RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 MAGI1Q96QZ7 1491 aaPredicted RBP25.25■■□□□ 1.63
LMBR1-213ENST00000454132 GPRASP1Q5JY77 1395 aa25.24■■□□□ 1.63
LMBR1-213ENST00000454132 CLUAP1Q96AJ1 413 aa25.23■■□□□ 1.63
LMBR1-213ENST00000454132 ATP10BO94823 1461 aa25.22■■□□□ 1.63
LMBR1-213ENST00000454132 ABCC10Q5T3U5 1492 aa25.21■■□□□ 1.63
LMBR1-213ENST00000454132 BECN1Q14457 450 aa25.19■■□□□ 1.62
LMBR1-213ENST00000454132 PRDM15P57071 1507 aaPredicted RBP25.19■■□□□ 1.62
LMBR1-213ENST00000454132 SHANK2Q9UPX8 1470 aa25.19■■□□□ 1.62
LMBR1-213ENST00000454132 WDR7Q9Y4E6 1490 aa25.19■■□□□ 1.62
LMBR1-213ENST00000454132 EIF4G3O43432 1585 aaKnown RBP25.18■■□□□ 1.62
LMBR1-213ENST00000454132 RSPH6AQ9H0K4 717 aa25.18■■□□□ 1.62
LMBR1-213ENST00000454132 ADCY10Q96PN6 1610 aa25.18■■□□□ 1.62
LMBR1-213ENST00000454132 MRC2Q9UBG0 1479 aa25.17■■□□□ 1.62
LMBR1-213ENST00000454132 TRMT2AQ8IZ69 625 aaKnown RBP25.17■■□□□ 1.62
LMBR1-213ENST00000454132 NKTRP30414 1462 aaKnown RBP25.17■■□□□ 1.62
LMBR1-213ENST00000454132 INSRP06213 1382 aa25.16■■□□□ 1.62
LMBR1-213ENST00000454132 PANK2Q9BZ23 570 aa25.16■■□□□ 1.62
LMBR1-213ENST00000454132 CENPJQ9HC77 1338 aaPredicted RBP25.16■■□□□ 1.62
LMBR1-213ENST00000454132 CARMIL2Q6F5E8 1435 aa25.16■■□□□ 1.62
LMBR1-213ENST00000454132 EIF3AQ14152 1382 aaKnown RBP25.15■■□□□ 1.62
LMBR1-213ENST00000454132 E9PSI1 815 aa25.15■■□□□ 1.62
LMBR1-213ENST00000454132 PCDHB15Q9Y5E8 787 aa25.14■■□□□ 1.62
LMBR1-213ENST00000454132 TBC1D2Q9BYX2 928 aa25.14■■□□□ 1.61
LMBR1-213ENST00000454132 RLBP1P12271 317 aa25.13■■□□□ 1.61
LMBR1-213ENST00000454132 CCDC141Q6ZP82 1450 aa25.11■■□□□ 1.61
LMBR1-213ENST00000454132 IFT140Q96RY7 1462 aa25.1■■□□□ 1.61
LMBR1-213ENST00000454132 PDZRN3Q9UPQ7 1066 aa25.1■■□□□ 1.61
LMBR1-213ENST00000454132 CGNL1Q0VF96 1302 aa25.1■■□□□ 1.61
LMBR1-213ENST00000454132 ANTXR1Q9H6X2 564 aa25.09■■□□□ 1.61
LMBR1-213ENST00000454132 XRCC6P12956 609 aaKnown RBP eCLIP25.09■■□□□ 1.61
LMBR1-213ENST00000454132 WWC1Q8IX03 1113 aa25.09■■□□□ 1.61
LMBR1-213ENST00000454132 NAP1L5Q96NT1 182 aaPredicted RBP25.08■■□□□ 1.6
LMBR1-213ENST00000454132 UPF2Q9HAU5 1272 aaKnown RBP25.08■■□□□ 1.6
LMBR1-213ENST00000454132 MYO5CQ9NQX4 1742 aa25.07■■□□□ 1.6
LMBR1-213ENST00000454132 MAPK8IP3Q9UPT6 1336 aa25.07■■□□□ 1.6
LMBR1-213ENST00000454132 CARD14Q9BXL6 1004 aa25.06■■□□□ 1.6
LMBR1-213ENST00000454132 SAMD9LQ8IVG5 1584 aa25.05■■□□□ 1.6
LMBR1-213ENST00000454132 SYCP2Q9BX26 1530 aa25.05■■□□□ 1.6
LMBR1-213ENST00000454132 MFAP1P55081 439 aaKnown RBP25.05■■□□□ 1.6
LMBR1-213ENST00000454132 PDE3AQ14432 1141 aa25.05■■□□□ 1.6
LMBR1-213ENST00000454132 L1TD1Q5T7N2 865 aaKnown RBP25.03■■□□□ 1.6
LMBR1-213ENST00000454132 GOLGA6L3A6NEY3 463 aa25.03■■□□□ 1.6
LMBR1-213ENST00000454132 TBC1D32Q96NH3 1257 aa25.02■■□□□ 1.6
LMBR1-213ENST00000454132 ASXL1Q8IXJ9 1541 aa25.02■■□□□ 1.6
LMBR1-213ENST00000454132 ABCA8O94911 1581 aa25.02■■□□□ 1.6
LMBR1-213ENST00000454132 CDCA8Q53HL2 280 aa25.01■■□□□ 1.59
LMBR1-213ENST00000454132 NLRP1Q9C000 1473 aa25.01■■□□□ 1.59
LMBR1-213ENST00000454132 RARSP54136 660 aaKnown RBP25■■□□□ 1.59
LMBR1-213ENST00000454132 CFAP70Q5T0N1 1121 aa25■■□□□ 1.59
LMBR1-213ENST00000454132 MCM4P33991 863 aa24.98■■□□□ 1.59
LMBR1-213ENST00000454132 PIK3C2GO75747 1445 aa24.98■■□□□ 1.59
LMBR1-213ENST00000454132 SYNJ2O15056 1496 aa24.97■■□□□ 1.59
LMBR1-213ENST00000454132 ARHGAP5Q13017 1502 aa24.96■■□□□ 1.59
LMBR1-213ENST00000454132 TCP11L2Q8N4U5 519 aa24.96■■□□□ 1.59
LMBR1-213ENST00000454132 ARHGEF5Q12774 1597 aa24.96■■□□□ 1.59
LMBR1-213ENST00000454132 RSPH4AQ5TD94 716 aa24.95■■□□□ 1.58
LMBR1-213ENST00000454132 PMFBP1Q8TBY8 1022 aa24.95■■□□□ 1.58
LMBR1-213ENST00000454132 CDC42BPBQ9Y5S2 1711 aa24.95■■□□□ 1.58
LMBR1-213ENST00000454132 PNNQ9H307 717 aaKnown RBP24.94■■□□□ 1.58
LMBR1-213ENST00000454132 EIF2AK4Q9P2K8 1649 aaKnown RBP24.94■■□□□ 1.58
LMBR1-213ENST00000454132 TRAK2O60296 914 aa24.93■■□□□ 1.58
LMBR1-213ENST00000454132 SENP3Q9H4L4 574 aaPredicted RBP24.92■■□□□ 1.58
LMBR1-213ENST00000454132 C22orf23Q9BZE7 217 aa24.92■■□□□ 1.58
LMBR1-213ENST00000454132 LAMC1P11047 1609 aa24.92■■□□□ 1.58
LMBR1-213ENST00000454132 NUP160Q12769 1436 aa24.91■■□□□ 1.58
LMBR1-213ENST00000454132 MORC1Q86VD1 984 aa24.91■■□□□ 1.58
LMBR1-213ENST00000454132 FOXD4L1Q9NU39 408 aa24.9■■□□□ 1.58
LMBR1-213ENST00000454132 RWDD1Q9H446 243 aaPredicted RBP24.89■■□□□ 1.58
LMBR1-213ENST00000454132 SCAF11Q99590 1463 aaKnown RBP24.89■■□□□ 1.58
LMBR1-213ENST00000454132 TSR2Q969E8 191 aaKnown RBP24.89■■□□□ 1.57
LMBR1-213ENST00000454132 CLASP1Q7Z460 1538 aa24.88■■□□□ 1.57
LMBR1-213ENST00000454132 VIRMAQ69YN4 1812 aaKnown RBP24.88■■□□□ 1.57
LMBR1-213ENST00000454132 FTSJ3Q8IY81 847 aaKnown RBP24.87■■□□□ 1.57
LMBR1-213ENST00000454132 SLC12A5Q9H2X9 1139 aa24.87■■□□□ 1.57
LMBR1-213ENST00000454132 ABCC2Q92887 1545 aa24.86■■□□□ 1.57
LMBR1-213ENST00000454132 FSD2A1L4K1 749 aa24.85■■□□□ 1.57
LMBR1-213ENST00000454132 UNC13BO14795 1591 aa24.85■■□□□ 1.57
LMBR1-213ENST00000454132 AFAP1Q8N556 730 aa24.85■■□□□ 1.57
LMBR1-213ENST00000454132 SYNMO15061 1565 aa24.85■■□□□ 1.57
LMBR1-213ENST00000454132 ADGRF5Q8IZF2 1346 aa24.84■■□□□ 1.57
LMBR1-213ENST00000454132 RUNDC1Q96C34 613 aa24.84■■□□□ 1.57
LMBR1-213ENST00000454132 CHMP5Q9NZZ3 219 aa24.84■■□□□ 1.57
LMBR1-213ENST00000454132 CHGAP10645 457 aaKnown RBP24.83■■□□□ 1.57
LMBR1-213ENST00000454132 MTHFSP49914 203 aa24.83■■□□□ 1.57
LMBR1-213ENST00000454132 VSIG10Q8N0Z9 540 aa24.83■■□□□ 1.57
LMBR1-213ENST00000454132 RNF17Q9BXT8 1623 aaKnown RBP24.82■■□□□ 1.56
LMBR1-213ENST00000454132 TRAK1Q9UPV9 953 aa24.82■■□□□ 1.56
LMBR1-213ENST00000454132 IQGAP3Q86VI3 1631 aa24.81■■□□□ 1.56
LMBR1-213ENST00000454132 MADDQ8WXG6 1647 aa24.81■■□□□ 1.56
LMBR1-213ENST00000454132 TTC37Q6PGP7 1564 aa24.81■■□□□ 1.56
LMBR1-213ENST00000454132 ITPRIPQ8IWB1 547 aa24.81■■□□□ 1.56
LMBR1-213ENST00000454132 PREX2Q70Z35 1606 aa24.8■■□□□ 1.56
LMBR1-213ENST00000454132 MYOM1P52179 1685 aa24.8■■□□□ 1.56
LMBR1-213ENST00000454132 MVPQ14764 893 aaKnown RBP24.8■■□□□ 1.56
LMBR1-213ENST00000454132 ERBB4Q15303 1308 aa24.8■■□□□ 1.56
LMBR1-213ENST00000454132 U2AF1L5P0DN76 240 aaPredicted RBP24.79■■□□□ 1.56
LMBR1-213ENST00000454132 U2AF1Q01081 240 aaKnown RBP eCLIP24.79■■□□□ 1.56
LMBR1-213ENST00000454132 IQGAP1P46940 1657 aa24.79■■□□□ 1.56
LMBR1-213ENST00000454132 HSCBQ8IWL3 235 aa24.79■■□□□ 1.56
LMBR1-213ENST00000454132 GRPEL1Q9HAV7 217 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms