RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 TRPM2O94759 1503 aa23.86■■□□□ 1.41
CD28-203ENST00000458610 IQGAP1P46940 1657 aa23.86■■□□□ 1.41
CD28-203ENST00000458610 FOXD1Q16676 465 aa23.83■■□□□ 1.41
CD28-203ENST00000458610 LTBP4Q8N2S1 1624 aa23.83■■□□□ 1.41
CD28-203ENST00000458610 ZFYVE9O95405 1425 aa23.83■■□□□ 1.4
CD28-203ENST00000458610 PLEKHG1Q9ULL1 1385 aa23.81■■□□□ 1.4
CD28-203ENST00000458610 CPS1P31327 1500 aa23.79■■□□□ 1.4
CD28-203ENST00000458610 CCDC144AA2RUR9 1427 aa23.79■■□□□ 1.4
CD28-203ENST00000458610 ILDR1Q86SU0 546 aaPredicted RBP23.79■■□□□ 1.4
CD28-203ENST00000458610 IQSEC2Q5JU85 1478 aa23.79■■□□□ 1.4
CD28-203ENST00000458610 RPGRIP1LQ68CZ1 1315 aa23.79■■□□□ 1.4
CD28-203ENST00000458610 SLC26A8Q96RN1 970 aa23.78■■□□□ 1.4
CD28-203ENST00000458610 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
CD28-203ENST00000458610 TBX22Q9Y458 520 aa23.77■■□□□ 1.4
CD28-203ENST00000458610 CLTCL1P53675 1640 aa23.76■■□□□ 1.39
CD28-203ENST00000458610 VGFO15240 615 aaPredicted RBP23.75■■□□□ 1.39
CD28-203ENST00000458610 KCNA6P17658 529 aa23.74■■□□□ 1.39
CD28-203ENST00000458610 MYO5BQ9ULV0 1848 aa23.74■■□□□ 1.39
CD28-203ENST00000458610 TRIM26Q12899 539 aaPredicted RBP23.73■■□□□ 1.39
CD28-203ENST00000458610 KIF1BO60333 1816 aa23.72■■□□□ 1.39
CD28-203ENST00000458610 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
CD28-203ENST00000458610 PIK3R4Q99570 1358 aa23.67■■□□□ 1.38
CD28-203ENST00000458610 RGL3Q3MIN7 710 aa23.67■■□□□ 1.38
CD28-203ENST00000458610 UBAP1LF5GYI3 381 aa23.66■■□□□ 1.38
CD28-203ENST00000458610 TOM1O60784 492 aa23.65■■□□□ 1.38
CD28-203ENST00000458610 PROSER2Q86WR7 435 aaPredicted RBP23.65■■□□□ 1.38
CD28-203ENST00000458610 ADAMTS13Q76LX8 1427 aa23.64■■□□□ 1.37
CD28-203ENST00000458610 ANKRD30BQ9BXX2 1392 aa23.64■■□□□ 1.37
CD28-203ENST00000458610 DIP2AQ14689 1571 aa23.63■■□□□ 1.37
CD28-203ENST00000458610 NEXMIFQ5QGS0 1516 aa23.63■■□□□ 1.37
CD28-203ENST00000458610 LRRC7Q96NW7 1537 aa23.62■■□□□ 1.37
CD28-203ENST00000458610 SPATA31E1Q6ZUB1 1445 aa23.61■■□□□ 1.37
CD28-203ENST00000458610 SETBP1Q9Y6X0 1596 aa23.58■■□□□ 1.37
CD28-203ENST00000458610 NKTRP30414 1462 aaKnown RBP23.58■■□□□ 1.37
CD28-203ENST00000458610 AMOTL2Q9Y2J4 779 aa23.57■■□□□ 1.36
CD28-203ENST00000458610 TMEM94Q12767 1356 aa23.56■■□□□ 1.36
CD28-203ENST00000458610 STRCP1A6NGW2 1772 aa23.56■■□□□ 1.36
CD28-203ENST00000458610 STAC3Q96MF2 364 aa23.55■■□□□ 1.36
CD28-203ENST00000458610 NWD1Q149M9 1564 aa23.53■■□□□ 1.36
CD28-203ENST00000458610 NCOA3Q9Y6Q9 1424 aa23.52■■□□□ 1.36
CD28-203ENST00000458610 ADGRF5Q8IZF2 1346 aa23.52■■□□□ 1.36
CD28-203ENST00000458610 CHD2O14647 1828 aaKnown RBP23.52■■□□□ 1.36
CD28-203ENST00000458610 C14orf37Q86TY3 774 aa23.51■■□□□ 1.35
CD28-203ENST00000458610 METP08581 1390 aa23.51■■□□□ 1.35
CD28-203ENST00000458610 SCAF1Q9H7N4 1312 aaKnown RBP23.5■■□□□ 1.35
CD28-203ENST00000458610 PPLO60437 1756 aa23.5■■□□□ 1.35
CD28-203ENST00000458610 PIP4K2BP78356 416 aa23.49■■□□□ 1.35
CD28-203ENST00000458610 MSH6P52701 1360 aa23.49■■□□□ 1.35
CD28-203ENST00000458610 NRXN3Q9Y4C0 1643 aa23.48■■□□□ 1.35
CD28-203ENST00000458610 RBM33Q96EV2 1170 aaKnown RBP23.47■■□□□ 1.35
CD28-203ENST00000458610 PTPRUQ92729 1446 aa23.46■■□□□ 1.35
CD28-203ENST00000458610 DCAF11Q8TEB1 546 aa23.45■■□□□ 1.34
CD28-203ENST00000458610 C19orf44Q9H6X5 657 aa23.45■■□□□ 1.34
CD28-203ENST00000458610 ALKQ9UM73 1620 aa23.44■■□□□ 1.34
CD28-203ENST00000458610 C14orf93Q9H972 538 aaKnown RBP23.43■■□□□ 1.34
CD28-203ENST00000458610 KDM2AQ9Y2K7 1162 aa23.43■■□□□ 1.34
CD28-203ENST00000458610 MYOM2P54296 1465 aa23.43■■□□□ 1.34
CD28-203ENST00000458610 PIK3C2GO75747 1445 aa23.42■■□□□ 1.34
CD28-203ENST00000458610 ATF3P18847 181 aa23.41■■□□□ 1.34
CD28-203ENST00000458610 CADPS2Q86UW7 1296 aa23.41■■□□□ 1.34
CD28-203ENST00000458610 IFT172Q9UG01 1749 aa23.39■■□□□ 1.34
CD28-203ENST00000458610 SLAIN2Q9P270 581 aa23.38■■□□□ 1.33
CD28-203ENST00000458610 NRXN1Q9ULB1 1477 aa23.37■■□□□ 1.33
CD28-203ENST00000458610 XIRP1Q702N8 1843 aaKnown RBP23.37■■□□□ 1.33
CD28-203ENST00000458610 DHX57Q6P158 1386 aaKnown RBP23.37■■□□□ 1.33
CD28-203ENST00000458610 XRN1Q8IZH2 1706 aaKnown RBP23.36■■□□□ 1.33
CD28-203ENST00000458610 CFAP70Q5T0N1 1121 aa23.36■■□□□ 1.33
CD28-203ENST00000458610 STK26Q9P289 416 aa23.36■■□□□ 1.33
CD28-203ENST00000458610 PTCH1Q13635 1447 aa23.35■■□□□ 1.33
CD28-203ENST00000458610 TMEM132EQ6IEE7 984 aa23.35■■□□□ 1.33
CD28-203ENST00000458610 LRPPRCP42704 1394 aaKnown RBP23.35■■□□□ 1.33
CD28-203ENST00000458610 FAM135BQ49AJ0 1406 aa23.34■■□□□ 1.33
CD28-203ENST00000458610 PRAG1Q86YV5 1406 aa23.34■■□□□ 1.33
CD28-203ENST00000458610 ABCC11Q96J66 1382 aa23.34■■□□□ 1.33
CD28-203ENST00000458610 SIRT1Q96EB6 747 aa23.33■■□□□ 1.33
CD28-203ENST00000458610 ROBO2Q9HCK4 1378 aa23.32■■□□□ 1.32
CD28-203ENST00000458610 HSPA1LP34931 641 aa23.32■■□□□ 1.32
CD28-203ENST00000458610 NEUROD1Q13562 356 aa23.32■■□□□ 1.32
CD28-203ENST00000458610 SETD1AO15047 1707 aaKnown RBP23.31■■□□□ 1.32
CD28-203ENST00000458610 SIN3AQ96ST3 1273 aa23.31■■□□□ 1.32
CD28-203ENST00000458610 DCCP43146 1447 aa23.31■■□□□ 1.32
CD28-203ENST00000458610 PCGF6Q9BYE7 350 aa23.3■■□□□ 1.32
CD28-203ENST00000458610 YTHDC2Q9H6S0 1430 aaKnown RBP23.29■■□□□ 1.32
CD28-203ENST00000458610 LAMC1P11047 1609 aa23.29■■□□□ 1.32
CD28-203ENST00000458610 TECPR2O15040 1411 aa23.28■■□□□ 1.32
CD28-203ENST00000458610 ADGRL3Q9HAR2 1447 aa23.28■■□□□ 1.32
CD28-203ENST00000458610 L3MBTL2Q969R5 705 aa23.25■■□□□ 1.31
CD28-203ENST00000458610 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.25■■□□□ 1.31
CD28-203ENST00000458610 WAPLQ7Z5K2 1190 aa23.24■■□□□ 1.31
CD28-203ENST00000458610 POGKQ9P215 609 aa23.23■■□□□ 1.31
CD28-203ENST00000458610 ASXL1Q8IXJ9 1541 aa23.21■■□□□ 1.31
CD28-203ENST00000458610 PRAM1Q96QH2 718 aa23.19■■□□□ 1.3
CD28-203ENST00000458610 TRAK1Q9UPV9 953 aa23.19■■□□□ 1.3
CD28-203ENST00000458610 MST1RQ04912 1400 aa23.16■■□□□ 1.3
CD28-203ENST00000458610 KNDC1Q76NI1 1749 aa23.16■■□□□ 1.3
CD28-203ENST00000458610 ROBO1Q9Y6N7 1651 aa23.16■■□□□ 1.3
CD28-203ENST00000458610 ADGRB1O14514 1584 aa23.16■■□□□ 1.3
CD28-203ENST00000458610 BRINP3Q76B58 766 aa23.16■■□□□ 1.3
CD28-203ENST00000458610 TONSLQ96HA7 1378 aa23.15■■□□□ 1.3
CD28-203ENST00000458610 DLC1Q96QB1 1528 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms