RNA–Protein interactions for RNA: ENST00000448828.5

NME4-206, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 2

Gene NME4, Length 1,167 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-206ENST00000448828 SLC26A8Q96RN1 970 aa34.31■■■■□ 3.08
NME4-206ENST00000448828 RIMS2Q9UQ26 1411 aa34.3■■■■□ 3.08
NME4-206ENST00000448828 ZFYVE9O95405 1425 aa34.27■■■■□ 3.08
NME4-206ENST00000448828 HDGFP51858 240 aaKnown RBP34.26■■■■□ 3.08
NME4-206ENST00000448828 SPHKAPQ2M3C7 1700 aa34.26■■■■□ 3.07
NME4-206ENST00000448828 HFM1A2PYH4 1435 aa34.23■■■■□ 3.07
NME4-206ENST00000448828 NUTM2DQ5VT03 806 aaPredicted RBP34.21■■■■□ 3.07
NME4-206ENST00000448828 TRIM52Q96A61 297 aa34.21■■■■□ 3.07
NME4-206ENST00000448828 PLEKHG1Q9ULL1 1385 aa34.21■■■■□ 3.07
NME4-206ENST00000448828 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.19■■■■□ 3.06
NME4-206ENST00000448828 DISP3Q9P2K9 1392 aa34.19■■■■□ 3.06
NME4-206ENST00000448828 ALKQ9UM73 1620 aa34.17■■■■□ 3.06
NME4-206ENST00000448828 KCNA6P17658 529 aa34.16■■■■□ 3.06
NME4-206ENST00000448828 XIRP1Q702N8 1843 aaKnown RBP34.14■■■■□ 3.06
NME4-206ENST00000448828 HSPA1LP34931 641 aa34.14■■■■□ 3.06
NME4-206ENST00000448828 NWD1Q149M9 1564 aa34.12■■■■□ 3.05
NME4-206ENST00000448828 TMEM94Q12767 1356 aa34.11■■■■□ 3.05
NME4-206ENST00000448828 PROSER2Q86WR7 435 aaPredicted RBP34.11■■■■□ 3.05
NME4-206ENST00000448828 NKTRP30414 1462 aaKnown RBP34.1■■■■□ 3.05
NME4-206ENST00000448828 ZNF326Q5BKZ1 582 aaKnown RBP34.1■■■■□ 3.05
NME4-206ENST00000448828 CLTCL1P53675 1640 aa34.09■■■■□ 3.05
NME4-206ENST00000448828 RBM33Q96EV2 1170 aaKnown RBP34.09■■■■□ 3.05
NME4-206ENST00000448828 TRPM2O94759 1503 aa34.09■■■■□ 3.05
NME4-206ENST00000448828 SLC4A1APQ9BWU0 796 aaKnown RBP34.05■■■■□ 3.04
NME4-206ENST00000448828 DIP2AQ14689 1571 aa34.04■■■■□ 3.04
NME4-206ENST00000448828 CHD2O14647 1828 aaKnown RBP34.02■■■■□ 3.04
NME4-206ENST00000448828 TBX22Q9Y458 520 aa34.01■■■■□ 3.03
NME4-206ENST00000448828 ADAMTS13Q76LX8 1427 aa34.01■■■■□ 3.03
NME4-206ENST00000448828 KIF1BO60333 1816 aa34■■■■□ 3.03
NME4-206ENST00000448828 MSH6P52701 1360 aa33.96■■■■□ 3.03
NME4-206ENST00000448828 C14orf37Q86TY3 774 aa33.92■■■■□ 3.02
NME4-206ENST00000448828 NEXMIFQ5QGS0 1516 aa33.91■■■■□ 3.02
NME4-206ENST00000448828 SETBP1Q9Y6X0 1596 aa33.9■■■■□ 3.02
NME4-206ENST00000448828 PIK3R4Q99570 1358 aa33.9■■■■□ 3.02
NME4-206ENST00000448828 NRXN3Q9Y4C0 1643 aa33.9■■■■□ 3.02
NME4-206ENST00000448828 FOXD1Q16676 465 aa33.89■■■■□ 3.02
NME4-206ENST00000448828 MED1Q15648 1581 aaPredicted RBP33.87■■■■□ 3.01
NME4-206ENST00000448828 ROBO1Q9Y6N7 1651 aa33.85■■■■□ 3.01
NME4-206ENST00000448828 AMOTL2Q9Y2J4 779 aa33.84■■■■□ 3.01
NME4-206ENST00000448828 FAM135BQ49AJ0 1406 aa33.83■■■■□ 3.01
NME4-206ENST00000448828 PTPRUQ92729 1446 aa33.82■■■■□ 3
NME4-206ENST00000448828 ILDR2Q71H61 639 aa33.82■■■■□ 3
NME4-206ENST00000448828 MPHOSPH9Q99550 1183 aa33.8■■■■□ 3
NME4-206ENST00000448828 SETD5Q9C0A6 1442 aa33.79■■■■□ 3
NME4-206ENST00000448828 CCDC144AA2RUR9 1427 aa33.79■■■■□ 3
NME4-206ENST00000448828 NCOA3Q9Y6Q9 1424 aa33.78■■■■□ 3
NME4-206ENST00000448828 METP08581 1390 aa33.77■■■■□ 3
NME4-206ENST00000448828 XRN1Q8IZH2 1706 aaKnown RBP33.77■■■■□ 3
NME4-206ENST00000448828 SLAIN2Q9P270 581 aa33.76■■■□□ 2.99
NME4-206ENST00000448828 VGFO15240 615 aaPredicted RBP33.75■■■□□ 2.99
NME4-206ENST00000448828 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.73■■■□□ 2.99
NME4-206ENST00000448828 ATF3P18847 181 aa33.72■■■□□ 2.99
NME4-206ENST00000448828 PHF23Q9BUL5 403 aaPredicted RBP33.72■■■□□ 2.99
NME4-206ENST00000448828 RPGRIP1LQ68CZ1 1315 aa33.72■■■□□ 2.99
NME4-206ENST00000448828 PPLO60437 1756 aa33.72■■■□□ 2.99
NME4-206ENST00000448828 C19orf44Q9H6X5 657 aa33.7■■■□□ 2.99
NME4-206ENST00000448828 CADPS2Q86UW7 1296 aa33.69■■■□□ 2.98
NME4-206ENST00000448828 ACIN1Q9UKV3 1341 aaKnown RBP33.69■■■□□ 2.98
NME4-206ENST00000448828 RAB3GAP2Q9H2M9 1393 aa33.69■■■□□ 2.98
NME4-206ENST00000448828 RGL3Q3MIN7 710 aa33.67■■■□□ 2.98
NME4-206ENST00000448828 PHLPP1O60346 1717 aa33.66■■■□□ 2.98
NME4-206ENST00000448828 SETD1AO15047 1707 aaKnown RBP33.63■■■□□ 2.97
NME4-206ENST00000448828 DCCP43146 1447 aa33.59■■■□□ 2.97
NME4-206ENST00000448828 SPATA31E1Q6ZUB1 1445 aa33.59■■■□□ 2.97
NME4-206ENST00000448828 NALCNQ8IZF0 1738 aa33.56■■■□□ 2.96
NME4-206ENST00000448828 ADGRL3Q9HAR2 1447 aa33.55■■■□□ 2.96
NME4-206ENST00000448828 IFT172Q9UG01 1749 aa33.55■■■□□ 2.96
NME4-206ENST00000448828 ADGRF5Q8IZF2 1346 aa33.54■■■□□ 2.96
NME4-206ENST00000448828 ANKRD30BQ9BXX2 1392 aa33.54■■■□□ 2.96
NME4-206ENST00000448828 PTCH1Q13635 1447 aa33.53■■■□□ 2.96
NME4-206ENST00000448828 SOCS7O14512 581 aa33.53■■■□□ 2.96
NME4-206ENST00000448828 COL16A1Q07092 1604 aaPredicted RBP33.51■■■□□ 2.96
NME4-206ENST00000448828 ROBO2Q9HCK4 1378 aa33.5■■■□□ 2.95
NME4-206ENST00000448828 MST1RQ04912 1400 aa33.49■■■□□ 2.95
NME4-206ENST00000448828 JCADQ9P266 1359 aa33.48■■■□□ 2.95
NME4-206ENST00000448828 BRINP3Q76B58 766 aa33.48■■■□□ 2.95
NME4-206ENST00000448828 AHDC1Q5TGY3 1603 aaPredicted RBP33.48■■■□□ 2.95
NME4-206ENST00000448828 ASXL1Q8IXJ9 1541 aa33.46■■■□□ 2.95
NME4-206ENST00000448828 STK26Q9P289 416 aa33.42■■■□□ 2.94
NME4-206ENST00000448828 PIK3C2GO75747 1445 aa33.42■■■□□ 2.94
NME4-206ENST00000448828 PRAG1Q86YV5 1406 aa33.41■■■□□ 2.94
NME4-206ENST00000448828 TMEM132EQ6IEE7 984 aa33.37■■■□□ 2.93
NME4-206ENST00000448828 MYOM2P54296 1465 aa33.35■■■□□ 2.93
NME4-206ENST00000448828 NHSL1Q5SYE7 1610 aa33.35■■■□□ 2.93
NME4-206ENST00000448828 C1orf167Q5SNV9 1468 aa33.34■■■□□ 2.93
NME4-206ENST00000448828 SHPRHQ149N8 1683 aa33.33■■■□□ 2.93
NME4-206ENST00000448828 LRPPRCP42704 1394 aaKnown RBP33.33■■■□□ 2.93
NME4-206ENST00000448828 MEX3CQ5U5Q3 659 aaKnown RBP33.31■■■□□ 2.92
NME4-206ENST00000448828 RGS17Q9UGC6 210 aaPredicted RBP33.31■■■□□ 2.92
NME4-206ENST00000448828 KNDC1Q76NI1 1749 aa33.31■■■□□ 2.92
NME4-206ENST00000448828 SPATA31A6Q5VVP1 1343 aa33.3■■■□□ 2.92
NME4-206ENST00000448828 HRCP23327 699 aa33.3■■■□□ 2.92
NME4-206ENST00000448828 DDX17Q92841 729 aaKnown RBP33.3■■■□□ 2.92
NME4-206ENST00000448828 LAMC1P11047 1609 aa33.3■■■□□ 2.92
NME4-206ENST00000448828 TECPR2O15040 1411 aa33.28■■■□□ 2.92
NME4-206ENST00000448828 YTHDC2Q9H6S0 1430 aaKnown RBP33.28■■■□□ 2.92
NME4-206ENST00000448828 WAPLQ7Z5K2 1190 aa33.28■■■□□ 2.92
NME4-206ENST00000448828 CDC42BPGQ6DT37 1551 aa33.28■■■□□ 2.92
NME4-206ENST00000448828 NRXN1Q9ULB1 1477 aa33.27■■■□□ 2.92
NME4-206ENST00000448828 LRP6O75581 1613 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms