RNA–Protein interactions for RNA: ENST00000450882.1

MRPL28-206, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-206ENST00000450882 RIMS2Q9UQ26 1411 aa23.93■■□□□ 1.42
MRPL28-206ENST00000450882 MED14O60244 1454 aa23.91■■□□□ 1.42
MRPL28-206ENST00000450882 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.9■■□□□ 1.42
MRPL28-206ENST00000450882 IQGAP1P46940 1657 aa23.89■■□□□ 1.42
MRPL28-206ENST00000450882 BCANQ96GW7 911 aa23.89■■□□□ 1.41
MRPL28-206ENST00000450882 ZFYVE9O95405 1425 aa23.87■■□□□ 1.41
MRPL28-206ENST00000450882 NUTM2DQ5VT03 806 aaPredicted RBP23.86■■□□□ 1.41
MRPL28-206ENST00000450882 PCGF6Q9BYE7 350 aa23.84■■□□□ 1.41
MRPL28-206ENST00000450882 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
MRPL28-206ENST00000450882 ANKRD30BQ9BXX2 1392 aa23.83■■□□□ 1.41
MRPL28-206ENST00000450882 PLEKHG1Q9ULL1 1385 aa23.81■■□□□ 1.4
MRPL28-206ENST00000450882 RGL3Q3MIN7 710 aa23.81■■□□□ 1.4
MRPL28-206ENST00000450882 ZNF335Q9H4Z2 1342 aaPredicted RBP23.8■■□□□ 1.4
MRPL28-206ENST00000450882 RPGRIP1LQ68CZ1 1315 aa23.79■■□□□ 1.4
MRPL28-206ENST00000450882 SLC26A8Q96RN1 970 aa23.78■■□□□ 1.4
MRPL28-206ENST00000450882 NEXMIFQ5QGS0 1516 aa23.78■■□□□ 1.4
MRPL28-206ENST00000450882 SPATA31E1Q6ZUB1 1445 aa23.76■■□□□ 1.39
MRPL28-206ENST00000450882 VGFO15240 615 aaPredicted RBP23.75■■□□□ 1.39
MRPL28-206ENST00000450882 DHX57Q6P158 1386 aaKnown RBP23.72■■□□□ 1.39
MRPL28-206ENST00000450882 PPLO60437 1756 aa23.7■■□□□ 1.39
MRPL28-206ENST00000450882 LTBP4Q8N2S1 1624 aa23.7■■□□□ 1.39
MRPL28-206ENST00000450882 CERKQ8TCT0 537 aa23.69■■□□□ 1.38
MRPL28-206ENST00000450882 TBX22Q9Y458 520 aa23.69■■□□□ 1.38
MRPL28-206ENST00000450882 DIP2AQ14689 1571 aa23.68■■□□□ 1.38
MRPL28-206ENST00000450882 ADAMTS13Q76LX8 1427 aa23.67■■□□□ 1.38
MRPL28-206ENST00000450882 CPS1P31327 1500 aa23.67■■□□□ 1.38
MRPL28-206ENST00000450882 SETBP1Q9Y6X0 1596 aa23.66■■□□□ 1.38
MRPL28-206ENST00000450882 KCNA6P17658 529 aa23.64■■□□□ 1.37
MRPL28-206ENST00000450882 IFT172Q9UG01 1749 aa23.64■■□□□ 1.37
MRPL28-206ENST00000450882 NRXN3Q9Y4C0 1643 aa23.63■■□□□ 1.37
MRPL28-206ENST00000450882 ADGRF5Q8IZF2 1346 aa23.62■■□□□ 1.37
MRPL28-206ENST00000450882 STRCP1A6NGW2 1772 aa23.61■■□□□ 1.37
MRPL28-206ENST00000450882 NEUROD1Q13562 356 aa23.6■■□□□ 1.37
MRPL28-206ENST00000450882 DCAF11Q8TEB1 546 aa23.6■■□□□ 1.37
MRPL28-206ENST00000450882 KDM2AQ9Y2K7 1162 aa23.6■■□□□ 1.37
MRPL28-206ENST00000450882 PIK3R4Q99570 1358 aa23.6■■□□□ 1.37
MRPL28-206ENST00000450882 SIN3AQ96ST3 1273 aa23.59■■□□□ 1.37
MRPL28-206ENST00000450882 MYOM2P54296 1465 aa23.59■■□□□ 1.37
MRPL28-206ENST00000450882 NWD1Q149M9 1564 aa23.57■■□□□ 1.36
MRPL28-206ENST00000450882 CHD2O14647 1828 aaKnown RBP23.57■■□□□ 1.36
MRPL28-206ENST00000450882 IQSEC2Q5JU85 1478 aa23.56■■□□□ 1.36
MRPL28-206ENST00000450882 METP08581 1390 aa23.56■■□□□ 1.36
MRPL28-206ENST00000450882 ALKQ9UM73 1620 aa23.56■■□□□ 1.36
MRPL28-206ENST00000450882 PROSER2Q86WR7 435 aaPredicted RBP23.56■■□□□ 1.36
MRPL28-206ENST00000450882 NKTRP30414 1462 aaKnown RBP23.56■■□□□ 1.36
MRPL28-206ENST00000450882 LRRC7Q96NW7 1537 aa23.55■■□□□ 1.36
MRPL28-206ENST00000450882 STAC3Q96MF2 364 aa23.55■■□□□ 1.36
MRPL28-206ENST00000450882 AMOTL2Q9Y2J4 779 aa23.55■■□□□ 1.36
MRPL28-206ENST00000450882 PIK3C2GO75747 1445 aa23.55■■□□□ 1.36
MRPL28-206ENST00000450882 NRXN1Q9ULB1 1477 aa23.52■■□□□ 1.36
MRPL28-206ENST00000450882 PTPRUQ92729 1446 aa23.51■■□□□ 1.35
MRPL28-206ENST00000450882 TMEM94Q12767 1356 aa23.51■■□□□ 1.35
MRPL28-206ENST00000450882 SETD1AO15047 1707 aaKnown RBP23.5■■□□□ 1.35
MRPL28-206ENST00000450882 RBM33Q96EV2 1170 aaKnown RBP23.49■■□□□ 1.35
MRPL28-206ENST00000450882 C14orf37Q86TY3 774 aa23.48■■□□□ 1.35
MRPL28-206ENST00000450882 FBXO41Q8TF61 875 aa23.48■■□□□ 1.35
MRPL28-206ENST00000450882 LAMC1P11047 1609 aa23.48■■□□□ 1.35
MRPL28-206ENST00000450882 XRN1Q8IZH2 1706 aaKnown RBP23.47■■□□□ 1.35
MRPL28-206ENST00000450882 UBAP1LF5GYI3 381 aa23.47■■□□□ 1.35
MRPL28-206ENST00000450882 CFAP70Q5T0N1 1121 aa23.47■■□□□ 1.35
MRPL28-206ENST00000450882 C14orf93Q9H972 538 aaKnown RBP23.47■■□□□ 1.35
MRPL28-206ENST00000450882 L3MBTL2Q969R5 705 aa23.46■■□□□ 1.35
MRPL28-206ENST00000450882 TONSLQ96HA7 1378 aa23.45■■□□□ 1.34
MRPL28-206ENST00000450882 TMEM132EQ6IEE7 984 aa23.45■■□□□ 1.34
MRPL28-206ENST00000450882 CCER1Q8TC90 406 aaPredicted RBP23.44■■□□□ 1.34
MRPL28-206ENST00000450882 STK26Q9P289 416 aa23.44■■□□□ 1.34
MRPL28-206ENST00000450882 XIRP1Q702N8 1843 aaKnown RBP23.43■■□□□ 1.34
MRPL28-206ENST00000450882 TOM1O60784 492 aa23.42■■□□□ 1.34
MRPL28-206ENST00000450882 MSH6P52701 1360 aa23.41■■□□□ 1.34
MRPL28-206ENST00000450882 ASXL1Q8IXJ9 1541 aa23.41■■□□□ 1.34
MRPL28-206ENST00000450882 LRPPRCP42704 1394 aaKnown RBP23.4■■□□□ 1.34
MRPL28-206ENST00000450882 PTCH1Q13635 1447 aa23.4■■□□□ 1.34
MRPL28-206ENST00000450882 NCOA3Q9Y6Q9 1424 aa23.4■■□□□ 1.34
MRPL28-206ENST00000450882 SCAF1Q9H7N4 1312 aaKnown RBP23.39■■□□□ 1.34
MRPL28-206ENST00000450882 CLSPNQ9HAW4 1339 aa23.39■■□□□ 1.34
MRPL28-206ENST00000450882 PRAG1Q86YV5 1406 aa23.39■■□□□ 1.33
MRPL28-206ENST00000450882 YTHDC2Q9H6S0 1430 aaKnown RBP23.39■■□□□ 1.33
MRPL28-206ENST00000450882 ROBO2Q9HCK4 1378 aa23.38■■□□□ 1.33
MRPL28-206ENST00000450882 PIP4K2BP78356 416 aa23.36■■□□□ 1.33
MRPL28-206ENST00000450882 ILDR1Q86SU0 546 aaPredicted RBP23.36■■□□□ 1.33
MRPL28-206ENST00000450882 ABCC11Q96J66 1382 aa23.36■■□□□ 1.33
MRPL28-206ENST00000450882 TECPR2O15040 1411 aa23.34■■□□□ 1.33
MRPL28-206ENST00000450882 C19orf44Q9H6X5 657 aa23.34■■□□□ 1.33
MRPL28-206ENST00000450882 KNDC1Q76NI1 1749 aa23.33■■□□□ 1.33
MRPL28-206ENST00000450882 ADGRB1O14514 1584 aa23.33■■□□□ 1.33
MRPL28-206ENST00000450882 ATF3P18847 181 aa23.33■■□□□ 1.33
MRPL28-206ENST00000450882 KIAA1210Q9ULL0 1709 aa23.32■■□□□ 1.32
MRPL28-206ENST00000450882 TRAK1Q9UPV9 953 aa23.31■■□□□ 1.32
MRPL28-206ENST00000450882 ADGRL3Q9HAR2 1447 aa23.31■■□□□ 1.32
MRPL28-206ENST00000450882 WAPLQ7Z5K2 1190 aa23.3■■□□□ 1.32
MRPL28-206ENST00000450882 CADPS2Q86UW7 1296 aa23.3■■□□□ 1.32
MRPL28-206ENST00000450882 POGKQ9P215 609 aa23.29■■□□□ 1.32
MRPL28-206ENST00000450882 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.29■■□□□ 1.32
MRPL28-206ENST00000450882 FAM135BQ49AJ0 1406 aa23.28■■□□□ 1.32
MRPL28-206ENST00000450882 NALCNQ8IZF0 1738 aa23.28■■□□□ 1.32
MRPL28-206ENST00000450882 NBPF1Q3BBV0 1214 aa23.27■■□□□ 1.32
MRPL28-206ENST00000450882 SIRT1Q96EB6 747 aa23.27■■□□□ 1.32
MRPL28-206ENST00000450882 PRAM1Q96QH2 718 aa23.27■■□□□ 1.32
MRPL28-206ENST00000450882 DCCP43146 1447 aa23.26■■□□□ 1.31
MRPL28-206ENST00000450882 DLC1Q96QB1 1528 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms