RNA–Protein interactions for RNA: ENST00000454225.1

CITED1-210, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1, humanhuman

TSL 5

Gene CITED1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1-210ENST00000454225 SLC26A8Q96RN1 970 aa38.77■■■■□ 3.8
CITED1-210ENST00000454225 SENP3Q9H4L4 574 aaPredicted RBP38.77■■■■□ 3.8
CITED1-210ENST00000454225 HDGFP51858 240 aaKnown RBP38.76■■■■□ 3.8
CITED1-210ENST00000454225 LRRC7Q96NW7 1537 aa38.74■■■■□ 3.79
CITED1-210ENST00000454225 PLEKHG1Q9ULL1 1385 aa38.72■■■■□ 3.79
CITED1-210ENST00000454225 SLC4A1APQ9BWU0 796 aaKnown RBP38.72■■■■□ 3.79
CITED1-210ENST00000454225 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.71■■■■□ 3.79
CITED1-210ENST00000454225 TRPM2O94759 1503 aa38.7■■■■□ 3.79
CITED1-210ENST00000454225 NUTM2DQ5VT03 806 aaPredicted RBP38.7■■■■□ 3.79
CITED1-210ENST00000454225 CLTCL1P53675 1640 aa38.67■■■■□ 3.78
CITED1-210ENST00000454225 TOM1O60784 492 aa38.64■■■■□ 3.78
CITED1-210ENST00000454225 KCNA6P17658 529 aa38.62■■■■□ 3.77
CITED1-210ENST00000454225 SCAF1Q9H7N4 1312 aaKnown RBP38.61■■■■□ 3.77
CITED1-210ENST00000454225 PIP4K2BP78356 416 aa38.6■■■■□ 3.77
CITED1-210ENST00000454225 ZNF326Q5BKZ1 582 aaKnown RBP38.6■■■■□ 3.77
CITED1-210ENST00000454225 SETD5Q9C0A6 1442 aa38.55■■■■□ 3.76
CITED1-210ENST00000454225 KIF1BO60333 1816 aa38.55■■■■□ 3.76
CITED1-210ENST00000454225 XIRP1Q702N8 1843 aaKnown RBP38.55■■■■□ 3.76
CITED1-210ENST00000454225 FOXD1Q16676 465 aa38.55■■■■□ 3.76
CITED1-210ENST00000454225 NWD1Q149M9 1564 aa38.55■■■■□ 3.76
CITED1-210ENST00000454225 ALKQ9UM73 1620 aa38.54■■■■□ 3.76
CITED1-210ENST00000454225 ADAMTS13Q76LX8 1427 aa38.54■■■■□ 3.76
CITED1-210ENST00000454225 TBX22Q9Y458 520 aa38.53■■■■□ 3.76
CITED1-210ENST00000454225 MPHOSPH9Q99550 1183 aa38.51■■■■□ 3.76
CITED1-210ENST00000454225 TMEM94Q12767 1356 aa38.51■■■■□ 3.76
CITED1-210ENST00000454225 NKTRP30414 1462 aaKnown RBP38.51■■■■□ 3.76
CITED1-210ENST00000454225 PROSER2Q86WR7 435 aaPredicted RBP38.5■■■■□ 3.75
CITED1-210ENST00000454225 DIP2AQ14689 1571 aa38.49■■■■□ 3.75
CITED1-210ENST00000454225 CHD2O14647 1828 aaKnown RBP38.49■■■■□ 3.75
CITED1-210ENST00000454225 RBM33Q96EV2 1170 aaKnown RBP38.47■■■■□ 3.75
CITED1-210ENST00000454225 NEXMIFQ5QGS0 1516 aa38.46■■■■□ 3.75
CITED1-210ENST00000454225 RAB3GAP2Q9H2M9 1393 aa38.44■■■■□ 3.74
CITED1-210ENST00000454225 ACIN1Q9UKV3 1341 aaKnown RBP38.42■■■■□ 3.74
CITED1-210ENST00000454225 NRXN3Q9Y4C0 1643 aa38.41■■■■□ 3.74
CITED1-210ENST00000454225 SETBP1Q9Y6X0 1596 aa38.41■■■■□ 3.74
CITED1-210ENST00000454225 HSPA1LP34931 641 aa38.39■■■■□ 3.74
CITED1-210ENST00000454225 PIK3R4Q99570 1358 aa38.39■■■■□ 3.74
CITED1-210ENST00000454225 CCDC144AA2RUR9 1427 aa38.37■■■■□ 3.73
CITED1-210ENST00000454225 PTPRUQ92729 1446 aa38.31■■■■□ 3.72
CITED1-210ENST00000454225 AMOTL2Q9Y2J4 779 aa38.3■■■■□ 3.72
CITED1-210ENST00000454225 RPGRIP1LQ68CZ1 1315 aa38.3■■■■□ 3.72
CITED1-210ENST00000454225 MSH6P52701 1360 aa38.3■■■■□ 3.72
CITED1-210ENST00000454225 VGFO15240 615 aaPredicted RBP38.28■■■■□ 3.72
CITED1-210ENST00000454225 METP08581 1390 aa38.27■■■■□ 3.72
CITED1-210ENST00000454225 PPLO60437 1756 aa38.26■■■■□ 3.71
CITED1-210ENST00000454225 C14orf37Q86TY3 774 aa38.23■■■■□ 3.71
CITED1-210ENST00000454225 SPATA31E1Q6ZUB1 1445 aa38.22■■■■□ 3.71
CITED1-210ENST00000454225 XRN1Q8IZH2 1706 aaKnown RBP38.22■■■■□ 3.71
CITED1-210ENST00000454225 RGL3Q3MIN7 710 aa38.22■■■■□ 3.71
CITED1-210ENST00000454225 NCOA3Q9Y6Q9 1424 aa38.21■■■■□ 3.71
CITED1-210ENST00000454225 DISP3Q9P2K9 1392 aa38.19■■■■□ 3.7
CITED1-210ENST00000454225 FAM135BQ49AJ0 1406 aa38.16■■■■□ 3.7
CITED1-210ENST00000454225 SETD1AO15047 1707 aaKnown RBP38.13■■■■□ 3.69
CITED1-210ENST00000454225 ROBO1Q9Y6N7 1651 aa38.12■■■■□ 3.69
CITED1-210ENST00000454225 HRCP23327 699 aa38.12■■■■□ 3.69
CITED1-210ENST00000454225 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.1■■■■□ 3.69
CITED1-210ENST00000454225 C19orf44Q9H6X5 657 aa38.1■■■■□ 3.69
CITED1-210ENST00000454225 SLAIN2Q9P270 581 aa38.1■■■■□ 3.69
CITED1-210ENST00000454225 ADGRF5Q8IZF2 1346 aa38.1■■■■□ 3.69
CITED1-210ENST00000454225 IFT172Q9UG01 1749 aa38.09■■■■□ 3.69
CITED1-210ENST00000454225 ANKRD30BQ9BXX2 1392 aa38.08■■■■□ 3.69
CITED1-210ENST00000454225 ATF3P18847 181 aa38.05■■■■□ 3.68
CITED1-210ENST00000454225 CADPS2Q86UW7 1296 aa38.05■■■■□ 3.68
CITED1-210ENST00000454225 MED1Q15648 1581 aaPredicted RBP37.98■■■■□ 3.67
CITED1-210ENST00000454225 PTCH1Q13635 1447 aa37.98■■■■□ 3.67
CITED1-210ENST00000454225 DCCP43146 1447 aa37.96■■■■□ 3.67
CITED1-210ENST00000454225 PIK3C2GO75747 1445 aa37.95■■■■□ 3.67
CITED1-210ENST00000454225 ADGRL3Q9HAR2 1447 aa37.95■■■■□ 3.67
CITED1-210ENST00000454225 ROBO2Q9HCK4 1378 aa37.95■■■■□ 3.67
CITED1-210ENST00000454225 PRAG1Q86YV5 1406 aa37.93■■■■□ 3.66
CITED1-210ENST00000454225 NALCNQ8IZF0 1738 aa37.92■■■■□ 3.66
CITED1-210ENST00000454225 PHLPP1O60346 1717 aa37.89■■■■□ 3.66
CITED1-210ENST00000454225 MYOM2P54296 1465 aa37.89■■■■□ 3.66
CITED1-210ENST00000454225 ASXL1Q8IXJ9 1541 aa37.87■■■■□ 3.65
CITED1-210ENST00000454225 MST1RQ04912 1400 aa37.86■■■■□ 3.65
CITED1-210ENST00000454225 NRXN1Q9ULB1 1477 aa37.85■■■■□ 3.65
CITED1-210ENST00000454225 TMEM132EQ6IEE7 984 aa37.85■■■■□ 3.65
CITED1-210ENST00000454225 STK26Q9P289 416 aa37.85■■■■□ 3.65
CITED1-210ENST00000454225 ILDR2Q71H61 639 aa37.84■■■■□ 3.65
CITED1-210ENST00000454225 LRPPRCP42704 1394 aaKnown RBP37.82■■■■□ 3.65
CITED1-210ENST00000454225 BRINP3Q76B58 766 aa37.82■■■■□ 3.64
CITED1-210ENST00000454225 C14orf93Q9H972 538 aaKnown RBP37.8■■■■□ 3.64
CITED1-210ENST00000454225 TECPR2O15040 1411 aa37.78■■■■□ 3.64
CITED1-210ENST00000454225 CFAP70Q5T0N1 1121 aa37.78■■■■□ 3.64
CITED1-210ENST00000454225 COL16A1Q07092 1604 aaPredicted RBP37.78■■■■□ 3.64
CITED1-210ENST00000454225 AHDC1Q5TGY3 1603 aaPredicted RBP37.77■■■■□ 3.64
CITED1-210ENST00000454225 LAMC1P11047 1609 aa37.76■■■■□ 3.64
CITED1-210ENST00000454225 ABCC11Q96J66 1382 aa37.76■■■■□ 3.64
CITED1-210ENST00000454225 YTHDC2Q9H6S0 1430 aaKnown RBP37.76■■■■□ 3.63
CITED1-210ENST00000454225 KNDC1Q76NI1 1749 aa37.75■■■■□ 3.63
CITED1-210ENST00000454225 PHF23Q9BUL5 403 aaPredicted RBP37.75■■■■□ 3.63
CITED1-210ENST00000454225 DCAF11Q8TEB1 546 aa37.74■■■■□ 3.63
CITED1-210ENST00000454225 KDM2AQ9Y2K7 1162 aa37.74■■■■□ 3.63
CITED1-210ENST00000454225 WAPLQ7Z5K2 1190 aa37.73■■■■□ 3.63
CITED1-210ENST00000454225 JCADQ9P266 1359 aa37.71■■■■□ 3.63
CITED1-210ENST00000454225 C1orf167Q5SNV9 1468 aa37.7■■■■□ 3.63
CITED1-210ENST00000454225 DHX57Q6P158 1386 aaKnown RBP37.68■■■■□ 3.62
CITED1-210ENST00000454225 PLEKHH1Q9ULM0 1364 aa37.68■■■■□ 3.62
CITED1-210ENST00000454225 CDC42BPGQ6DT37 1551 aa37.65■■■■□ 3.62
CITED1-210ENST00000454225 NHSL1Q5SYE7 1610 aa37.65■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms