RNA–Protein interactions for RNA: ENST00000452811.1

LRRTM1-207, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 5

Gene LRRTM1, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-207ENST00000452811 SPHKAPQ2M3C7 1700 aa27.8■■■□□ 2.04
LRRTM1-207ENST00000452811 KCNA6P17658 529 aa27.79■■■□□ 2.04
LRRTM1-207ENST00000452811 SLC26A8Q96RN1 970 aa27.79■■■□□ 2.04
LRRTM1-207ENST00000452811 PIP4K2BP78356 416 aa27.78■■■□□ 2.04
LRRTM1-207ENST00000452811 HFM1A2PYH4 1435 aa27.77■■■□□ 2.04
LRRTM1-207ENST00000452811 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.76■■■□□ 2.03
LRRTM1-207ENST00000452811 NWD1Q149M9 1564 aa27.76■■■□□ 2.03
LRRTM1-207ENST00000452811 CHD2O14647 1828 aaKnown RBP27.74■■■□□ 2.03
LRRTM1-207ENST00000452811 CHGAP10645 457 aaKnown RBP27.74■■■□□ 2.03
LRRTM1-207ENST00000452811 SCAF1Q9H7N4 1312 aaKnown RBP27.73■■■□□ 2.03
LRRTM1-207ENST00000452811 HSPA1LP34931 641 aa27.73■■■□□ 2.03
LRRTM1-207ENST00000452811 NKTRP30414 1462 aaKnown RBP27.7■■■□□ 2.03
LRRTM1-207ENST00000452811 PPP1R15AO75807 674 aaPredicted RBP27.7■■■□□ 2.02
LRRTM1-207ENST00000452811 TBX22Q9Y458 520 aa27.7■■■□□ 2.02
LRRTM1-207ENST00000452811 DISP3Q9P2K9 1392 aa27.7■■■□□ 2.02
LRRTM1-207ENST00000452811 BCANQ96GW7 911 aa27.69■■■□□ 2.02
LRRTM1-207ENST00000452811 TMEM94Q12767 1356 aa27.68■■■□□ 2.02
LRRTM1-207ENST00000452811 TRPM2O94759 1503 aa27.67■■■□□ 2.02
LRRTM1-207ENST00000452811 ADAMTS13Q76LX8 1427 aa27.67■■■□□ 2.02
LRRTM1-207ENST00000452811 DIP2AQ14689 1571 aa27.66■■■□□ 2.02
LRRTM1-207ENST00000452811 PROSER2Q86WR7 435 aaPredicted RBP27.65■■■□□ 2.02
LRRTM1-207ENST00000452811 CLTCL1P53675 1640 aa27.65■■■□□ 2.02
LRRTM1-207ENST00000452811 NUTM2DQ5VT03 806 aaPredicted RBP27.63■■■□□ 2.01
LRRTM1-207ENST00000452811 SENP3Q9H4L4 574 aaPredicted RBP27.62■■■□□ 2.01
LRRTM1-207ENST00000452811 KIF1BO60333 1816 aa27.62■■■□□ 2.01
LRRTM1-207ENST00000452811 PIK3R4Q99570 1358 aa27.61■■■□□ 2.01
LRRTM1-207ENST00000452811 TRIM52Q96A61 297 aa27.6■■■□□ 2.01
LRRTM1-207ENST00000452811 FAM135BQ49AJ0 1406 aa27.58■■■□□ 2
LRRTM1-207ENST00000452811 NRXN3Q9Y4C0 1643 aa27.57■■■□□ 2
LRRTM1-207ENST00000452811 RBM33Q96EV2 1170 aaKnown RBP27.57■■■□□ 2
LRRTM1-207ENST00000452811 SETBP1Q9Y6X0 1596 aa27.56■■■□□ 2
LRRTM1-207ENST00000452811 SLC4A1APQ9BWU0 796 aaKnown RBP27.56■■■□□ 2
LRRTM1-207ENST00000452811 NCOA3Q9Y6Q9 1424 aa27.56■■■□□ 2
LRRTM1-207ENST00000452811 ZNF326Q5BKZ1 582 aaKnown RBP27.54■■■□□ 2
LRRTM1-207ENST00000452811 NEXMIFQ5QGS0 1516 aa27.54■■■□□ 2
LRRTM1-207ENST00000452811 ILDR2Q71H61 639 aa27.54■■■□□ 2
LRRTM1-207ENST00000452811 MSH6P52701 1360 aa27.51■■□□□ 1.99
LRRTM1-207ENST00000452811 PTPRUQ92729 1446 aa27.5■■□□□ 1.99
LRRTM1-207ENST00000452811 MED1Q15648 1581 aaPredicted RBP27.49■■□□□ 1.99
LRRTM1-207ENST00000452811 ROBO1Q9Y6N7 1651 aa27.48■■□□□ 1.99
LRRTM1-207ENST00000452811 AMOTL2Q9Y2J4 779 aa27.47■■□□□ 1.99
LRRTM1-207ENST00000452811 XRN1Q8IZH2 1706 aaKnown RBP27.47■■□□□ 1.99
LRRTM1-207ENST00000452811 ACIN1Q9UKV3 1341 aaKnown RBP27.44■■□□□ 1.98
LRRTM1-207ENST00000452811 SLAIN2Q9P270 581 aa27.44■■□□□ 1.98
LRRTM1-207ENST00000452811 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.44■■□□□ 1.98
LRRTM1-207ENST00000452811 RPGRIP1LQ68CZ1 1315 aa27.42■■□□□ 1.98
LRRTM1-207ENST00000452811 MPHOSPH9Q99550 1183 aa27.42■■□□□ 1.98
LRRTM1-207ENST00000452811 METP08581 1390 aa27.42■■□□□ 1.98
LRRTM1-207ENST00000452811 PPLO60437 1756 aa27.41■■□□□ 1.98
LRRTM1-207ENST00000452811 C19orf44Q9H6X5 657 aa27.41■■□□□ 1.98
LRRTM1-207ENST00000452811 VGFO15240 615 aaPredicted RBP27.4■■□□□ 1.98
LRRTM1-207ENST00000452811 FOXD1Q16676 465 aa27.4■■□□□ 1.98
LRRTM1-207ENST00000452811 SETD5Q9C0A6 1442 aa27.39■■□□□ 1.97
LRRTM1-207ENST00000452811 SETD1AO15047 1707 aaKnown RBP27.38■■□□□ 1.97
LRRTM1-207ENST00000452811 C14orf37Q86TY3 774 aa27.35■■□□□ 1.97
LRRTM1-207ENST00000452811 CADPS2Q86UW7 1296 aa27.35■■□□□ 1.97
LRRTM1-207ENST00000452811 CCDC144AA2RUR9 1427 aa27.33■■□□□ 1.97
LRRTM1-207ENST00000452811 DCCP43146 1447 aa27.33■■□□□ 1.96
LRRTM1-207ENST00000452811 SOCS7O14512 581 aa27.32■■□□□ 1.96
LRRTM1-207ENST00000452811 ATF3P18847 181 aa27.32■■□□□ 1.96
LRRTM1-207ENST00000452811 PHLPP1O60346 1717 aa27.32■■□□□ 1.96
LRRTM1-207ENST00000452811 SPATA31E1Q6ZUB1 1445 aa27.32■■□□□ 1.96
LRRTM1-207ENST00000452811 IFT172Q9UG01 1749 aa27.29■■□□□ 1.96
LRRTM1-207ENST00000452811 PRAG1Q86YV5 1406 aa27.27■■□□□ 1.96
LRRTM1-207ENST00000452811 RAB3GAP2Q9H2M9 1393 aa27.27■■□□□ 1.96
LRRTM1-207ENST00000452811 COL16A1Q07092 1604 aaPredicted RBP27.25■■□□□ 1.95
LRRTM1-207ENST00000452811 PTCH1Q13635 1447 aa27.24■■□□□ 1.95
LRRTM1-207ENST00000452811 ADGRL3Q9HAR2 1447 aa27.24■■□□□ 1.95
LRRTM1-207ENST00000452811 AHDC1Q5TGY3 1603 aaPredicted RBP27.24■■□□□ 1.95
LRRTM1-207ENST00000452811 NALCNQ8IZF0 1738 aa27.24■■□□□ 1.95
LRRTM1-207ENST00000452811 PHF23Q9BUL5 403 aaPredicted RBP27.23■■□□□ 1.95
LRRTM1-207ENST00000452811 ANKRD30BQ9BXX2 1392 aa27.22■■□□□ 1.95
LRRTM1-207ENST00000452811 RGL3Q3MIN7 710 aa27.21■■□□□ 1.95
LRRTM1-207ENST00000452811 MST1RQ04912 1400 aa27.21■■□□□ 1.95
LRRTM1-207ENST00000452811 ADGRF5Q8IZF2 1346 aa27.2■■□□□ 1.95
LRRTM1-207ENST00000452811 BRINP3Q76B58 766 aa27.2■■□□□ 1.94
LRRTM1-207ENST00000452811 JCADQ9P266 1359 aa27.2■■□□□ 1.94
LRRTM1-207ENST00000452811 ROBO2Q9HCK4 1378 aa27.19■■□□□ 1.94
LRRTM1-207ENST00000452811 HRCP23327 699 aa27.18■■□□□ 1.94
LRRTM1-207ENST00000452811 RGS17Q9UGC6 210 aaPredicted RBP27.17■■□□□ 1.94
LRRTM1-207ENST00000452811 ASXL1Q8IXJ9 1541 aa27.15■■□□□ 1.94
LRRTM1-207ENST00000452811 NHSL1Q5SYE7 1610 aa27.14■■□□□ 1.94
LRRTM1-207ENST00000452811 PIK3C2GO75747 1445 aa27.14■■□□□ 1.93
LRRTM1-207ENST00000452811 SHPRHQ149N8 1683 aa27.12■■□□□ 1.93
LRRTM1-207ENST00000452811 TECPR2O15040 1411 aa27.1■■□□□ 1.93
LRRTM1-207ENST00000452811 NRXN1Q9ULB1 1477 aa27.09■■□□□ 1.93
LRRTM1-207ENST00000452811 KNDC1Q76NI1 1749 aa27.08■■□□□ 1.93
LRRTM1-207ENST00000452811 SPATA31A6Q5VVP1 1343 aa27.08■■□□□ 1.93
LRRTM1-207ENST00000452811 LRPPRCP42704 1394 aaKnown RBP27.08■■□□□ 1.93
LRRTM1-207ENST00000452811 C1orf167Q5SNV9 1468 aa27.07■■□□□ 1.92
LRRTM1-207ENST00000452811 ABCC11Q96J66 1382 aa27.07■■□□□ 1.92
LRRTM1-207ENST00000452811 MYOM2P54296 1465 aa27.06■■□□□ 1.92
LRRTM1-207ENST00000452811 LAMC1P11047 1609 aa27.06■■□□□ 1.92
LRRTM1-207ENST00000452811 C14orf93Q9H972 538 aaKnown RBP27.05■■□□□ 1.92
LRRTM1-207ENST00000452811 TMEM132EQ6IEE7 984 aa27.02■■□□□ 1.92
LRRTM1-207ENST00000452811 LRP6O75581 1613 aa27.01■■□□□ 1.92
LRRTM1-207ENST00000452811 CDC42BPGQ6DT37 1551 aa27.01■■□□□ 1.92
LRRTM1-207ENST00000452811 YTHDC2Q9H6S0 1430 aaKnown RBP27■■□□□ 1.91
LRRTM1-207ENST00000452811 LRRC59Q96AG4 307 aaKnown RBP27■■□□□ 1.91
LRRTM1-207ENST00000452811 SIRT1Q96EB6 747 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms