RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
SCN5A-210ENST00000455624 MYBBP1AQ9BQG0 1328 aaKnown RBP12.4□□□□□ -0.42
SCN5A-210ENST00000455624 PDE3BQ13370 1112 aa12.4□□□□□ -0.42
SCN5A-210ENST00000455624 TDRD9Q8NDG6 1382 aaKnown RBP12.4□□□□□ -0.42
SCN5A-210ENST00000455624 BECN2A8MW95 431 aa12.39□□□□□ -0.43
SCN5A-210ENST00000455624 IFIT2P09913 472 aaKnown RBP12.39□□□□□ -0.43
SCN5A-210ENST00000455624 CCDC144AA2RUR9 1427 aa12.39□□□□□ -0.43
SCN5A-210ENST00000455624 IPO9Q96P70 1041 aaKnown RBP12.39□□□□□ -0.43
SCN5A-210ENST00000455624 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
SCN5A-210ENST00000455624 HOOK1Q9UJC3 728 aaKnown RBP12.39□□□□□ -0.43
SCN5A-210ENST00000455624 NLRP13Q86W25 1043 aa12.38□□□□□ -0.43
SCN5A-210ENST00000455624 ANKRD20A12PQ8NF67 263 aa12.38□□□□□ -0.43
SCN5A-210ENST00000455624 ELL2O00472 640 aaPredicted RBP12.38□□□□□ -0.43
SCN5A-210ENST00000455624 PSME1Q06323 249 aa12.38□□□□□ -0.43
SCN5A-210ENST00000455624 FOXD4L6Q3SYB3 417 aaPredicted RBP12.38□□□□□ -0.43
SCN5A-210ENST00000455624 FOXD4L3Q6VB84 417 aaPredicted RBP12.38□□□□□ -0.43
SCN5A-210ENST00000455624 PHF23Q9BUL5 403 aaPredicted RBP12.38□□□□□ -0.43
SCN5A-210ENST00000455624 CPLX2Q6PUV4 134 aaKnown RBP12.38□□□□□ -0.43
SCN5A-210ENST00000455624 NECTIN2Q92692 538 aa12.38□□□□□ -0.43
SCN5A-210ENST00000455624 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCN5A-210ENST00000455624 DDX58O95786 925 aaKnown RBP12.37□□□□□ -0.43
SCN5A-210ENST00000455624 FHOD3Q2V2M9 1422 aa12.37□□□□□ -0.43
SCN5A-210ENST00000455624 GPS2Q13227 327 aa12.37□□□□□ -0.43
SCN5A-210ENST00000455624 SAMD1Q6SPF0 538 aaPredicted RBP12.37□□□□□ -0.43
SCN5A-210ENST00000455624 PANK3Q9H999 370 aa12.37□□□□□ -0.43
SCN5A-210ENST00000455624 ZKSCAN2Q63HK3 967 aa12.37□□□□□ -0.43
SCN5A-210ENST00000455624 ROCK1Q13464 1354 aa12.36□□□□□ -0.43
SCN5A-210ENST00000455624 RAPGEF2Q9Y4G8 1499 aa12.36□□□□□ -0.43
SCN5A-210ENST00000455624 MINK1Q8N4C8 1332 aaPredicted RBP12.36□□□□□ -0.43
SCN5A-210ENST00000455624 CENPQQ7L2Z9 268 aaPredicted RBP12.36□□□□□ -0.43
SCN5A-210ENST00000455624 TRDNQ13061 729 aa12.35□□□□□ -0.43
SCN5A-210ENST00000455624 CPLX1O14810 134 aa12.35□□□□□ -0.43
SCN5A-210ENST00000455624 SKOR2Q2VWA4 1001 aaPredicted RBP12.35□□□□□ -0.43
SCN5A-210ENST00000455624 VGFO15240 615 aaPredicted RBP12.35□□□□□ -0.43
SCN5A-210ENST00000455624 E9PSI1 815 aa12.34□□□□□ -0.43
SCN5A-210ENST00000455624 L3MBTL2Q969R5 705 aa12.34□□□□□ -0.43
SCN5A-210ENST00000455624 FYB1O15117 783 aa12.34□□□□□ -0.43
SCN5A-210ENST00000455624 G3BP1Q13283 466 aaKnown RBP eCLIP12.34□□□□□ -0.43
SCN5A-210ENST00000455624 ZNF592Q92610 1267 aa12.34□□□□□ -0.43
SCN5A-210ENST00000455624 BCL2L13Q9BXK5 485 aa12.34□□□□□ -0.43
SCN5A-210ENST00000455624 ZKSCAN1P17029 563 aaPredicted RBP12.34□□□□□ -0.43
SCN5A-210ENST00000455624 IPO7O95373 1038 aaKnown RBP12.33□□□□□ -0.43
SCN5A-210ENST00000455624 FOSBP53539 338 aa12.33□□□□□ -0.43
SCN5A-210ENST00000455624 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
SCN5A-210ENST00000455624 DDX49Q9Y6V7 483 aaKnown RBP12.33□□□□□ -0.44
SCN5A-210ENST00000455624 CCDC27Q2M243 656 aa12.32□□□□□ -0.44
SCN5A-210ENST00000455624 RNF20Q5VTR2 975 aa12.32□□□□□ -0.44
SCN5A-210ENST00000455624 DIAPH1O60610 1272 aaKnown RBP12.32□□□□□ -0.44
SCN5A-210ENST00000455624 NAP1L1P55209 391 aaKnown RBP12.31□□□□□ -0.44
SCN5A-210ENST00000455624 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
SCN5A-210ENST00000455624 ODF2Q5BJF6 829 aa12.31□□□□□ -0.44
SCN5A-210ENST00000455624 CT47A1Q5JQC4 288 aaPredicted RBP12.31□□□□□ -0.44
SCN5A-210ENST00000455624 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.31□□□□□ -0.44
SCN5A-210ENST00000455624 ATF3P18847 181 aa12.31□□□□□ -0.44
SCN5A-210ENST00000455624 BICD2Q8TD16 824 aa12.31□□□□□ -0.44
SCN5A-210ENST00000455624 PRDM2Q13029 1718 aa12.3□□□□□ -0.44
SCN5A-210ENST00000455624 BRMS1Q9HCU9 246 aa12.3□□□□□ -0.44
SCN5A-210ENST00000455624 EPS15P42566 896 aa12.3□□□□□ -0.44
SCN5A-210ENST00000455624 CRBNQ96SW2 442 aa12.3□□□□□ -0.44
SCN5A-210ENST00000455624 REC8O95072 547 aa12.3□□□□□ -0.44
SCN5A-210ENST00000455624 RIC3Q7Z5B4 369 aa12.29□□□□□ -0.44
SCN5A-210ENST00000455624 SAFBQ15424 915 aaKnown RBP eCLIP12.29□□□□□ -0.44
SCN5A-210ENST00000455624 PLIN1O60240 522 aa12.28□□□□□ -0.44
SCN5A-210ENST00000455624 TMEM132AQ24JP5 1023 aa12.28□□□□□ -0.44
SCN5A-210ENST00000455624 R3HCC1Q9Y3T6 440 aaKnown RBP12.28□□□□□ -0.44
SCN5A-210ENST00000455624 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
SCN5A-210ENST00000455624 TOP2AP11388 1531 aaKnown RBP12.28□□□□□ -0.44
SCN5A-210ENST00000455624 RIPK4P57078 832 aa12.28□□□□□ -0.44
SCN5A-210ENST00000455624 WWC2Q6AWC2 1192 aa12.28□□□□□ -0.44
SCN5A-210ENST00000455624 TSPYL4Q9UJ04 414 aa12.28□□□□□ -0.44
SCN5A-210ENST00000455624 DDX19BQ9UMR2 479 aa12.28□□□□□ -0.44
SCN5A-210ENST00000455624 AK7Q96M32 723 aa12.28□□□□□ -0.44
SCN5A-210ENST00000455624 API5Q9BZZ5 524 aaKnown RBP12.28□□□□□ -0.44
SCN5A-210ENST00000455624 HSP90AB2PQ58FF8 381 aa12.28□□□□□ -0.44
SCN5A-210ENST00000455624 NINLQ9Y2I6 1382 aa12.27□□□□□ -0.44
SCN5A-210ENST00000455624 ERC2O15083 957 aa12.27□□□□□ -0.44
SCN5A-210ENST00000455624 FKBP5Q13451 457 aaPredicted RBP12.27□□□□□ -0.44
SCN5A-210ENST00000455624 HOMER1Q86YM7 354 aa12.27□□□□□ -0.44
SCN5A-210ENST00000455624 SASS6Q6UVJ0 657 aa12.27□□□□□ -0.45
SCN5A-210ENST00000455624 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.45
SCN5A-210ENST00000455624 RUFY1Q96T51 708 aa12.27□□□□□ -0.45
SCN5A-210ENST00000455624 RRP1P56182 461 aaKnown RBP12.27□□□□□ -0.45
SCN5A-210ENST00000455624 IKQ13123 557 aaPredicted RBP12.26□□□□□ -0.45
SCN5A-210ENST00000455624 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
SCN5A-210ENST00000455624 ST20-MTHFSA0A0A6YYL1 179 aa12.26□□□□□ -0.45
SCN5A-210ENST00000455624 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
SCN5A-210ENST00000455624 NEUROD6Q96NK8 337 aa12.26□□□□□ -0.45
SCN5A-210ENST00000455624 ZNF771Q7L3S4 317 aaPredicted RBP12.26□□□□□ -0.45
SCN5A-210ENST00000455624 COG6Q9Y2V7 657 aa12.26□□□□□ -0.45
SCN5A-210ENST00000455624 SMC3Q9UQE7 1217 aa12.26□□□□□ -0.45
SCN5A-210ENST00000455624 HSP90AB4PQ58FF6 505 aa12.26□□□□□ -0.45
SCN5A-210ENST00000455624 MTMR7Q9Y216 660 aa12.26□□□□□ -0.45
SCN5A-210ENST00000455624 MROH2BQ7Z745 1585 aa12.25□□□□□ -0.45
SCN5A-210ENST00000455624 AIMP1Q12904 312 aaKnown RBP12.25□□□□□ -0.45
SCN5A-210ENST00000455624 INTS3Q68E01 1043 aaKnown RBP12.25□□□□□ -0.45
SCN5A-210ENST00000455624 KIF6Q6ZMV9 814 aa12.25□□□□□ -0.45
SCN5A-210ENST00000455624 JPH4Q96JJ6 628 aa12.25□□□□□ -0.45
SCN5A-210ENST00000455624 TEX35Q5T0J7 233 aa12.25□□□□□ -0.45
SCN5A-210ENST00000455624 OLFM4Q6UX06 510 aa12.25□□□□□ -0.45
SCN5A-210ENST00000455624 KDM4AO75164 1064 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms