RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 ALKQ9UM73 1620 aa15.71■□□□□ 0.11
SMPD4-211ENST00000449159 NPHP4O75161 1426 aaPredicted RBP15.7■□□□□ 0.1
SMPD4-211ENST00000449159 THEMISQ8N1K5 641 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-211ENST00000449159 ARHGAP23Q9P227 1491 aa15.69■□□□□ 0.1
SMPD4-211ENST00000449159 SLIT1O75093 1534 aa15.68■□□□□ 0.1
SMPD4-211ENST00000449159 STAG3Q9UJ98 1225 aa15.68■□□□□ 0.1
SMPD4-211ENST00000449159 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
SMPD4-211ENST00000449159 ANKRD30BQ9BXX2 1392 aa15.67■□□□□ 0.1
SMPD4-211ENST00000449159 CHGAP10645 457 aaKnown RBP15.67■□□□□ 0.1
SMPD4-211ENST00000449159 CCDC144AA2RUR9 1427 aa15.67■□□□□ 0.1
SMPD4-211ENST00000449159 TMEM2Q9UHN6 1383 aa15.66■□□□□ 0.1
SMPD4-211ENST00000449159 DHX57Q6P158 1386 aaKnown RBP15.65■□□□□ 0.1
SMPD4-211ENST00000449159 ANKLE2Q86XL3 938 aa15.65■□□□□ 0.1
SMPD4-211ENST00000449159 XIRP1Q702N8 1843 aaKnown RBP15.65■□□□□ 0.1
SMPD4-211ENST00000449159 ZFYVE9O95405 1425 aa15.65■□□□□ 0.1
SMPD4-211ENST00000449159 TOM1O60784 492 aa15.64■□□□□ 0.09
SMPD4-211ENST00000449159 SCAF11Q99590 1463 aaKnown RBP15.64■□□□□ 0.09
SMPD4-211ENST00000449159 PIP4K2BP78356 416 aa15.63■□□□□ 0.09
SMPD4-211ENST00000449159 NEXMIFQ5QGS0 1516 aa15.63■□□□□ 0.09
SMPD4-211ENST00000449159 RIMS2Q9UQ26 1411 aa15.62■□□□□ 0.09
SMPD4-211ENST00000449159 LTKP29376 864 aa15.62■□□□□ 0.09
SMPD4-211ENST00000449159 HSPA1LP34931 641 aa15.62■□□□□ 0.09
SMPD4-211ENST00000449159 LRRC7Q96NW7 1537 aa15.62■□□□□ 0.09
SMPD4-211ENST00000449159 PPLO60437 1756 aa15.62■□□□□ 0.09
SMPD4-211ENST00000449159 SPATA31E1Q6ZUB1 1445 aa15.61■□□□□ 0.09
SMPD4-211ENST00000449159 IFT172Q9UG01 1749 aa15.61■□□□□ 0.09
SMPD4-211ENST00000449159 ZNF326Q5BKZ1 582 aaKnown RBP15.59■□□□□ 0.09
SMPD4-211ENST00000449159 NUTM2DQ5VT03 806 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-211ENST00000449159 TXNDC2Q86VQ3 553 aa15.59■□□□□ 0.09
SMPD4-211ENST00000449159 SENP3Q9H4L4 574 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-211ENST00000449159 EID1Q9Y6B2 187 aa15.57■□□□□ 0.08
SMPD4-211ENST00000449159 NRXN3Q9Y4C0 1643 aa15.56■□□□□ 0.08
SMPD4-211ENST00000449159 RGL3Q3MIN7 710 aa15.55■□□□□ 0.08
SMPD4-211ENST00000449159 PPP1R15AO75807 674 aaPredicted RBP15.54■□□□□ 0.08
SMPD4-211ENST00000449159 PLEKHG1Q9ULL1 1385 aa15.53■□□□□ 0.08
SMPD4-211ENST00000449159 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.52■□□□□ 0.08
SMPD4-211ENST00000449159 SIN3AQ96ST3 1273 aa15.52■□□□□ 0.08
SMPD4-211ENST00000449159 PHF23Q9BUL5 403 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-211ENST00000449159 SETBP1Q9Y6X0 1596 aa15.52■□□□□ 0.07
SMPD4-211ENST00000449159 SETD1AO15047 1707 aaKnown RBP15.51■□□□□ 0.07
SMPD4-211ENST00000449159 NWD1Q149M9 1564 aa15.5■□□□□ 0.07
SMPD4-211ENST00000449159 RPGRIP1LQ68CZ1 1315 aa15.5■□□□□ 0.07
SMPD4-211ENST00000449159 HDGFP51858 240 aaKnown RBP15.5■□□□□ 0.07
SMPD4-211ENST00000449159 SLC26A8Q96RN1 970 aa15.5■□□□□ 0.07
SMPD4-211ENST00000449159 ROBO1Q9Y6N7 1651 aa15.5■□□□□ 0.07
SMPD4-211ENST00000449159 ADAMTS13Q76LX8 1427 aa15.5■□□□□ 0.07
SMPD4-211ENST00000449159 DIP2AQ14689 1571 aa15.49■□□□□ 0.07
SMPD4-211ENST00000449159 MYOM2P54296 1465 aa15.48■□□□□ 0.07
SMPD4-211ENST00000449159 BCANQ96GW7 911 aa15.48■□□□□ 0.07
SMPD4-211ENST00000449159 ADGRF5Q8IZF2 1346 aa15.47■□□□□ 0.07
SMPD4-211ENST00000449159 NEUROD1Q13562 356 aa15.47■□□□□ 0.07
SMPD4-211ENST00000449159 NKTRP30414 1462 aaKnown RBP15.46■□□□□ 0.07
SMPD4-211ENST00000449159 NRXN1Q9ULB1 1477 aa15.46■□□□□ 0.07
SMPD4-211ENST00000449159 CHD2O14647 1828 aaKnown RBP15.46■□□□□ 0.07
SMPD4-211ENST00000449159 VGFO15240 615 aaPredicted RBP15.46■□□□□ 0.07
SMPD4-211ENST00000449159 PIK3C2GO75747 1445 aa15.45■□□□□ 0.06
SMPD4-211ENST00000449159 DCAF11Q8TEB1 546 aa15.43■□□□□ 0.06
SMPD4-211ENST00000449159 PHLPP1O60346 1717 aa15.43■□□□□ 0.06
SMPD4-211ENST00000449159 ASXL1Q8IXJ9 1541 aa15.43■□□□□ 0.06
SMPD4-211ENST00000449159 KDM2AQ9Y2K7 1162 aa15.42■□□□□ 0.06
SMPD4-211ENST00000449159 XRN1Q8IZH2 1706 aaKnown RBP15.42■□□□□ 0.06
SMPD4-211ENST00000449159 METP08581 1390 aa15.41■□□□□ 0.06
SMPD4-211ENST00000449159 TBX22Q9Y458 520 aa15.41■□□□□ 0.06
SMPD4-211ENST00000449159 LAMC1P11047 1609 aa15.41■□□□□ 0.06
SMPD4-211ENST00000449159 PTPRUQ92729 1446 aa15.41■□□□□ 0.06
SMPD4-211ENST00000449159 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
SMPD4-211ENST00000449159 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
SMPD4-211ENST00000449159 FAM135BQ49AJ0 1406 aa15.39■□□□□ 0.05
SMPD4-211ENST00000449159 TMEM94Q12767 1356 aa15.38■□□□□ 0.05
SMPD4-211ENST00000449159 PIK3R4Q99570 1358 aa15.37■□□□□ 0.05
SMPD4-211ENST00000449159 PRAG1Q86YV5 1406 aa15.37■□□□□ 0.05
SMPD4-211ENST00000449159 KCNA6P17658 529 aa15.37■□□□□ 0.05
SMPD4-211ENST00000449159 CLSPNQ9HAW4 1339 aa15.37■□□□□ 0.05
SMPD4-211ENST00000449159 TONSLQ96HA7 1378 aa15.36■□□□□ 0.05
SMPD4-211ENST00000449159 CFAP70Q5T0N1 1121 aa15.36■□□□□ 0.05
SMPD4-211ENST00000449159 KIAA1210Q9ULL0 1709 aa15.36■□□□□ 0.05
SMPD4-211ENST00000449159 ADGRB1O14514 1584 aa15.35■□□□□ 0.05
SMPD4-211ENST00000449159 COL16A1Q07092 1604 aaPredicted RBP15.35■□□□□ 0.05
SMPD4-211ENST00000449159 TMEM132EQ6IEE7 984 aa15.34■□□□□ 0.05
SMPD4-211ENST00000449159 C14orf93Q9H972 538 aaKnown RBP15.34■□□□□ 0.05
SMPD4-211ENST00000449159 TRPM1Q7Z4N2 1603 aa15.34■□□□□ 0.05
SMPD4-211ENST00000449159 KNDC1Q76NI1 1749 aa15.34■□□□□ 0.05
SMPD4-211ENST00000449159 RBM33Q96EV2 1170 aaKnown RBP15.33■□□□□ 0.04
SMPD4-211ENST00000449159 STAC3Q96MF2 364 aa15.33■□□□□ 0.04
SMPD4-211ENST00000449159 AMOTL2Q9Y2J4 779 aa15.33■□□□□ 0.04
SMPD4-211ENST00000449159 MSH6P52701 1360 aa15.32■□□□□ 0.04
SMPD4-211ENST00000449159 SHPRHQ149N8 1683 aa15.32■□□□□ 0.04
SMPD4-211ENST00000449159 YTHDC2Q9H6S0 1430 aaKnown RBP15.31■□□□□ 0.04
SMPD4-211ENST00000449159 NALCNQ8IZF0 1738 aa15.3■□□□□ 0.04
SMPD4-211ENST00000449159 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-211ENST00000449159 TECPR2O15040 1411 aa15.29■□□□□ 0.04
SMPD4-211ENST00000449159 PTCH1Q13635 1447 aa15.29■□□□□ 0.04
SMPD4-211ENST00000449159 LRPPRCP42704 1394 aaKnown RBP15.29■□□□□ 0.04
SMPD4-211ENST00000449159 ROBO2Q9HCK4 1378 aa15.29■□□□□ 0.04
SMPD4-211ENST00000449159 NBPF8Q3BBV2 869 aa15.29■□□□□ 0.04
SMPD4-211ENST00000449159 PROSER2Q86WR7 435 aaPredicted RBP15.29■□□□□ 0.04
SMPD4-211ENST00000449159 STK26Q9P289 416 aa15.29■□□□□ 0.04
SMPD4-211ENST00000449159 RGS17Q9UGC6 210 aaPredicted RBP15.29■□□□□ 0.04
SMPD4-211ENST00000449159 ARHGEF28Q8N1W1 1705 aaKnown RBP15.29■□□□□ 0.04
SMPD4-211ENST00000449159 NBPF1Q3BBV0 1214 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms