RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 CHGAP10645 457 aaKnown RBP17.87■□□□□ 0.45
LSP1P3-201ENST00000449530 ZFYVE9O95405 1425 aa17.87■□□□□ 0.45
LSP1P3-201ENST00000449530 SETD5Q9C0A6 1442 aa17.86■□□□□ 0.45
LSP1P3-201ENST00000449530 RIMS2Q9UQ26 1411 aa17.86■□□□□ 0.45
LSP1P3-201ENST00000449530 KIF1BO60333 1816 aa17.86■□□□□ 0.45
LSP1P3-201ENST00000449530 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
LSP1P3-201ENST00000449530 SLC4A1APQ9BWU0 796 aaKnown RBP17.84■□□□□ 0.45
LSP1P3-201ENST00000449530 HSPA1LP34931 641 aa17.82■□□□□ 0.44
LSP1P3-201ENST00000449530 PPP1R15AO75807 674 aaPredicted RBP17.81■□□□□ 0.44
LSP1P3-201ENST00000449530 PIP4K2BP78356 416 aa17.81■□□□□ 0.44
LSP1P3-201ENST00000449530 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
LSP1P3-201ENST00000449530 MED1Q15648 1581 aaPredicted RBP17.8■□□□□ 0.44
LSP1P3-201ENST00000449530 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
LSP1P3-201ENST00000449530 SENP3Q9H4L4 574 aaPredicted RBP17.8■□□□□ 0.44
LSP1P3-201ENST00000449530 PLEKHG1Q9ULL1 1385 aa17.79■□□□□ 0.44
LSP1P3-201ENST00000449530 TOM1O60784 492 aa17.78■□□□□ 0.44
LSP1P3-201ENST00000449530 BCANQ96GW7 911 aa17.78■□□□□ 0.44
LSP1P3-201ENST00000449530 NWD1Q149M9 1564 aa17.78■□□□□ 0.44
LSP1P3-201ENST00000449530 FOXD1Q16676 465 aa17.77■□□□□ 0.44
LSP1P3-201ENST00000449530 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
LSP1P3-201ENST00000449530 NEXMIFQ5QGS0 1516 aa17.77■□□□□ 0.43
LSP1P3-201ENST00000449530 LRRC7Q96NW7 1537 aa17.77■□□□□ 0.43
LSP1P3-201ENST00000449530 DIP2AQ14689 1571 aa17.76■□□□□ 0.43
LSP1P3-201ENST00000449530 SLC26A8Q96RN1 970 aa17.76■□□□□ 0.43
LSP1P3-201ENST00000449530 XIRP1Q702N8 1843 aaKnown RBP17.75■□□□□ 0.43
LSP1P3-201ENST00000449530 HDGFP51858 240 aaKnown RBP17.75■□□□□ 0.43
LSP1P3-201ENST00000449530 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.75■□□□□ 0.43
LSP1P3-201ENST00000449530 MPHOSPH9Q99550 1183 aa17.75■□□□□ 0.43
LSP1P3-201ENST00000449530 NRXN3Q9Y4C0 1643 aa17.75■□□□□ 0.43
LSP1P3-201ENST00000449530 ZNF326Q5BKZ1 582 aaKnown RBP17.74■□□□□ 0.43
LSP1P3-201ENST00000449530 CHD2O14647 1828 aaKnown RBP17.73■□□□□ 0.43
LSP1P3-201ENST00000449530 PPLO60437 1756 aa17.73■□□□□ 0.43
LSP1P3-201ENST00000449530 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
LSP1P3-201ENST00000449530 CCDC144AA2RUR9 1427 aa17.72■□□□□ 0.43
LSP1P3-201ENST00000449530 SETBP1Q9Y6X0 1596 aa17.72■□□□□ 0.43
LSP1P3-201ENST00000449530 ADAMTS13Q76LX8 1427 aa17.72■□□□□ 0.43
LSP1P3-201ENST00000449530 NKTRP30414 1462 aaKnown RBP17.71■□□□□ 0.43
LSP1P3-201ENST00000449530 IFT172Q9UG01 1749 aa17.69■□□□□ 0.42
LSP1P3-201ENST00000449530 ALKQ9UM73 1620 aa17.69■□□□□ 0.42
LSP1P3-201ENST00000449530 KCNA6P17658 529 aa17.67■□□□□ 0.42
LSP1P3-201ENST00000449530 SETD1AO15047 1707 aaKnown RBP17.65■□□□□ 0.42
LSP1P3-201ENST00000449530 XRN1Q8IZH2 1706 aaKnown RBP17.65■□□□□ 0.42
LSP1P3-201ENST00000449530 TBX22Q9Y458 520 aa17.65■□□□□ 0.42
LSP1P3-201ENST00000449530 TMEM94Q12767 1356 aa17.65■□□□□ 0.42
LSP1P3-201ENST00000449530 SPATA31E1Q6ZUB1 1445 aa17.64■□□□□ 0.42
LSP1P3-201ENST00000449530 PIK3R4Q99570 1358 aa17.62■□□□□ 0.41
LSP1P3-201ENST00000449530 PROSER2Q86WR7 435 aaPredicted RBP17.61■□□□□ 0.41
LSP1P3-201ENST00000449530 RBM33Q96EV2 1170 aaKnown RBP17.61■□□□□ 0.41
LSP1P3-201ENST00000449530 RPGRIP1LQ68CZ1 1315 aa17.61■□□□□ 0.41
LSP1P3-201ENST00000449530 PTPRUQ92729 1446 aa17.61■□□□□ 0.41
LSP1P3-201ENST00000449530 HRCP23327 699 aa17.59■□□□□ 0.41
LSP1P3-201ENST00000449530 METP08581 1390 aa17.58■□□□□ 0.4
LSP1P3-201ENST00000449530 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.4
LSP1P3-201ENST00000449530 RGL3Q3MIN7 710 aa17.58■□□□□ 0.4
LSP1P3-201ENST00000449530 ANKRD30BQ9BXX2 1392 aa17.57■□□□□ 0.4
LSP1P3-201ENST00000449530 MSH6P52701 1360 aa17.55■□□□□ 0.4
LSP1P3-201ENST00000449530 AMOTL2Q9Y2J4 779 aa17.55■□□□□ 0.4
LSP1P3-201ENST00000449530 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.54■□□□□ 0.4
LSP1P3-201ENST00000449530 ADGRF5Q8IZF2 1346 aa17.53■□□□□ 0.4
LSP1P3-201ENST00000449530 ROBO1Q9Y6N7 1651 aa17.53■□□□□ 0.4
LSP1P3-201ENST00000449530 MYOM2P54296 1465 aa17.53■□□□□ 0.4
LSP1P3-201ENST00000449530 NALCNQ8IZF0 1738 aa17.52■□□□□ 0.4
LSP1P3-201ENST00000449530 LAMC1P11047 1609 aa17.52■□□□□ 0.4
LSP1P3-201ENST00000449530 C14orf37Q86TY3 774 aa17.52■□□□□ 0.4
LSP1P3-201ENST00000449530 PIK3C2GO75747 1445 aa17.52■□□□□ 0.4
LSP1P3-201ENST00000449530 RGS17Q9UGC6 210 aaPredicted RBP17.51■□□□□ 0.39
LSP1P3-201ENST00000449530 NCOA3Q9Y6Q9 1424 aa17.51■□□□□ 0.39
LSP1P3-201ENST00000449530 ASXL1Q8IXJ9 1541 aa17.51■□□□□ 0.39
LSP1P3-201ENST00000449530 PTCH1Q13635 1447 aa17.49■□□□□ 0.39
LSP1P3-201ENST00000449530 KNDC1Q76NI1 1749 aa17.49■□□□□ 0.39
LSP1P3-201ENST00000449530 NRXN1Q9ULB1 1477 aa17.49■□□□□ 0.39
LSP1P3-201ENST00000449530 PRAG1Q86YV5 1406 aa17.47■□□□□ 0.39
LSP1P3-201ENST00000449530 ADGRL3Q9HAR2 1447 aa17.47■□□□□ 0.39
LSP1P3-201ENST00000449530 ROBO2Q9HCK4 1378 aa17.45■□□□□ 0.38
LSP1P3-201ENST00000449530 DCCP43146 1447 aa17.45■□□□□ 0.38
LSP1P3-201ENST00000449530 FAM135BQ49AJ0 1406 aa17.45■□□□□ 0.38
LSP1P3-201ENST00000449530 C19orf44Q9H6X5 657 aa17.43■□□□□ 0.38
LSP1P3-201ENST00000449530 PHLPP1O60346 1717 aa17.43■□□□□ 0.38
LSP1P3-201ENST00000449530 ATF3P18847 181 aa17.42■□□□□ 0.38
LSP1P3-201ENST00000449530 TRIM26Q12899 539 aaPredicted RBP17.42■□□□□ 0.38
LSP1P3-201ENST00000449530 TECPR2O15040 1411 aa17.41■□□□□ 0.38
LSP1P3-201ENST00000449530 CADPS2Q86UW7 1296 aa17.41■□□□□ 0.38
LSP1P3-201ENST00000449530 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
LSP1P3-201ENST00000449530 LRPPRCP42704 1394 aaKnown RBP17.4■□□□□ 0.38
LSP1P3-201ENST00000449530 YTHDC2Q9H6S0 1430 aaKnown RBP17.4■□□□□ 0.38
LSP1P3-201ENST00000449530 STK26Q9P289 416 aa17.4■□□□□ 0.38
LSP1P3-201ENST00000449530 DHX57Q6P158 1386 aaKnown RBP17.4■□□□□ 0.38
LSP1P3-201ENST00000449530 MST1RQ04912 1400 aa17.39■□□□□ 0.38
LSP1P3-201ENST00000449530 TMEM132EQ6IEE7 984 aa17.39■□□□□ 0.37
LSP1P3-201ENST00000449530 POTEAQ6S8J7 498 aa17.39■□□□□ 0.37
LSP1P3-201ENST00000449530 DCAF11Q8TEB1 546 aa17.39■□□□□ 0.37
LSP1P3-201ENST00000449530 CDC42BPGQ6DT37 1551 aa17.38■□□□□ 0.37
LSP1P3-201ENST00000449530 CFAP70Q5T0N1 1121 aa17.38■□□□□ 0.37
LSP1P3-201ENST00000449530 KDM2AQ9Y2K7 1162 aa17.38■□□□□ 0.37
LSP1P3-201ENST00000449530 ADGRB1O14514 1584 aa17.37■□□□□ 0.37
LSP1P3-201ENST00000449530 COL16A1Q07092 1604 aaPredicted RBP17.37■□□□□ 0.37
LSP1P3-201ENST00000449530 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
LSP1P3-201ENST00000449530 AHDC1Q5TGY3 1603 aaPredicted RBP17.36■□□□□ 0.37
LSP1P3-201ENST00000449530 ABCC11Q96J66 1382 aa17.36■□□□□ 0.37
LSP1P3-201ENST00000449530 NHSL1Q5SYE7 1610 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms