RNA–Protein interactions for RNA: ENST00000458114.5

SEMA4F-208, Transcript of ssemaphorin 4F, humanhuman

TSL 4

Gene SEMA4F, Length 577 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-208ENST00000458114 STRCP1A6NGW2 1772 aa29.42■■■□□ 2.3
SEMA4F-208ENST00000458114 TRPM2O94759 1503 aa29.42■■■□□ 2.3
SEMA4F-208ENST00000458114 SLC26A8Q96RN1 970 aa29.41■■■□□ 2.3
SEMA4F-208ENST00000458114 RAB3GAP2Q9H2M9 1393 aa29.39■■■□□ 2.29
SEMA4F-208ENST00000458114 CPS1P31327 1500 aa29.38■■■□□ 2.29
SEMA4F-208ENST00000458114 IQSEC2Q5JU85 1478 aa29.36■■■□□ 2.29
SEMA4F-208ENST00000458114 PPP1R15AO75807 674 aaPredicted RBP29.36■■■□□ 2.29
SEMA4F-208ENST00000458114 BCANQ96GW7 911 aa29.36■■■□□ 2.29
SEMA4F-208ENST00000458114 MPHOSPH9Q99550 1183 aa29.35■■■□□ 2.29
SEMA4F-208ENST00000458114 PLEKHG1Q9ULL1 1385 aa29.33■■■□□ 2.29
SEMA4F-208ENST00000458114 LRRC7Q96NW7 1537 aa29.3■■■□□ 2.28
SEMA4F-208ENST00000458114 ZNF326Q5BKZ1 582 aaKnown RBP29.3■■■□□ 2.28
SEMA4F-208ENST00000458114 UBAP1LF5GYI3 381 aa29.28■■■□□ 2.28
SEMA4F-208ENST00000458114 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.28■■■□□ 2.28
SEMA4F-208ENST00000458114 HDGFP51858 240 aaKnown RBP29.27■■■□□ 2.28
SEMA4F-208ENST00000458114 ADAMTS13Q76LX8 1427 aa29.25■■■□□ 2.27
SEMA4F-208ENST00000458114 NEXMIFQ5QGS0 1516 aa29.23■■■□□ 2.27
SEMA4F-208ENST00000458114 RBM33Q96EV2 1170 aaKnown RBP29.22■■■□□ 2.27
SEMA4F-208ENST00000458114 KIF1BO60333 1816 aa29.22■■■□□ 2.27
SEMA4F-208ENST00000458114 KCNA6P17658 529 aa29.21■■■□□ 2.27
SEMA4F-208ENST00000458114 NRXN3Q9Y4C0 1643 aa29.18■■■□□ 2.26
SEMA4F-208ENST00000458114 NWD1Q149M9 1564 aa29.18■■■□□ 2.26
SEMA4F-208ENST00000458114 ALKQ9UM73 1620 aa29.17■■■□□ 2.26
SEMA4F-208ENST00000458114 TBX22Q9Y458 520 aa29.17■■■□□ 2.26
SEMA4F-208ENST00000458114 CCDC144AA2RUR9 1427 aa29.17■■■□□ 2.26
SEMA4F-208ENST00000458114 XIRP1Q702N8 1843 aaKnown RBP29.15■■■□□ 2.26
SEMA4F-208ENST00000458114 TMEM94Q12767 1356 aa29.14■■■□□ 2.26
SEMA4F-208ENST00000458114 PIP4K2BP78356 416 aa29.14■■■□□ 2.26
SEMA4F-208ENST00000458114 SETBP1Q9Y6X0 1596 aa29.13■■■□□ 2.25
SEMA4F-208ENST00000458114 PROSER2Q86WR7 435 aaPredicted RBP29.12■■■□□ 2.25
SEMA4F-208ENST00000458114 DIP2AQ14689 1571 aa29.12■■■□□ 2.25
SEMA4F-208ENST00000458114 SCAF1Q9H7N4 1312 aaKnown RBP29.12■■■□□ 2.25
SEMA4F-208ENST00000458114 ACIN1Q9UKV3 1341 aaKnown RBP29.11■■■□□ 2.25
SEMA4F-208ENST00000458114 SPATA31E1Q6ZUB1 1445 aa29.11■■■□□ 2.25
SEMA4F-208ENST00000458114 PTPRUQ92729 1446 aa29.11■■■□□ 2.25
SEMA4F-208ENST00000458114 RGL3Q3MIN7 710 aa29.1■■■□□ 2.25
SEMA4F-208ENST00000458114 CHD2O14647 1828 aaKnown RBP29.1■■■□□ 2.25
SEMA4F-208ENST00000458114 NKTRP30414 1462 aaKnown RBP29.1■■■□□ 2.25
SEMA4F-208ENST00000458114 TOM1O60784 492 aa29.08■■■□□ 2.25
SEMA4F-208ENST00000458114 METP08581 1390 aa29.08■■■□□ 2.25
SEMA4F-208ENST00000458114 HRCP23327 699 aa29.05■■■□□ 2.24
SEMA4F-208ENST00000458114 PPLO60437 1756 aa29.05■■■□□ 2.24
SEMA4F-208ENST00000458114 RPGRIP1LQ68CZ1 1315 aa29.04■■■□□ 2.24
SEMA4F-208ENST00000458114 AMOTL2Q9Y2J4 779 aa29.03■■■□□ 2.24
SEMA4F-208ENST00000458114 PIK3R4Q99570 1358 aa29.02■■■□□ 2.24
SEMA4F-208ENST00000458114 ANKRD30BQ9BXX2 1392 aa29.01■■■□□ 2.24
SEMA4F-208ENST00000458114 ADGRF5Q8IZF2 1346 aa29.01■■■□□ 2.23
SEMA4F-208ENST00000458114 VGFO15240 615 aaPredicted RBP29.01■■■□□ 2.23
SEMA4F-208ENST00000458114 XRN1Q8IZH2 1706 aaKnown RBP28.97■■■□□ 2.23
SEMA4F-208ENST00000458114 HSPA1LP34931 641 aa28.96■■■□□ 2.23
SEMA4F-208ENST00000458114 SETD1AO15047 1707 aaKnown RBP28.96■■■□□ 2.23
SEMA4F-208ENST00000458114 IFT172Q9UG01 1749 aa28.96■■■□□ 2.23
SEMA4F-208ENST00000458114 MSH6P52701 1360 aa28.92■■■□□ 2.22
SEMA4F-208ENST00000458114 C14orf37Q86TY3 774 aa28.91■■■□□ 2.22
SEMA4F-208ENST00000458114 PIK3C2GO75747 1445 aa28.86■■■□□ 2.21
SEMA4F-208ENST00000458114 ROBO2Q9HCK4 1378 aa28.84■■■□□ 2.21
SEMA4F-208ENST00000458114 NCOA3Q9Y6Q9 1424 aa28.84■■■□□ 2.21
SEMA4F-208ENST00000458114 ASXL1Q8IXJ9 1541 aa28.84■■■□□ 2.21
SEMA4F-208ENST00000458114 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.83■■■□□ 2.21
SEMA4F-208ENST00000458114 TMEM132EQ6IEE7 984 aa28.82■■■□□ 2.2
SEMA4F-208ENST00000458114 MYOM2P54296 1465 aa28.8■■■□□ 2.2
SEMA4F-208ENST00000458114 NRXN1Q9ULB1 1477 aa28.8■■■□□ 2.2
SEMA4F-208ENST00000458114 C19orf44Q9H6X5 657 aa28.8■■■□□ 2.2
SEMA4F-208ENST00000458114 SLAIN2Q9P270 581 aa28.8■■■□□ 2.2
SEMA4F-208ENST00000458114 ROBO1Q9Y6N7 1651 aa28.8■■■□□ 2.2
SEMA4F-208ENST00000458114 FAM135BQ49AJ0 1406 aa28.79■■■□□ 2.2
SEMA4F-208ENST00000458114 STK26Q9P289 416 aa28.78■■■□□ 2.2
SEMA4F-208ENST00000458114 PTCH1Q13635 1447 aa28.77■■■□□ 2.2
SEMA4F-208ENST00000458114 TRIM26Q12899 539 aaPredicted RBP28.77■■■□□ 2.2
SEMA4F-208ENST00000458114 CFAP70Q5T0N1 1121 aa28.77■■■□□ 2.2
SEMA4F-208ENST00000458114 KDM2AQ9Y2K7 1162 aa28.77■■■□□ 2.2
SEMA4F-208ENST00000458114 DHX57Q6P158 1386 aaKnown RBP28.76■■■□□ 2.2
SEMA4F-208ENST00000458114 ATF3P18847 181 aa28.76■■■□□ 2.19
SEMA4F-208ENST00000458114 NALCNQ8IZF0 1738 aa28.76■■■□□ 2.19
SEMA4F-208ENST00000458114 DCAF11Q8TEB1 546 aa28.75■■■□□ 2.19
SEMA4F-208ENST00000458114 ADGRL3Q9HAR2 1447 aa28.75■■■□□ 2.19
SEMA4F-208ENST00000458114 PRAG1Q86YV5 1406 aa28.74■■■□□ 2.19
SEMA4F-208ENST00000458114 CADPS2Q86UW7 1296 aa28.73■■■□□ 2.19
SEMA4F-208ENST00000458114 C14orf93Q9H972 538 aaKnown RBP28.73■■■□□ 2.19
SEMA4F-208ENST00000458114 LRPPRCP42704 1394 aaKnown RBP28.71■■■□□ 2.19
SEMA4F-208ENST00000458114 WAPLQ7Z5K2 1190 aa28.69■■■□□ 2.18
SEMA4F-208ENST00000458114 PLEKHH1Q9ULM0 1364 aa28.69■■■□□ 2.18
SEMA4F-208ENST00000458114 DCCP43146 1447 aa28.69■■■□□ 2.18
SEMA4F-208ENST00000458114 YTHDC2Q9H6S0 1430 aaKnown RBP28.69■■■□□ 2.18
SEMA4F-208ENST00000458114 MST1RQ04912 1400 aa28.68■■■□□ 2.18
SEMA4F-208ENST00000458114 TECPR2O15040 1411 aa28.67■■■□□ 2.18
SEMA4F-208ENST00000458114 SIN3AQ96ST3 1273 aa28.66■■■□□ 2.18
SEMA4F-208ENST00000458114 ABCC11Q96J66 1382 aa28.65■■■□□ 2.18
SEMA4F-208ENST00000458114 DISP3Q9P2K9 1392 aa28.65■■■□□ 2.18
SEMA4F-208ENST00000458114 LAMC1P11047 1609 aa28.64■■■□□ 2.18
SEMA4F-208ENST00000458114 BRINP3Q76B58 766 aa28.63■■■□□ 2.17
SEMA4F-208ENST00000458114 KNDC1Q76NI1 1749 aa28.62■■■□□ 2.17
SEMA4F-208ENST00000458114 ADGRB1O14514 1584 aa28.62■■■□□ 2.17
SEMA4F-208ENST00000458114 PHLPP1O60346 1717 aa28.6■■■□□ 2.17
SEMA4F-208ENST00000458114 MED1Q15648 1581 aaPredicted RBP28.59■■■□□ 2.17
SEMA4F-208ENST00000458114 NEUROD1Q13562 356 aa28.57■■■□□ 2.16
SEMA4F-208ENST00000458114 DDX17Q92841 729 aaKnown RBP28.57■■■□□ 2.16
SEMA4F-208ENST00000458114 C1orf167Q5SNV9 1468 aa28.57■■■□□ 2.16
SEMA4F-208ENST00000458114 COL16A1Q07092 1604 aaPredicted RBP28.55■■■□□ 2.16
SEMA4F-208ENST00000458114 SAFB2Q14151 953 aaKnown RBP eCLIP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms