RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 ADGRG1Q9Y653 693 aa12.75□□□□□ -0.37
LINC00349-201ENST00000448748 TOP2AP11388 1531 aaKnown RBP12.74□□□□□ -0.37
LINC00349-201ENST00000448748 EYA1Q99502 592 aa12.74□□□□□ -0.37
LINC00349-201ENST00000448748 SOWAHBA6NEL2 793 aa12.73□□□□□ -0.37
LINC00349-201ENST00000448748 LMOD2Q6P5Q4 547 aa12.73□□□□□ -0.37
LINC00349-201ENST00000448748 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
LINC00349-201ENST00000448748 SAMD7Q7Z3H4 446 aa12.71□□□□□ -0.37
LINC00349-201ENST00000448748 LRCH3Q96II8 777 aa12.71□□□□□ -0.37
LINC00349-201ENST00000448748 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.71□□□□□ -0.37
LINC00349-201ENST00000448748 NESP48681 1621 aa12.7□□□□□ -0.38
LINC00349-201ENST00000448748 RBM46Q8TBY0 533 aaKnown RBP12.69□□□□□ -0.38
LINC00349-201ENST00000448748 HPS5Q9UPZ3 1129 aa12.66□□□□□ -0.38
LINC00349-201ENST00000448748 SWT1Q5T5J6 900 aaKnown RBP12.65□□□□□ -0.38
LINC00349-201ENST00000448748 PXYLP1Q8TE99 480 aa12.65□□□□□ -0.38
LINC00349-201ENST00000448748 WBP1LQ9NX94 342 aa12.65□□□□□ -0.38
LINC00349-201ENST00000448748 OATP04181 439 aa12.64□□□□□ -0.39
LINC00349-201ENST00000448748 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
LINC00349-201ENST00000448748 RCCD1A6NED2 376 aa12.63□□□□□ -0.39
LINC00349-201ENST00000448748 DNAJB2P25686 324 aa12.63□□□□□ -0.39
LINC00349-201ENST00000448748 METTL3Q86U44 580 aaKnown RBP12.63□□□□□ -0.39
LINC00349-201ENST00000448748 TSR3Q9UJK0 312 aaKnown RBP12.63□□□□□ -0.39
LINC00349-201ENST00000448748 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
LINC00349-201ENST00000448748 RNF40O75150 1001 aa12.62□□□□□ -0.39
LINC00349-201ENST00000448748 KIF21AQ7Z4S6 1674 aa12.61□□□□□ -0.39
LINC00349-201ENST00000448748 CADPSQ9ULU8 1353 aa12.61□□□□□ -0.39
LINC00349-201ENST00000448748 TMEM134Q9H6X4 195 aa12.61□□□□□ -0.39
LINC00349-201ENST00000448748 BCANQ96GW7 911 aa12.6□□□□□ -0.39
LINC00349-201ENST00000448748 CFTRP13569 1480 aa12.59□□□□□ -0.39
LINC00349-201ENST00000448748 PPP4CP60510 307 aa12.59□□□□□ -0.39
LINC00349-201ENST00000448748 MAP2K5Q13163 448 aa12.59□□□□□ -0.39
LINC00349-201ENST00000448748 CUX2O14529 1486 aa12.59□□□□□ -0.39
LINC00349-201ENST00000448748 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
LINC00349-201ENST00000448748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
LINC00349-201ENST00000448748 PRDM2Q13029 1718 aa12.58□□□□□ -0.4
LINC00349-201ENST00000448748 ZC3H15Q8WU90 426 aaKnown RBP12.58□□□□□ -0.4
LINC00349-201ENST00000448748 SLF2Q8IX21 1173 aa12.57□□□□□ -0.4
LINC00349-201ENST00000448748 NLRP7Q8WX94 980 aa12.57□□□□□ -0.4
LINC00349-201ENST00000448748 PHOX2BQ99453 314 aa12.57□□□□□ -0.4
LINC00349-201ENST00000448748 NYAP1Q6ZVC0 841 aa12.56□□□□□ -0.4
LINC00349-201ENST00000448748 PDS5BQ9NTI5 1447 aa12.55□□□□□ -0.4
LINC00349-201ENST00000448748 IRF6O14896 467 aa12.55□□□□□ -0.4
LINC00349-201ENST00000448748 ZMYND10O75800 440 aa12.54□□□□□ -0.4
LINC00349-201ENST00000448748 PLA2G2EQ9NZK7 142 aa12.54□□□□□ -0.4
LINC00349-201ENST00000448748 MINK1Q8N4C8 1332 aaPredicted RBP12.54□□□□□ -0.4
LINC00349-201ENST00000448748 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
LINC00349-201ENST00000448748 SLC4A3P48751 1232 aa12.52□□□□□ -0.41
LINC00349-201ENST00000448748 BARGINQ6ZT62 677 aa12.52□□□□□ -0.41
LINC00349-201ENST00000448748 CCDC102AQ96A19 550 aa12.52□□□□□ -0.41
LINC00349-201ENST00000448748 APLP1P51693 650 aa12.5□□□□□ -0.41
LINC00349-201ENST00000448748 WDR62O43379 1518 aa12.49□□□□□ -0.41
LINC00349-201ENST00000448748 KRI1Q8N9T8 703 aaKnown RBP12.49□□□□□ -0.41
LINC00349-201ENST00000448748 NECTIN2Q92692 538 aa12.49□□□□□ -0.41
LINC00349-201ENST00000448748 FANCD2Q9BXW9 1451 aa12.47□□□□□ -0.41
LINC00349-201ENST00000448748 SLC10A3P09131 477 aa12.47□□□□□ -0.41
LINC00349-201ENST00000448748 DAXXQ9UER7 740 aaPredicted RBP12.47□□□□□ -0.41
LINC00349-201ENST00000448748 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.41
LINC00349-201ENST00000448748 CEP164Q9UPV0 1460 aa12.46□□□□□ -0.42
LINC00349-201ENST00000448748 ITGBL1O95965 494 aaPredicted RBP12.44□□□□□ -0.42
LINC00349-201ENST00000448748 DDX11L8A8MPP1 907 aa12.42□□□□□ -0.42
LINC00349-201ENST00000448748 CFHP08603 1231 aa12.42□□□□□ -0.42
LINC00349-201ENST00000448748 MDM2Q00987 491 aaPredicted RBP12.42□□□□□ -0.42
LINC00349-201ENST00000448748 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
LINC00349-201ENST00000448748 RDH13Q8NBN7 331 aa12.4□□□□□ -0.42
LINC00349-201ENST00000448748 MTRQ99707 1265 aa12.4□□□□□ -0.42
LINC00349-201ENST00000448748 PRR14Q9BWN1 585 aa12.4□□□□□ -0.42
LINC00349-201ENST00000448748 URB2Q14146 1524 aaKnown RBP12.39□□□□□ -0.43
LINC00349-201ENST00000448748 KCNC4Q03721 635 aa12.39□□□□□ -0.43
LINC00349-201ENST00000448748 KMT5BQ4FZB7 885 aa12.39□□□□□ -0.43
LINC00349-201ENST00000448748 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
LINC00349-201ENST00000448748 RSPH4AQ5TD94 716 aa12.38□□□□□ -0.43
LINC00349-201ENST00000448748 SULF1Q8IWU6 871 aa12.38□□□□□ -0.43
LINC00349-201ENST00000448748 ACTN4O43707 911 aaKnown RBP12.36□□□□□ -0.43
LINC00349-201ENST00000448748 COPS2P61201 443 aa12.36□□□□□ -0.43
LINC00349-201ENST00000448748 PCDHB3Q9Y5E6 796 aa12.36□□□□□ -0.43
LINC00349-201ENST00000448748 ZNF516Q92618 1163 aa12.35□□□□□ -0.43
LINC00349-201ENST00000448748 IL21Q9HBE4 155 aa12.35□□□□□ -0.43
LINC00349-201ENST00000448748 GPCPD1Q9NPB8 672 aa12.35□□□□□ -0.43
LINC00349-201ENST00000448748 CLCN1P35523 988 aa12.34□□□□□ -0.43
LINC00349-201ENST00000448748 BLOC1S3Q6QNY0 202 aa12.34□□□□□ -0.43
LINC00349-201ENST00000448748 TMUB1Q9BVT8 246 aa12.34□□□□□ -0.43
LINC00349-201ENST00000448748 REPIN1Q9BWE0 567 aaKnown RBP12.34□□□□□ -0.43
LINC00349-201ENST00000448748 SLC24A3Q9HC58 644 aa12.34□□□□□ -0.43
LINC00349-201ENST00000448748 AK7Q96M32 723 aa12.33□□□□□ -0.44
LINC00349-201ENST00000448748 CD46P15529 392 aa12.32□□□□□ -0.44
LINC00349-201ENST00000448748 GCGRP47871 477 aa12.32□□□□□ -0.44
LINC00349-201ENST00000448748 AMHR2Q16671 573 aa12.32□□□□□ -0.44
LINC00349-201ENST00000448748 TRIM66O15016 1216 aa12.31□□□□□ -0.44
LINC00349-201ENST00000448748 DNMBPQ6XZF7 1577 aa12.3□□□□□ -0.44
LINC00349-201ENST00000448748 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
LINC00349-201ENST00000448748 FAM217BQ9NTX9 383 aaPredicted RBP12.3□□□□□ -0.44
LINC00349-201ENST00000448748 TOPBP1Q92547 1522 aa12.3□□□□□ -0.44
LINC00349-201ENST00000448748 A0A0G2JS52 829 aa12.29□□□□□ -0.44
LINC00349-201ENST00000448748 PUS10Q3MIT2 529 aaKnown RBP12.29□□□□□ -0.44
LINC00349-201ENST00000448748 ABCC8Q09428 1581 aa12.28□□□□□ -0.44
LINC00349-201ENST00000448748 ZPR1O75312 459 aa12.28□□□□□ -0.44
LINC00349-201ENST00000448748 FUT2Q10981 343 aa12.28□□□□□ -0.44
LINC00349-201ENST00000448748 NKX2-3Q8TAU0 364 aa12.27□□□□□ -0.45
LINC00349-201ENST00000448748 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
LINC00349-201ENST00000448748 SSTR3P32745 418 aaPredicted RBP12.24□□□□□ -0.45
LINC00349-201ENST00000448748 PARP9Q8IXQ6 854 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms