RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 FBXO41Q8TF61 875 aa18.09■□□□□ 0.49
C9orf139-201ENST00000457302 IQGAP1P46940 1657 aa18.09■□□□□ 0.49
C9orf139-201ENST00000457302 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
C9orf139-201ENST00000457302 RIMS2Q9UQ26 1411 aa18.08■□□□□ 0.49
C9orf139-201ENST00000457302 ZNF335Q9H4Z2 1342 aaPredicted RBP18.08■□□□□ 0.49
C9orf139-201ENST00000457302 NUTM2DQ5VT03 806 aaPredicted RBP18.07■□□□□ 0.48
C9orf139-201ENST00000457302 NEURL4Q96JN8 1562 aa18.07■□□□□ 0.48
C9orf139-201ENST00000457302 TRPM2O94759 1503 aa18.07■□□□□ 0.48
C9orf139-201ENST00000457302 CCDC144AA2RUR9 1427 aa18.06■□□□□ 0.48
C9orf139-201ENST00000457302 SLC26A8Q96RN1 970 aa18.05■□□□□ 0.48
C9orf139-201ENST00000457302 SENP3Q9H4L4 574 aaPredicted RBP18.05■□□□□ 0.48
C9orf139-201ENST00000457302 RPGRIP1LQ68CZ1 1315 aa18.03■□□□□ 0.48
C9orf139-201ENST00000457302 VGFO15240 615 aaPredicted RBP18.02■□□□□ 0.48
C9orf139-201ENST00000457302 CLTCL1P53675 1640 aa18.01■□□□□ 0.47
C9orf139-201ENST00000457302 RGL3Q3MIN7 710 aa18.01■□□□□ 0.47
C9orf139-201ENST00000457302 PLEKHG1Q9ULL1 1385 aa18.01■□□□□ 0.47
C9orf139-201ENST00000457302 ZFYVE9O95405 1425 aa18■□□□□ 0.47
C9orf139-201ENST00000457302 TBX22Q9Y458 520 aa18■□□□□ 0.47
C9orf139-201ENST00000457302 KCNA6P17658 529 aa17.98■□□□□ 0.47
C9orf139-201ENST00000457302 LTBP4Q8N2S1 1624 aa17.98■□□□□ 0.47
C9orf139-201ENST00000457302 CPS1P31327 1500 aa17.98■□□□□ 0.47
C9orf139-201ENST00000457302 PROSER2Q86WR7 435 aaPredicted RBP17.94■□□□□ 0.46
C9orf139-201ENST00000457302 IQSEC2Q5JU85 1478 aa17.94■□□□□ 0.46
C9orf139-201ENST00000457302 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
C9orf139-201ENST00000457302 TOM1O60784 492 aa17.92■□□□□ 0.46
C9orf139-201ENST00000457302 ANKRD30BQ9BXX2 1392 aa17.91■□□□□ 0.46
C9orf139-201ENST00000457302 PIK3R4Q99570 1358 aa17.9■□□□□ 0.46
C9orf139-201ENST00000457302 NEXMIFQ5QGS0 1516 aa17.89■□□□□ 0.45
C9orf139-201ENST00000457302 AMOTL2Q9Y2J4 779 aa17.88■□□□□ 0.45
C9orf139-201ENST00000457302 DIP2AQ14689 1571 aa17.87■□□□□ 0.45
C9orf139-201ENST00000457302 CHD2O14647 1828 aaKnown RBP17.87■□□□□ 0.45
C9orf139-201ENST00000457302 C14orf37Q86TY3 774 aa17.87■□□□□ 0.45
C9orf139-201ENST00000457302 SPATA31E1Q6ZUB1 1445 aa17.87■□□□□ 0.45
C9orf139-201ENST00000457302 ADAMTS13Q76LX8 1427 aa17.87■□□□□ 0.45
C9orf139-201ENST00000457302 STRCP1A6NGW2 1772 aa17.86■□□□□ 0.45
C9orf139-201ENST00000457302 PPLO60437 1756 aa17.86■□□□□ 0.45
C9orf139-201ENST00000457302 STAC3Q96MF2 364 aa17.86■□□□□ 0.45
C9orf139-201ENST00000457302 SCAF1Q9H7N4 1312 aaKnown RBP17.86■□□□□ 0.45
C9orf139-201ENST00000457302 LRRC7Q96NW7 1537 aa17.85■□□□□ 0.45
C9orf139-201ENST00000457302 KDM2AQ9Y2K7 1162 aa17.85■□□□□ 0.45
C9orf139-201ENST00000457302 DCAF11Q8TEB1 546 aa17.84■□□□□ 0.45
C9orf139-201ENST00000457302 SETBP1Q9Y6X0 1596 aa17.83■□□□□ 0.45
C9orf139-201ENST00000457302 ADGRF5Q8IZF2 1346 aa17.83■□□□□ 0.44
C9orf139-201ENST00000457302 PCGF6Q9BYE7 350 aa17.83■□□□□ 0.44
C9orf139-201ENST00000457302 TMEM94Q12767 1356 aa17.82■□□□□ 0.44
C9orf139-201ENST00000457302 PIP4K2BP78356 416 aa17.82■□□□□ 0.44
C9orf139-201ENST00000457302 RBM33Q96EV2 1170 aaKnown RBP17.81■□□□□ 0.44
C9orf139-201ENST00000457302 NKTRP30414 1462 aaKnown RBP17.81■□□□□ 0.44
C9orf139-201ENST00000457302 METP08581 1390 aa17.79■□□□□ 0.44
C9orf139-201ENST00000457302 MSH6P52701 1360 aa17.79■□□□□ 0.44
C9orf139-201ENST00000457302 NEUROD1Q13562 356 aa17.79■□□□□ 0.44
C9orf139-201ENST00000457302 ALKQ9UM73 1620 aa17.78■□□□□ 0.44
C9orf139-201ENST00000457302 NRXN3Q9Y4C0 1643 aa17.78■□□□□ 0.44
C9orf139-201ENST00000457302 NWD1Q149M9 1564 aa17.78■□□□□ 0.44
C9orf139-201ENST00000457302 ATF3P18847 181 aa17.77■□□□□ 0.44
C9orf139-201ENST00000457302 C19orf44Q9H6X5 657 aa17.77■□□□□ 0.44
C9orf139-201ENST00000457302 C14orf93Q9H972 538 aaKnown RBP17.77■□□□□ 0.44
C9orf139-201ENST00000457302 NCOA3Q9Y6Q9 1424 aa17.77■□□□□ 0.44
C9orf139-201ENST00000457302 IFT172Q9UG01 1749 aa17.77■□□□□ 0.44
C9orf139-201ENST00000457302 STK26Q9P289 416 aa17.76■□□□□ 0.43
C9orf139-201ENST00000457302 SIN3AQ96ST3 1273 aa17.75■□□□□ 0.43
C9orf139-201ENST00000457302 DHX57Q6P158 1386 aaKnown RBP17.75■□□□□ 0.43
C9orf139-201ENST00000457302 XIRP1Q702N8 1843 aaKnown RBP17.75■□□□□ 0.43
C9orf139-201ENST00000457302 PTPRUQ92729 1446 aa17.74■□□□□ 0.43
C9orf139-201ENST00000457302 CFAP70Q5T0N1 1121 aa17.74■□□□□ 0.43
C9orf139-201ENST00000457302 TMEM132EQ6IEE7 984 aa17.74■□□□□ 0.43
C9orf139-201ENST00000457302 CADPS2Q86UW7 1296 aa17.74■□□□□ 0.43
C9orf139-201ENST00000457302 MYOM2P54296 1465 aa17.73■□□□□ 0.43
C9orf139-201ENST00000457302 PIK3C2GO75747 1445 aa17.72■□□□□ 0.43
C9orf139-201ENST00000457302 SLAIN2Q9P270 581 aa17.71■□□□□ 0.43
C9orf139-201ENST00000457302 L3MBTL2Q969R5 705 aa17.68■□□□□ 0.42
C9orf139-201ENST00000457302 NRXN1Q9ULB1 1477 aa17.68■□□□□ 0.42
C9orf139-201ENST00000457302 LRPPRCP42704 1394 aaKnown RBP17.67■□□□□ 0.42
C9orf139-201ENST00000457302 SETD1AO15047 1707 aaKnown RBP17.67■□□□□ 0.42
C9orf139-201ENST00000457302 XRN1Q8IZH2 1706 aaKnown RBP17.67■□□□□ 0.42
C9orf139-201ENST00000457302 SIRT1Q96EB6 747 aa17.67■□□□□ 0.42
C9orf139-201ENST00000457302 LAMC1P11047 1609 aa17.67■□□□□ 0.42
C9orf139-201ENST00000457302 ABCC11Q96J66 1382 aa17.66■□□□□ 0.42
C9orf139-201ENST00000457302 POGKQ9P215 609 aa17.66■□□□□ 0.42
C9orf139-201ENST00000457302 PTCH1Q13635 1447 aa17.65■□□□□ 0.42
C9orf139-201ENST00000457302 YTHDC2Q9H6S0 1430 aaKnown RBP17.65■□□□□ 0.42
C9orf139-201ENST00000457302 ILDR2Q71H61 639 aa17.65■□□□□ 0.42
C9orf139-201ENST00000457302 WAPLQ7Z5K2 1190 aa17.65■□□□□ 0.42
C9orf139-201ENST00000457302 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
C9orf139-201ENST00000457302 ROBO2Q9HCK4 1378 aa17.64■□□□□ 0.41
C9orf139-201ENST00000457302 HSPA1LP34931 641 aa17.63■□□□□ 0.41
C9orf139-201ENST00000457302 TRAK1Q9UPV9 953 aa17.63■□□□□ 0.41
C9orf139-201ENST00000457302 TONSLQ96HA7 1378 aa17.63■□□□□ 0.41
C9orf139-201ENST00000457302 FAM135BQ49AJ0 1406 aa17.63■□□□□ 0.41
C9orf139-201ENST00000457302 DISP3Q9P2K9 1392 aa17.61■□□□□ 0.41
C9orf139-201ENST00000457302 ADGRL3Q9HAR2 1447 aa17.61■□□□□ 0.41
C9orf139-201ENST00000457302 PRAM1Q96QH2 718 aa17.6■□□□□ 0.41
C9orf139-201ENST00000457302 DCCP43146 1447 aa17.6■□□□□ 0.41
C9orf139-201ENST00000457302 TECPR2O15040 1411 aa17.59■□□□□ 0.41
C9orf139-201ENST00000457302 PRAG1Q86YV5 1406 aa17.59■□□□□ 0.41
C9orf139-201ENST00000457302 SAFB2Q14151 953 aaKnown RBP eCLIP17.59■□□□□ 0.41
C9orf139-201ENST00000457302 CCER1Q8TC90 406 aaPredicted RBP17.59■□□□□ 0.41
C9orf139-201ENST00000457302 KNDC1Q76NI1 1749 aa17.58■□□□□ 0.4
C9orf139-201ENST00000457302 CLSPNQ9HAW4 1339 aa17.56■□□□□ 0.4
C9orf139-201ENST00000457302 ROBO1Q9Y6N7 1651 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms