RNA–Protein interactions for RNA: ENST00000452374.6

COMMD9-203, Transcript of COMM domain containing 9, humanhuman

TSL 2 BASIC

Gene COMMD9, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-203ENST00000452374 LRRC7Q96NW7 1537 aa16.72■□□□□ 0.27
COMMD9-203ENST00000452374 SPHKAPQ2M3C7 1700 aa16.7■□□□□ 0.26
COMMD9-203ENST00000452374 ZFYVE9O95405 1425 aa16.7■□□□□ 0.26
COMMD9-203ENST00000452374 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.69■□□□□ 0.26
COMMD9-203ENST00000452374 NAIPQ13075 1403 aa16.69■□□□□ 0.26
COMMD9-203ENST00000452374 PLEKHG1Q9ULL1 1385 aa16.67■□□□□ 0.26
COMMD9-203ENST00000452374 XIRP1Q702N8 1843 aaKnown RBP16.67■□□□□ 0.26
COMMD9-203ENST00000452374 HFM1A2PYH4 1435 aa16.67■□□□□ 0.26
COMMD9-203ENST00000452374 RIMS2Q9UQ26 1411 aa16.67■□□□□ 0.26
COMMD9-203ENST00000452374 NWD1Q149M9 1564 aa16.67■□□□□ 0.26
COMMD9-203ENST00000452374 KCNA6P17658 529 aa16.66■□□□□ 0.26
COMMD9-203ENST00000452374 NKTRP30414 1462 aaKnown RBP16.66■□□□□ 0.26
COMMD9-203ENST00000452374 PPP1R15AO75807 674 aaPredicted RBP16.65■□□□□ 0.26
COMMD9-203ENST00000452374 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
COMMD9-203ENST00000452374 ALKQ9UM73 1620 aa16.64■□□□□ 0.25
COMMD9-203ENST00000452374 CHD2O14647 1828 aaKnown RBP16.64■□□□□ 0.25
COMMD9-203ENST00000452374 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
COMMD9-203ENST00000452374 CHGAP10645 457 aaKnown RBP16.63■□□□□ 0.25
COMMD9-203ENST00000452374 PIP4K2BP78356 416 aa16.63■□□□□ 0.25
COMMD9-203ENST00000452374 BCANQ96GW7 911 aa16.63■□□□□ 0.25
COMMD9-203ENST00000452374 SLC26A8Q96RN1 970 aa16.62■□□□□ 0.25
COMMD9-203ENST00000452374 KIF1BO60333 1816 aa16.61■□□□□ 0.25
COMMD9-203ENST00000452374 TRPM2O94759 1503 aa16.61■□□□□ 0.25
COMMD9-203ENST00000452374 TBX22Q9Y458 520 aa16.61■□□□□ 0.25
COMMD9-203ENST00000452374 DISP3Q9P2K9 1392 aa16.61■□□□□ 0.25
COMMD9-203ENST00000452374 PIK3R4Q99570 1358 aa16.6■□□□□ 0.25
COMMD9-203ENST00000452374 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
COMMD9-203ENST00000452374 TMEM94Q12767 1356 aa16.58■□□□□ 0.24
COMMD9-203ENST00000452374 CLTCL1P53675 1640 aa16.57■□□□□ 0.24
COMMD9-203ENST00000452374 NCOA3Q9Y6Q9 1424 aa16.57■□□□□ 0.24
COMMD9-203ENST00000452374 HSPA1LP34931 641 aa16.57■□□□□ 0.24
COMMD9-203ENST00000452374 PROSER2Q86WR7 435 aaPredicted RBP16.57■□□□□ 0.24
COMMD9-203ENST00000452374 ADAMTS13Q76LX8 1427 aa16.55■□□□□ 0.24
COMMD9-203ENST00000452374 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
COMMD9-203ENST00000452374 TRIM52Q96A61 297 aa16.55■□□□□ 0.24
COMMD9-203ENST00000452374 SETBP1Q9Y6X0 1596 aa16.55■□□□□ 0.24
COMMD9-203ENST00000452374 FAM135BQ49AJ0 1406 aa16.53■□□□□ 0.24
COMMD9-203ENST00000452374 MSH6P52701 1360 aa16.53■□□□□ 0.24
COMMD9-203ENST00000452374 ZNF326Q5BKZ1 582 aaKnown RBP16.52■□□□□ 0.24
COMMD9-203ENST00000452374 SLC4A1APQ9BWU0 796 aaKnown RBP16.52■□□□□ 0.24
COMMD9-203ENST00000452374 NRXN3Q9Y4C0 1643 aa16.52■□□□□ 0.23
COMMD9-203ENST00000452374 NEXMIFQ5QGS0 1516 aa16.51■□□□□ 0.23
COMMD9-203ENST00000452374 NUTM2DQ5VT03 806 aaPredicted RBP16.5■□□□□ 0.23
COMMD9-203ENST00000452374 MED1Q15648 1581 aaPredicted RBP16.49■□□□□ 0.23
COMMD9-203ENST00000452374 ROBO1Q9Y6N7 1651 aa16.49■□□□□ 0.23
COMMD9-203ENST00000452374 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
COMMD9-203ENST00000452374 XRN1Q8IZH2 1706 aaKnown RBP16.48■□□□□ 0.23
COMMD9-203ENST00000452374 RPGRIP1LQ68CZ1 1315 aa16.47■□□□□ 0.23
COMMD9-203ENST00000452374 VGFO15240 615 aaPredicted RBP16.46■□□□□ 0.23
COMMD9-203ENST00000452374 AMOTL2Q9Y2J4 779 aa16.45■□□□□ 0.22
COMMD9-203ENST00000452374 PPLO60437 1756 aa16.45■□□□□ 0.22
COMMD9-203ENST00000452374 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.45■□□□□ 0.22
COMMD9-203ENST00000452374 C19orf44Q9H6X5 657 aa16.44■□□□□ 0.22
COMMD9-203ENST00000452374 C14orf37Q86TY3 774 aa16.43■□□□□ 0.22
COMMD9-203ENST00000452374 CADPS2Q86UW7 1296 aa16.43■□□□□ 0.22
COMMD9-203ENST00000452374 RBM33Q96EV2 1170 aaKnown RBP16.43■□□□□ 0.22
COMMD9-203ENST00000452374 SLAIN2Q9P270 581 aa16.43■□□□□ 0.22
COMMD9-203ENST00000452374 CCDC144AA2RUR9 1427 aa16.43■□□□□ 0.22
COMMD9-203ENST00000452374 DCCP43146 1447 aa16.43■□□□□ 0.22
COMMD9-203ENST00000452374 PTPRUQ92729 1446 aa16.43■□□□□ 0.22
COMMD9-203ENST00000452374 SETD5Q9C0A6 1442 aa16.42■□□□□ 0.22
COMMD9-203ENST00000452374 ATF3P18847 181 aa16.41■□□□□ 0.22
COMMD9-203ENST00000452374 ILDR2Q71H61 639 aa16.41■□□□□ 0.22
COMMD9-203ENST00000452374 MPHOSPH9Q99550 1183 aa16.41■□□□□ 0.22
COMMD9-203ENST00000452374 SETD1AO15047 1707 aaKnown RBP16.41■□□□□ 0.22
COMMD9-203ENST00000452374 PHLPP1O60346 1717 aa16.41■□□□□ 0.22
COMMD9-203ENST00000452374 METP08581 1390 aa16.39■□□□□ 0.21
COMMD9-203ENST00000452374 SOCS7O14512 581 aa16.38■□□□□ 0.21
COMMD9-203ENST00000452374 IFT172Q9UG01 1749 aa16.38■□□□□ 0.21
COMMD9-203ENST00000452374 PRAG1Q86YV5 1406 aa16.37■□□□□ 0.21
COMMD9-203ENST00000452374 PTCH1Q13635 1447 aa16.36■□□□□ 0.21
COMMD9-203ENST00000452374 ANKRD30BQ9BXX2 1392 aa16.36■□□□□ 0.21
COMMD9-203ENST00000452374 SPATA31E1Q6ZUB1 1445 aa16.36■□□□□ 0.21
COMMD9-203ENST00000452374 AHDC1Q5TGY3 1603 aaPredicted RBP16.35■□□□□ 0.21
COMMD9-203ENST00000452374 ADGRL3Q9HAR2 1447 aa16.35■□□□□ 0.21
COMMD9-203ENST00000452374 COL16A1Q07092 1604 aaPredicted RBP16.34■□□□□ 0.21
COMMD9-203ENST00000452374 NALCNQ8IZF0 1738 aa16.33■□□□□ 0.21
COMMD9-203ENST00000452374 RAB3GAP2Q9H2M9 1393 aa16.33■□□□□ 0.2
COMMD9-203ENST00000452374 JCADQ9P266 1359 aa16.33■□□□□ 0.2
COMMD9-203ENST00000452374 HRCP23327 699 aa16.31■□□□□ 0.2
COMMD9-203ENST00000452374 MST1RQ04912 1400 aa16.3■□□□□ 0.2
COMMD9-203ENST00000452374 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
COMMD9-203ENST00000452374 NHSL1Q5SYE7 1610 aa16.29■□□□□ 0.2
COMMD9-203ENST00000452374 ASXL1Q8IXJ9 1541 aa16.29■□□□□ 0.2
COMMD9-203ENST00000452374 KNDC1Q76NI1 1749 aa16.28■□□□□ 0.2
COMMD9-203ENST00000452374 LAMC1P11047 1609 aa16.28■□□□□ 0.2
COMMD9-203ENST00000452374 RGL3Q3MIN7 710 aa16.28■□□□□ 0.2
COMMD9-203ENST00000452374 BRINP3Q76B58 766 aa16.28■□□□□ 0.2
COMMD9-203ENST00000452374 PIK3C2GO75747 1445 aa16.28■□□□□ 0.2
COMMD9-203ENST00000452374 SPATA31A6Q5VVP1 1343 aa16.27■□□□□ 0.2
COMMD9-203ENST00000452374 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
COMMD9-203ENST00000452374 ADGRF5Q8IZF2 1346 aa16.26■□□□□ 0.19
COMMD9-203ENST00000452374 MYOM2P54296 1465 aa16.26■□□□□ 0.19
COMMD9-203ENST00000452374 TECPR2O15040 1411 aa16.26■□□□□ 0.19
COMMD9-203ENST00000452374 NRXN1Q9ULB1 1477 aa16.23■□□□□ 0.19
COMMD9-203ENST00000452374 CDC42BPGQ6DT37 1551 aa16.23■□□□□ 0.19
COMMD9-203ENST00000452374 LRPPRCP42704 1394 aaKnown RBP16.23■□□□□ 0.19
COMMD9-203ENST00000452374 ABCC11Q96J66 1382 aa16.23■□□□□ 0.19
COMMD9-203ENST00000452374 C1orf167Q5SNV9 1468 aa16.22■□□□□ 0.19
COMMD9-203ENST00000452374 LRRC59Q96AG4 307 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms