RNA–Protein interactions for RNA: ENST00000450501.5

COPS7B-215, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-215ENST00000450501 HDGFP51858 240 aaKnown RBP27.73■■■□□ 2.03
COPS7B-215ENST00000450501 ZFYVE9O95405 1425 aa27.71■■■□□ 2.03
COPS7B-215ENST00000450501 RIMS2Q9UQ26 1411 aa27.71■■■□□ 2.03
COPS7B-215ENST00000450501 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.69■■■□□ 2.02
COPS7B-215ENST00000450501 CCDC144AA2RUR9 1427 aa27.68■■■□□ 2.02
COPS7B-215ENST00000450501 PPP1R15AO75807 674 aaPredicted RBP27.66■■■□□ 2.02
COPS7B-215ENST00000450501 ZNF326Q5BKZ1 582 aaKnown RBP27.66■■■□□ 2.02
COPS7B-215ENST00000450501 ZNF335Q9H4Z2 1342 aaPredicted RBP27.62■■■□□ 2.01
COPS7B-215ENST00000450501 PLEKHG1Q9ULL1 1385 aa27.6■■■□□ 2.01
COPS7B-215ENST00000450501 LTBP4Q8N2S1 1624 aa27.59■■■□□ 2.01
COPS7B-215ENST00000450501 BCANQ96GW7 911 aa27.59■■■□□ 2.01
COPS7B-215ENST00000450501 NUTM2DQ5VT03 806 aaPredicted RBP27.58■■■□□ 2.01
COPS7B-215ENST00000450501 ANKRD30BQ9BXX2 1392 aa27.58■■■□□ 2.01
COPS7B-215ENST00000450501 NEXMIFQ5QGS0 1516 aa27.57■■■□□ 2
COPS7B-215ENST00000450501 RPGRIP1LQ68CZ1 1315 aa27.56■■■□□ 2
COPS7B-215ENST00000450501 CERKQ8TCT0 537 aa27.55■■■□□ 2
COPS7B-215ENST00000450501 SLC26A8Q96RN1 970 aa27.54■■■□□ 2
COPS7B-215ENST00000450501 SPATA31E1Q6ZUB1 1445 aa27.53■■■□□ 2
COPS7B-215ENST00000450501 CPS1P31327 1500 aa27.51■■■□□ 2
COPS7B-215ENST00000450501 PPLO60437 1756 aa27.51■■□□□ 1.99
COPS7B-215ENST00000450501 VGFO15240 615 aaPredicted RBP27.5■■□□□ 1.99
COPS7B-215ENST00000450501 DIP2AQ14689 1571 aa27.49■■□□□ 1.99
COPS7B-215ENST00000450501 RGL3Q3MIN7 710 aa27.49■■□□□ 1.99
COPS7B-215ENST00000450501 TBX22Q9Y458 520 aa27.47■■□□□ 1.99
COPS7B-215ENST00000450501 STRCP1A6NGW2 1772 aa27.47■■□□□ 1.99
COPS7B-215ENST00000450501 SETBP1Q9Y6X0 1596 aa27.47■■□□□ 1.99
COPS7B-215ENST00000450501 ADAMTS13Q76LX8 1427 aa27.46■■□□□ 1.99
COPS7B-215ENST00000450501 IQSEC2Q5JU85 1478 aa27.45■■□□□ 1.99
COPS7B-215ENST00000450501 NRXN3Q9Y4C0 1643 aa27.44■■□□□ 1.98
COPS7B-215ENST00000450501 IFT172Q9UG01 1749 aa27.44■■□□□ 1.98
COPS7B-215ENST00000450501 KCNA6P17658 529 aa27.42■■□□□ 1.98
COPS7B-215ENST00000450501 CHD2O14647 1828 aaKnown RBP27.41■■□□□ 1.98
COPS7B-215ENST00000450501 PIK3R4Q99570 1358 aa27.4■■□□□ 1.98
COPS7B-215ENST00000450501 NWD1Q149M9 1564 aa27.39■■□□□ 1.97
COPS7B-215ENST00000450501 DHX57Q6P158 1386 aaKnown RBP27.37■■□□□ 1.97
COPS7B-215ENST00000450501 PCGF6Q9BYE7 350 aa27.37■■□□□ 1.97
COPS7B-215ENST00000450501 LRRC7Q96NW7 1537 aa27.36■■□□□ 1.97
COPS7B-215ENST00000450501 FBXO41Q8TF61 875 aa27.35■■□□□ 1.97
COPS7B-215ENST00000450501 NKTRP30414 1462 aaKnown RBP27.35■■□□□ 1.97
COPS7B-215ENST00000450501 ADGRF5Q8IZF2 1346 aa27.34■■□□□ 1.97
COPS7B-215ENST00000450501 ALKQ9UM73 1620 aa27.32■■□□□ 1.96
COPS7B-215ENST00000450501 MYOM2P54296 1465 aa27.32■■□□□ 1.96
COPS7B-215ENST00000450501 SETD1AO15047 1707 aaKnown RBP27.3■■□□□ 1.96
COPS7B-215ENST00000450501 PROSER2Q86WR7 435 aaPredicted RBP27.3■■□□□ 1.96
COPS7B-215ENST00000450501 METP08581 1390 aa27.3■■□□□ 1.96
COPS7B-215ENST00000450501 PIK3C2GO75747 1445 aa27.28■■□□□ 1.96
COPS7B-215ENST00000450501 STAC3Q96MF2 364 aa27.28■■□□□ 1.96
COPS7B-215ENST00000450501 AMOTL2Q9Y2J4 779 aa27.28■■□□□ 1.96
COPS7B-215ENST00000450501 XIRP1Q702N8 1843 aaKnown RBP27.27■■□□□ 1.96
COPS7B-215ENST00000450501 PTPRUQ92729 1446 aa27.27■■□□□ 1.96
COPS7B-215ENST00000450501 NRXN1Q9ULB1 1477 aa27.26■■□□□ 1.95
COPS7B-215ENST00000450501 DCAF11Q8TEB1 546 aa27.26■■□□□ 1.95
COPS7B-215ENST00000450501 XRN1Q8IZH2 1706 aaKnown RBP27.26■■□□□ 1.95
COPS7B-215ENST00000450501 TMEM94Q12767 1356 aa27.25■■□□□ 1.95
COPS7B-215ENST00000450501 ILDR1Q86SU0 546 aaPredicted RBP27.23■■□□□ 1.95
COPS7B-215ENST00000450501 KDM2AQ9Y2K7 1162 aa27.23■■□□□ 1.95
COPS7B-215ENST00000450501 UBAP1LF5GYI3 381 aa27.22■■□□□ 1.95
COPS7B-215ENST00000450501 LAMC1P11047 1609 aa27.22■■□□□ 1.95
COPS7B-215ENST00000450501 SIN3AQ96ST3 1273 aa27.21■■□□□ 1.95
COPS7B-215ENST00000450501 TOM1O60784 492 aa27.2■■□□□ 1.94
COPS7B-215ENST00000450501 NCOA3Q9Y6Q9 1424 aa27.19■■□□□ 1.94
COPS7B-215ENST00000450501 C14orf93Q9H972 538 aaKnown RBP27.19■■□□□ 1.94
COPS7B-215ENST00000450501 NEUROD1Q13562 356 aa27.18■■□□□ 1.94
COPS7B-215ENST00000450501 RBM33Q96EV2 1170 aaKnown RBP27.18■■□□□ 1.94
COPS7B-215ENST00000450501 MSH6P52701 1360 aa27.14■■□□□ 1.94
COPS7B-215ENST00000450501 CFAP70Q5T0N1 1121 aa27.14■■□□□ 1.94
COPS7B-215ENST00000450501 C14orf37Q86TY3 774 aa27.14■■□□□ 1.94
COPS7B-215ENST00000450501 PRAG1Q86YV5 1406 aa27.14■■□□□ 1.93
COPS7B-215ENST00000450501 ASXL1Q8IXJ9 1541 aa27.13■■□□□ 1.93
COPS7B-215ENST00000450501 PTCH1Q13635 1447 aa27.13■■□□□ 1.93
COPS7B-215ENST00000450501 TMEM132EQ6IEE7 984 aa27.12■■□□□ 1.93
COPS7B-215ENST00000450501 LRPPRCP42704 1394 aaKnown RBP27.11■■□□□ 1.93
COPS7B-215ENST00000450501 L3MBTL2Q969R5 705 aa27.1■■□□□ 1.93
COPS7B-215ENST00000450501 YTHDC2Q9H6S0 1430 aaKnown RBP27.09■■□□□ 1.93
COPS7B-215ENST00000450501 KNDC1Q76NI1 1749 aa27.08■■□□□ 1.93
COPS7B-215ENST00000450501 C19orf44Q9H6X5 657 aa27.08■■□□□ 1.93
COPS7B-215ENST00000450501 STK26Q9P289 416 aa27.08■■□□□ 1.93
COPS7B-215ENST00000450501 ABCC11Q96J66 1382 aa27.08■■□□□ 1.93
COPS7B-215ENST00000450501 ROBO2Q9HCK4 1378 aa27.08■■□□□ 1.93
COPS7B-215ENST00000450501 TECPR2O15040 1411 aa27.07■■□□□ 1.92
COPS7B-215ENST00000450501 SCAF1Q9H7N4 1312 aaKnown RBP27.07■■□□□ 1.92
COPS7B-215ENST00000450501 PIP4K2BP78356 416 aa27.06■■□□□ 1.92
COPS7B-215ENST00000450501 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.06■■□□□ 1.92
COPS7B-215ENST00000450501 KIAA1210Q9ULL0 1709 aa27.04■■□□□ 1.92
COPS7B-215ENST00000450501 ADGRB1O14514 1584 aa27.04■■□□□ 1.92
COPS7B-215ENST00000450501 TONSLQ96HA7 1378 aa27.03■■□□□ 1.92
COPS7B-215ENST00000450501 ADGRL3Q9HAR2 1447 aa27.03■■□□□ 1.92
COPS7B-215ENST00000450501 DCCP43146 1447 aa27.02■■□□□ 1.92
COPS7B-215ENST00000450501 ATF3P18847 181 aa27.02■■□□□ 1.92
COPS7B-215ENST00000450501 CADPS2Q86UW7 1296 aa27.02■■□□□ 1.92
COPS7B-215ENST00000450501 NALCNQ8IZF0 1738 aa27.02■■□□□ 1.92
COPS7B-215ENST00000450501 CLSPNQ9HAW4 1339 aa27.01■■□□□ 1.91
COPS7B-215ENST00000450501 SIRT1Q96EB6 747 aa27■■□□□ 1.91
COPS7B-215ENST00000450501 FAM135BQ49AJ0 1406 aa26.99■■□□□ 1.91
COPS7B-215ENST00000450501 SLAIN2Q9P270 581 aa26.98■■□□□ 1.91
COPS7B-215ENST00000450501 DLC1Q96QB1 1528 aa26.97■■□□□ 1.91
COPS7B-215ENST00000450501 WAPLQ7Z5K2 1190 aa26.96■■□□□ 1.91
COPS7B-215ENST00000450501 CCER1Q8TC90 406 aaPredicted RBP26.93■■□□□ 1.9
COPS7B-215ENST00000450501 TRAK1Q9UPV9 953 aa26.93■■□□□ 1.9
COPS7B-215ENST00000450501 PLEKHH1Q9ULM0 1364 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms