RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 PPP1R15AO75807 674 aaPredicted RBP26.82■■□□□ 1.88
RFTN1-205ENST00000449415 NUTM2DQ5VT03 806 aaPredicted RBP26.82■■□□□ 1.88
RFTN1-205ENST00000449415 IQSEC2Q5JU85 1478 aa26.81■■□□□ 1.88
RFTN1-205ENST00000449415 TRPM2O94759 1503 aa26.81■■□□□ 1.88
RFTN1-205ENST00000449415 CPS1P31327 1500 aa26.81■■□□□ 1.88
RFTN1-205ENST00000449415 FOXD1Q16676 465 aa26.79■■□□□ 1.88
RFTN1-205ENST00000449415 SLC26A8Q96RN1 970 aa26.79■■□□□ 1.88
RFTN1-205ENST00000449415 HDGFP51858 240 aaKnown RBP26.78■■□□□ 1.88
RFTN1-205ENST00000449415 KIF1BO60333 1816 aa26.78■■□□□ 1.88
RFTN1-205ENST00000449415 RAB3GAP2Q9H2M9 1393 aa26.75■■□□□ 1.87
RFTN1-205ENST00000449415 ZNF326Q5BKZ1 582 aaKnown RBP26.75■■□□□ 1.87
RFTN1-205ENST00000449415 MPHOSPH9Q99550 1183 aa26.75■■□□□ 1.87
RFTN1-205ENST00000449415 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.74■■□□□ 1.87
RFTN1-205ENST00000449415 PLEKHG1Q9ULL1 1385 aa26.73■■□□□ 1.87
RFTN1-205ENST00000449415 UBAP1LF5GYI3 381 aa26.71■■□□□ 1.87
RFTN1-205ENST00000449415 LRRC7Q96NW7 1537 aa26.7■■□□□ 1.86
RFTN1-205ENST00000449415 ACIN1Q9UKV3 1341 aaKnown RBP26.65■■□□□ 1.86
RFTN1-205ENST00000449415 KCNA6P17658 529 aa26.64■■□□□ 1.86
RFTN1-205ENST00000449415 XIRP1Q702N8 1843 aaKnown RBP26.64■■□□□ 1.85
RFTN1-205ENST00000449415 NEXMIFQ5QGS0 1516 aa26.63■■□□□ 1.85
RFTN1-205ENST00000449415 CHD2O14647 1828 aaKnown RBP26.62■■□□□ 1.85
RFTN1-205ENST00000449415 ADAMTS13Q76LX8 1427 aa26.62■■□□□ 1.85
RFTN1-205ENST00000449415 CCDC144AA2RUR9 1427 aa26.61■■□□□ 1.85
RFTN1-205ENST00000449415 TBX22Q9Y458 520 aa26.6■■□□□ 1.85
RFTN1-205ENST00000449415 SCAF1Q9H7N4 1312 aaKnown RBP26.6■■□□□ 1.85
RFTN1-205ENST00000449415 NWD1Q149M9 1564 aa26.59■■□□□ 1.85
RFTN1-205ENST00000449415 RBM33Q96EV2 1170 aaKnown RBP26.59■■□□□ 1.85
RFTN1-205ENST00000449415 DIP2AQ14689 1571 aa26.58■■□□□ 1.85
RFTN1-205ENST00000449415 NRXN3Q9Y4C0 1643 aa26.58■■□□□ 1.85
RFTN1-205ENST00000449415 TOM1O60784 492 aa26.58■■□□□ 1.85
RFTN1-205ENST00000449415 PIP4K2BP78356 416 aa26.58■■□□□ 1.85
RFTN1-205ENST00000449415 PROSER2Q86WR7 435 aaPredicted RBP26.58■■□□□ 1.85
RFTN1-205ENST00000449415 PPLO60437 1756 aa26.55■■□□□ 1.84
RFTN1-205ENST00000449415 TMEM94Q12767 1356 aa26.55■■□□□ 1.84
RFTN1-205ENST00000449415 SETBP1Q9Y6X0 1596 aa26.54■■□□□ 1.84
RFTN1-205ENST00000449415 RGL3Q3MIN7 710 aa26.54■■□□□ 1.84
RFTN1-205ENST00000449415 NKTRP30414 1462 aaKnown RBP26.54■■□□□ 1.84
RFTN1-205ENST00000449415 ALKQ9UM73 1620 aa26.54■■□□□ 1.84
RFTN1-205ENST00000449415 RPGRIP1LQ68CZ1 1315 aa26.5■■□□□ 1.83
RFTN1-205ENST00000449415 VGFO15240 615 aaPredicted RBP26.5■■□□□ 1.83
RFTN1-205ENST00000449415 HRCP23327 699 aa26.5■■□□□ 1.83
RFTN1-205ENST00000449415 SPATA31E1Q6ZUB1 1445 aa26.48■■□□□ 1.83
RFTN1-205ENST00000449415 PIK3R4Q99570 1358 aa26.48■■□□□ 1.83
RFTN1-205ENST00000449415 PTPRUQ92729 1446 aa26.48■■□□□ 1.83
RFTN1-205ENST00000449415 AMOTL2Q9Y2J4 779 aa26.47■■□□□ 1.83
RFTN1-205ENST00000449415 METP08581 1390 aa26.46■■□□□ 1.83
RFTN1-205ENST00000449415 IFT172Q9UG01 1749 aa26.45■■□□□ 1.83
RFTN1-205ENST00000449415 SETD1AO15047 1707 aaKnown RBP26.42■■□□□ 1.82
RFTN1-205ENST00000449415 XRN1Q8IZH2 1706 aaKnown RBP26.42■■□□□ 1.82
RFTN1-205ENST00000449415 C14orf37Q86TY3 774 aa26.41■■□□□ 1.82
RFTN1-205ENST00000449415 ANKRD30BQ9BXX2 1392 aa26.41■■□□□ 1.82
RFTN1-205ENST00000449415 ADGRF5Q8IZF2 1346 aa26.4■■□□□ 1.82
RFTN1-205ENST00000449415 MSH6P52701 1360 aa26.4■■□□□ 1.82
RFTN1-205ENST00000449415 HSPA1LP34931 641 aa26.39■■□□□ 1.82
RFTN1-205ENST00000449415 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.34■■□□□ 1.81
RFTN1-205ENST00000449415 NCOA3Q9Y6Q9 1424 aa26.32■■□□□ 1.8
RFTN1-205ENST00000449415 ROBO1Q9Y6N7 1651 aa26.29■■□□□ 1.8
RFTN1-205ENST00000449415 C19orf44Q9H6X5 657 aa26.29■■□□□ 1.8
RFTN1-205ENST00000449415 PIK3C2GO75747 1445 aa26.28■■□□□ 1.8
RFTN1-205ENST00000449415 SLAIN2Q9P270 581 aa26.27■■□□□ 1.8
RFTN1-205ENST00000449415 ATF3P18847 181 aa26.26■■□□□ 1.79
RFTN1-205ENST00000449415 MYOM2P54296 1465 aa26.25■■□□□ 1.79
RFTN1-205ENST00000449415 FAM135BQ49AJ0 1406 aa26.25■■□□□ 1.79
RFTN1-205ENST00000449415 ROBO2Q9HCK4 1378 aa26.24■■□□□ 1.79
RFTN1-205ENST00000449415 TRIM26Q12899 539 aaPredicted RBP26.24■■□□□ 1.79
RFTN1-205ENST00000449415 TMEM132EQ6IEE7 984 aa26.24■■□□□ 1.79
RFTN1-205ENST00000449415 STK26Q9P289 416 aa26.24■■□□□ 1.79
RFTN1-205ENST00000449415 KDM2AQ9Y2K7 1162 aa26.24■■□□□ 1.79
RFTN1-205ENST00000449415 NALCNQ8IZF0 1738 aa26.24■■□□□ 1.79
RFTN1-205ENST00000449415 CADPS2Q86UW7 1296 aa26.23■■□□□ 1.79
RFTN1-205ENST00000449415 ASXL1Q8IXJ9 1541 aa26.23■■□□□ 1.79
RFTN1-205ENST00000449415 DCAF11Q8TEB1 546 aa26.22■■□□□ 1.79
RFTN1-205ENST00000449415 PTCH1Q13635 1447 aa26.22■■□□□ 1.79
RFTN1-205ENST00000449415 NRXN1Q9ULB1 1477 aa26.21■■□□□ 1.79
RFTN1-205ENST00000449415 CFAP70Q5T0N1 1121 aa26.2■■□□□ 1.78
RFTN1-205ENST00000449415 ADGRL3Q9HAR2 1447 aa26.2■■□□□ 1.78
RFTN1-205ENST00000449415 C14orf93Q9H972 538 aaKnown RBP26.18■■□□□ 1.78
RFTN1-205ENST00000449415 LAMC1P11047 1609 aa26.17■■□□□ 1.78
RFTN1-205ENST00000449415 LRPPRCP42704 1394 aaKnown RBP26.17■■□□□ 1.78
RFTN1-205ENST00000449415 DCCP43146 1447 aa26.16■■□□□ 1.78
RFTN1-205ENST00000449415 PRAG1Q86YV5 1406 aa26.16■■□□□ 1.78
RFTN1-205ENST00000449415 DHX57Q6P158 1386 aaKnown RBP26.16■■□□□ 1.78
RFTN1-205ENST00000449415 DISP3Q9P2K9 1392 aa26.16■■□□□ 1.78
RFTN1-205ENST00000449415 PHLPP1O60346 1717 aa26.15■■□□□ 1.78
RFTN1-205ENST00000449415 KNDC1Q76NI1 1749 aa26.15■■□□□ 1.78
RFTN1-205ENST00000449415 YTHDC2Q9H6S0 1430 aaKnown RBP26.14■■□□□ 1.78
RFTN1-205ENST00000449415 WAPLQ7Z5K2 1190 aa26.13■■□□□ 1.77
RFTN1-205ENST00000449415 MST1RQ04912 1400 aa26.12■■□□□ 1.77
RFTN1-205ENST00000449415 ABCC11Q96J66 1382 aa26.11■■□□□ 1.77
RFTN1-205ENST00000449415 TECPR2O15040 1411 aa26.11■■□□□ 1.77
RFTN1-205ENST00000449415 PLEKHH1Q9ULM0 1364 aa26.09■■□□□ 1.77
RFTN1-205ENST00000449415 SIN3AQ96ST3 1273 aa26.09■■□□□ 1.77
RFTN1-205ENST00000449415 BRINP3Q76B58 766 aa26.08■■□□□ 1.77
RFTN1-205ENST00000449415 MED1Q15648 1581 aaPredicted RBP26.07■■□□□ 1.76
RFTN1-205ENST00000449415 STAC3Q96MF2 364 aa26.06■■□□□ 1.76
RFTN1-205ENST00000449415 NEUROD1Q13562 356 aa26.05■■□□□ 1.76
RFTN1-205ENST00000449415 ADGRB1O14514 1584 aa26.04■■□□□ 1.76
RFTN1-205ENST00000449415 COL16A1Q07092 1604 aaPredicted RBP26.03■■□□□ 1.76
RFTN1-205ENST00000449415 C1orf167Q5SNV9 1468 aa26.03■■□□□ 1.76
RFTN1-205ENST00000449415 AHDC1Q5TGY3 1603 aaPredicted RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms