A4FU69 1503 aa16.07■□□□□ 0.16
TSC22D1-203ENST00000458659 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
TSC22D1-203ENST00000458659 DDX19BQ9UMR2 479 aa16.07■□□□□ 0.16
TSC22D1-203ENST00000458659 SUPT6HQ7KZ85 1726 aaKnown RBP16.06■□□□□ 0.16
TSC22D1-203ENST00000458659 EIF3AQ14152 1382 aaKnown RBP16.06■□□□□ 0.16
TSC22D1-203ENST00000458659 KIF3BO15066 747 aa16.06■□□□□ 0.16
TSC22D1-203ENST00000458659 PRG4Q92954 1404 aaPredicted RBP16.06■□□□□ 0.16
TSC22D1-203ENST00000458659 GGT6Q6P531 493 aa16.06■□□□□ 0.16
TSC22D1-203ENST00000458659 CHMP4BQ9H444 224 aaKnown RBP16.06■□□□□ 0.16
TSC22D1-203ENST00000458659 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
TSC22D1-203ENST00000458659 MTHFSP49914 203 aa16.04■□□□□ 0.16
TSC22D1-203ENST00000458659 TNNQ9UQP3 1299 aa16.04■□□□□ 0.16
TSC22D1-203ENST00000458659 PRDM2Q13029 1718 aa16.04■□□□□ 0.16
TSC22D1-203ENST00000458659 EXOSC9Q06265 439 aaKnown RBP16.04■□□□□ 0.16
TSC22D1-203ENST00000458659 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
TSC22D1-203ENST00000458659 TRIM6-TRIM34B2RNG4 842 aa16.04■□□□□ 0.16
TSC22D1-203ENST00000458659 SLC4A10Q6U841 1118 aa16.04■□□□□ 0.16
TSC22D1-203ENST00000458659 PRDM10Q9NQV6 1147 aa16.04■□□□□ 0.16
TSC22D1-203ENST00000458659 JPH4Q96JJ6 628 aa16.03■□□□□ 0.16
TSC22D1-203ENST00000458659 ST18O60284 1047 aa16.03■□□□□ 0.16
TSC22D1-203ENST00000458659 ABCC5O15440 1437 aa16.03■□□□□ 0.16
TSC22D1-203ENST00000458659 PRPF40AO75400 957 aaKnown RBP16.03■□□□□ 0.16
TSC22D1-203ENST00000458659 TPM2P07951 284 aa16.02■□□□□ 0.16
TSC22D1-203ENST00000458659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.02■□□□□ 0.162e-6■■□□□ 12.5
TSC22D1-203ENST00000458659 WWC1Q8IX03 1113 aa16.02■□□□□ 0.15
TSC22D1-203ENST00000458659 ERBINQ96RT1 1412 aa16.02■□□□□ 0.15
TSC22D1-203ENST00000458659 RIPK4P57078 832 aa16.01■□□□□ 0.15
TSC22D1-203ENST00000458659 CFAP70Q5T0N1 1121 aa16.01■□□□□ 0.15
TSC22D1-203ENST00000458659 MCCP23508 829 aa16.01■□□□□ 0.15
TSC22D1-203ENST00000458659 DISP3Q9P2K9 1392 aa16.01■□□□□ 0.15
TSC22D1-203ENST00000458659 GOLGA6L4A6NEF3 574 aa16.01■□□□□ 0.15
TSC22D1-203ENST00000458659 KCNJ4P48050 445 aa16■□□□□ 0.15
TSC22D1-203ENST00000458659 BIVM-ERCC5R4GMW8 1640 aa16■□□□□ 0.15
TSC22D1-203ENST00000458659 SPINK5Q9NQ38 1064 aaPredicted RBP16■□□□□ 0.15
TSC22D1-203ENST00000458659 POLA1P09884 1462 aaPredicted RBP16■□□□□ 0.15
TSC22D1-203ENST00000458659 NESP48681 1621 aa16■□□□□ 0.15
TSC22D1-203ENST00000458659 CHMP3Q9Y3E7 222 aa16■□□□□ 0.15
TSC22D1-203ENST00000458659 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
TSC22D1-203ENST00000458659 XPCQ01831 940 aaPredicted RBP15.99■□□□□ 0.15
TSC22D1-203ENST00000458659 TNPO1Q92973 898 aaKnown RBP15.99■□□□□ 0.15
TSC22D1-203ENST00000458659 SYAP1Q96A49 352 aaPredicted RBP15.99■□□□□ 0.15
TSC22D1-203ENST00000458659 NOB1Q9ULX3 412 aaKnown RBP15.99■□□□□ 0.15
TSC22D1-203ENST00000458659 CCDC173Q0VFZ6 552 aa15.99■□□□□ 0.15
TSC22D1-203ENST00000458659 PCDHB15Q9Y5E8 787 aa15.99■□□□□ 0.15
TSC22D1-203ENST00000458659 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
TSC22D1-203ENST00000458659 TBC1D32Q96NH3 1257 aa15.98■□□□□ 0.15
TSC22D1-203ENST00000458659 EPRSP07814 1512 aaKnown RBP15.98■□□□□ 0.15
TSC22D1-203ENST00000458659 UQCRHLA0A096LP55 91 aa15.98■□□□□ 0.15
TSC22D1-203ENST00000458659 UQCRHP07919 91 aa15.98■□□□□ 0.15
TSC22D1-203ENST00000458659 PLEKHH1Q9ULM0 1364 aa15.98■□□□□ 0.15
TSC22D1-203ENST00000458659 LRPPRCP42704 1394 aaKnown RBP15.98■□□□□ 0.15
TSC22D1-203ENST00000458659 OS9Q13438 667 aaPredicted RBP15.98■□□□□ 0.15
TSC22D1-203ENST00000458659 MVPQ14764 893 aaKnown RBP15.98■□□□□ 0.15
TSC22D1-203ENST00000458659 SLC12A5Q9H2X9 1139 aa15.98■□□□□ 0.15
TSC22D1-203ENST00000458659 CLCN1P35523 988 aa15.97■□□□□ 0.15
TSC22D1-203ENST00000458659 TMEM132EQ6IEE7 984 aa15.97■□□□□ 0.15
TSC22D1-203ENST00000458659 RILPL2Q969X0 211 aa15.97■□□□□ 0.15
TSC22D1-203ENST00000458659 ESF1Q9H501 851 aaKnown RBP15.97■□□□□ 0.15
TSC22D1-203ENST00000458659 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
TSC22D1-203ENST00000458659 KANK1Q14678 1352 aa15.97■□□□□ 0.15
TSC22D1-203ENST00000458659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.97■□□□□ 0.15
TSC22D1-203ENST00000458659 SSFA2P28290 1259 aa15.96■□□□□ 0.15
TSC22D1-203ENST00000458659 RARSP54136 660 aaKnown RBP15.96■□□□□ 0.15
TSC22D1-203ENST00000458659 PODXL2Q9NZ53 605 aa15.96■□□□□ 0.15
TSC22D1-203ENST00000458659 NAP1L2Q9ULW6 460 aaPredicted RBP15.95■□□□□ 0.14
TSC22D1-203ENST00000458659 KDM2BQ8NHM5 1336 aa15.95■□□□□ 0.14
TSC22D1-203ENST00000458659 BICRAQ9NZM4 1560 aa15.95■□□□□ 0.14
TSC22D1-203ENST00000458659 HMOX1P09601 288 aa15.94■□□□□ 0.14
TSC22D1-203ENST00000458659 C9orf84Q5VXU9 1444 aa15.94■□□□□ 0.14
TSC22D1-203ENST00000458659 C14orf37Q86TY3 774 aa15.94■□□□□ 0.14
TSC22D1-203ENST00000458659 ZSCAN30Q86W11 494 aa15.94■□□□□ 0.14
TSC22D1-203ENST00000458659 NKTRP30414 1462 aaKnown RBP15.93■□□□□ 0.14
TSC22D1-203ENST00000458659 ROCK1Q13464 1354 aa15.93■□□□□ 0.14
TSC22D1-203ENST00000458659 K7ELQ4 463 aaPredicted RBP15.93■□□□□ 0.14
TSC22D1-203ENST00000458659 SPAG9O60271 1321 aaKnown RBP15.93■□□□□ 0.14
TSC22D1-203ENST00000458659 NUCB2P80303 420 aa15.92■□□□□ 0.14
TSC22D1-203ENST00000458659 ZRSR1Q15695 479 aaKnown RBP15.92■□□□□ 0.14
TSC22D1-203ENST00000458659 EFCAB2Q5VUJ9 269 aa15.92■□□□□ 0.14
TSC22D1-203ENST00000458659 RLBP1P12271 317 aa15.92■□□□□ 0.14
TSC22D1-203ENST00000458659 TMEM57Q8N5G2 664 aa15.92■□□□□ 0.14
TSC22D1-203ENST00000458659 PARD3Q8TEW0 1356 aa15.91■□□□□ 0.14
TSC22D1-203ENST00000458659 ZNF592Q92610 1267 aa15.91■□□□□ 0.14
TSC22D1-203ENST00000458659 ZHX1Q9UKY1 873 aaPredicted RBP15.91■□□□□ 0.14
TSC22D1-203ENST00000458659 ZNF771Q7L3S4 317 aaPredicted RBP15.91■□□□□ 0.14
TSC22D1-203ENST00000458659 CSPP1Q1MSJ5 1256 aa15.91■□□□□ 0.14
TSC22D1-203ENST00000458659 CDC45O75419 566 aa15.9■□□□□ 0.14
TSC22D1-203ENST00000458659 HDGFL2Q7Z4V5 671 aaPredicted RBP15.9■□□□□ 0.14
TSC22D1-203ENST00000458659 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
TSC22D1-203ENST00000458659 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
TSC22D1-203ENST00000458659 FGD1P98174 961 aa15.9■□□□□ 0.14
TSC22D1-203ENST00000458659 CABP2Q9NPB3 220 aa15.9■□□□□ 0.14
TSC22D1-203ENST00000458659 ANO2Q9NQ90 1003 aa15.9■□□□□ 0.14
TSC22D1-203ENST00000458659 SYCE3A1L190 88 aa15.89■□□□□ 0.14
TSC22D1-203ENST00000458659 ATF7IPQ6VMQ6 1270 aa15.89■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms