RNA–Protein interactions for RNA: ENST00000453863.5

RNF220-206, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-206ENST00000453863 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
RNF220-206ENST00000453863 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.5□□□□□ -0.25
RNF220-206ENST00000453863 ZFYVE9O95405 1425 aa13.49□□□□□ -0.25
RNF220-206ENST00000453863 DIP2AQ14689 1571 aa13.49□□□□□ -0.25
RNF220-206ENST00000453863 RAB3GAP2Q9H2M9 1393 aa13.47□□□□□ -0.25
RNF220-206ENST00000453863 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
RNF220-206ENST00000453863 LTKP29376 864 aa13.47□□□□□ -0.25
RNF220-206ENST00000453863 BCANQ96GW7 911 aa13.47□□□□□ -0.25
RNF220-206ENST00000453863 CCDC144AA2RUR9 1427 aa13.46□□□□□ -0.26
RNF220-206ENST00000453863 ZNF326Q5BKZ1 582 aaKnown RBP13.45□□□□□ -0.26
RNF220-206ENST00000453863 ILDR1Q86SU0 546 aaPredicted RBP13.45□□□□□ -0.26
RNF220-206ENST00000453863 NKTRP30414 1462 aaKnown RBP13.43□□□□□ -0.26
RNF220-206ENST00000453863 NWD1Q149M9 1564 aa13.43□□□□□ -0.26
RNF220-206ENST00000453863 MPHOSPH9Q99550 1183 aa13.42□□□□□ -0.26
RNF220-206ENST00000453863 NEXMIFQ5QGS0 1516 aa13.41□□□□□ -0.26
RNF220-206ENST00000453863 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
RNF220-206ENST00000453863 STRCP1A6NGW2 1772 aa13.4□□□□□ -0.26
RNF220-206ENST00000453863 HRCP23327 699 aa13.4□□□□□ -0.26
RNF220-206ENST00000453863 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
RNF220-206ENST00000453863 PIK3R4Q99570 1358 aa13.39□□□□□ -0.27
RNF220-206ENST00000453863 PPLO60437 1756 aa13.38□□□□□ -0.27
RNF220-206ENST00000453863 SLC26A8Q96RN1 970 aa13.38□□□□□ -0.27
RNF220-206ENST00000453863 RPGRIP1LQ68CZ1 1315 aa13.38□□□□□ -0.27
RNF220-206ENST00000453863 CHD2O14647 1828 aaKnown RBP13.37□□□□□ -0.27
RNF220-206ENST00000453863 UBAP1LF5GYI3 381 aa13.37□□□□□ -0.27
RNF220-206ENST00000453863 KCNA6P17658 529 aa13.37□□□□□ -0.27
RNF220-206ENST00000453863 VGFO15240 615 aaPredicted RBP13.36□□□□□ -0.27
RNF220-206ENST00000453863 TOM1O60784 492 aa13.36□□□□□ -0.27
RNF220-206ENST00000453863 TBX22Q9Y458 520 aa13.36□□□□□ -0.27
RNF220-206ENST00000453863 ADAMTS13Q76LX8 1427 aa13.36□□□□□ -0.27
RNF220-206ENST00000453863 NRXN3Q9Y4C0 1643 aa13.35□□□□□ -0.27
RNF220-206ENST00000453863 FOXD1Q16676 465 aa13.35□□□□□ -0.27
RNF220-206ENST00000453863 NUTM2DQ5VT03 806 aaPredicted RBP13.35□□□□□ -0.27
RNF220-206ENST00000453863 ANKRD30BQ9BXX2 1392 aa13.34□□□□□ -0.27
RNF220-206ENST00000453863 IFT172Q9UG01 1749 aa13.34□□□□□ -0.27
RNF220-206ENST00000453863 SPATA31E1Q6ZUB1 1445 aa13.33□□□□□ -0.28
RNF220-206ENST00000453863 XRN1Q8IZH2 1706 aaKnown RBP13.33□□□□□ -0.28
RNF220-206ENST00000453863 TMEM94Q12767 1356 aa13.32□□□□□ -0.28
RNF220-206ENST00000453863 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
RNF220-206ENST00000453863 PROSER2Q86WR7 435 aaPredicted RBP13.32□□□□□ -0.28
RNF220-206ENST00000453863 SENP3Q9H4L4 574 aaPredicted RBP13.32□□□□□ -0.28
RNF220-206ENST00000453863 SCAF1Q9H7N4 1312 aaKnown RBP13.32□□□□□ -0.28
RNF220-206ENST00000453863 MSH6P52701 1360 aa13.32□□□□□ -0.28
RNF220-206ENST00000453863 LAMC1P11047 1609 aa13.31□□□□□ -0.28
RNF220-206ENST00000453863 NCOA3Q9Y6Q9 1424 aa13.3□□□□□ -0.28
RNF220-206ENST00000453863 MYOM2P54296 1465 aa13.29□□□□□ -0.28
RNF220-206ENST00000453863 C14orf37Q86TY3 774 aa13.29□□□□□ -0.28
RNF220-206ENST00000453863 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
RNF220-206ENST00000453863 SETD1AO15047 1707 aaKnown RBP13.28□□□□□ -0.28
RNF220-206ENST00000453863 RGL3Q3MIN7 710 aa13.28□□□□□ -0.28
RNF220-206ENST00000453863 PIP4K2BP78356 416 aa13.26□□□□□ -0.29
RNF220-206ENST00000453863 PTCH1Q13635 1447 aa13.26□□□□□ -0.29
RNF220-206ENST00000453863 PIK3C2GO75747 1445 aa13.25□□□□□ -0.29
RNF220-206ENST00000453863 DCCP43146 1447 aa13.25□□□□□ -0.29
RNF220-206ENST00000453863 PRAG1Q86YV5 1406 aa13.25□□□□□ -0.29
RNF220-206ENST00000453863 TRIM26Q12899 539 aaPredicted RBP13.25□□□□□ -0.29
RNF220-206ENST00000453863 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
RNF220-206ENST00000453863 PTPRUQ92729 1446 aa13.24□□□□□ -0.29
RNF220-206ENST00000453863 METP08581 1390 aa13.24□□□□□ -0.29
RNF220-206ENST00000453863 KNDC1Q76NI1 1749 aa13.23□□□□□ -0.29
RNF220-206ENST00000453863 STAC3Q96MF2 364 aa13.23□□□□□ -0.29
RNF220-206ENST00000453863 NRXN1Q9ULB1 1477 aa13.23□□□□□ -0.29
RNF220-206ENST00000453863 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.22□□□□□ -0.29
RNF220-206ENST00000453863 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
RNF220-206ENST00000453863 ROBO1Q9Y6N7 1651 aa13.21□□□□□ -0.29
RNF220-206ENST00000453863 ADGRF5Q8IZF2 1346 aa13.21□□□□□ -0.29
RNF220-206ENST00000453863 ATF3P18847 181 aa13.21□□□□□ -0.29
RNF220-206ENST00000453863 CADPS2Q86UW7 1296 aa13.21□□□□□ -0.29
RNF220-206ENST00000453863 NALCNQ8IZF0 1738 aa13.21□□□□□ -0.3
RNF220-206ENST00000453863 C19orf44Q9H6X5 657 aa13.2□□□□□ -0.3
RNF220-206ENST00000453863 FAM135BQ49AJ0 1406 aa13.2□□□□□ -0.3
RNF220-206ENST00000453863 RBM33Q96EV2 1170 aaKnown RBP13.19□□□□□ -0.3
RNF220-206ENST00000453863 TECPR2O15040 1411 aa13.19□□□□□ -0.3
RNF220-206ENST00000453863 LRPPRCP42704 1394 aaKnown RBP13.18□□□□□ -0.3
RNF220-206ENST00000453863 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
RNF220-206ENST00000453863 CDC42BPGQ6DT37 1551 aa13.17□□□□□ -0.3
RNF220-206ENST00000453863 YTHDC2Q9H6S0 1430 aaKnown RBP13.16□□□□□ -0.3
RNF220-206ENST00000453863 HSPA1LP34931 641 aa13.16□□□□□ -0.3
RNF220-206ENST00000453863 DCAF11Q8TEB1 546 aa13.16□□□□□ -0.3
RNF220-206ENST00000453863 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
RNF220-206ENST00000453863 DHX57Q6P158 1386 aaKnown RBP13.16□□□□□ -0.3
RNF220-206ENST00000453863 ROBO2Q9HCK4 1378 aa13.16□□□□□ -0.3
RNF220-206ENST00000453863 PHLPP1O60346 1717 aa13.15□□□□□ -0.3
RNF220-206ENST00000453863 ABCC11Q96J66 1382 aa13.15□□□□□ -0.3
RNF220-206ENST00000453863 KIAA1210Q9ULL0 1709 aa13.14□□□□□ -0.31
RNF220-206ENST00000453863 C14orf93Q9H972 538 aaKnown RBP13.14□□□□□ -0.31
RNF220-206ENST00000453863 DLC1Q96QB1 1528 aa13.13□□□□□ -0.31
RNF220-206ENST00000453863 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
RNF220-206ENST00000453863 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
RNF220-206ENST00000453863 MST1RQ04912 1400 aa13.13□□□□□ -0.31
RNF220-206ENST00000453863 STK26Q9P289 416 aa13.12□□□□□ -0.31
RNF220-206ENST00000453863 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
RNF220-206ENST00000453863 CFAP70Q5T0N1 1121 aa13.11□□□□□ -0.31
RNF220-206ENST00000453863 TMEM132EQ6IEE7 984 aa13.1□□□□□ -0.31
RNF220-206ENST00000453863 MED1Q15648 1581 aaPredicted RBP13.1□□□□□ -0.31
RNF220-206ENST00000453863 NHSL1Q5SYE7 1610 aa13.1□□□□□ -0.31
RNF220-206ENST00000453863 COL16A1Q07092 1604 aaPredicted RBP13.09□□□□□ -0.31
RNF220-206ENST00000453863 FMN2Q9NZ56 1722 aa13.08□□□□□ -0.32
RNF220-206ENST00000453863 ADGRB2O60241 1585 aa13.08□□□□□ -0.32
RNF220-206ENST00000453863 SIRT1Q96EB6 747 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms