RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 DMRT2Q9Y5R5 561 aa26.49■■□□□ 1.83
SMARCD2-203ENST00000448276 AMER1Q5JTC6 1135 aaPredicted RBP26.48■■□□□ 1.83
SMARCD2-203ENST00000448276 ARXQ96QS3 562 aa26.46■■□□□ 1.83
SMARCD2-203ENST00000448276 UBE2Q2Q8WVN8 375 aa26.44■■□□□ 1.82
SMARCD2-203ENST00000448276 FAM43AQ8N2R8 423 aa26.44■■□□□ 1.82
SMARCD2-203ENST00000448276 CHD1O14646 1710 aa26.44■■□□□ 1.82
SMARCD2-203ENST00000448276 WDR7Q9Y4E6 1490 aa26.43■■□□□ 1.82
SMARCD2-203ENST00000448276 PANK1Q8TE04 598 aa26.42■■□□□ 1.82
SMARCD2-203ENST00000448276 TRMT2AQ8IZ69 625 aaKnown RBP26.41■■□□□ 1.82
SMARCD2-203ENST00000448276 COG6Q9Y2V7 657 aa26.4■■□□□ 1.82
SMARCD2-203ENST00000448276 EIF3AQ14152 1382 aaKnown RBP26.38■■□□□ 1.81
SMARCD2-203ENST00000448276 CCDC141Q6ZP82 1450 aa26.37■■□□□ 1.81
SMARCD2-203ENST00000448276 RRAGDQ9NQL2 400 aaPredicted RBP26.36■■□□□ 1.81
SMARCD2-203ENST00000448276 NKTRP30414 1462 aaKnown RBP26.36■■□□□ 1.81
SMARCD2-203ENST00000448276 MYO5CQ9NQX4 1742 aa26.36■■□□□ 1.81
SMARCD2-203ENST00000448276 CANXP27824 592 aaKnown RBP26.35■■□□□ 1.81
SMARCD2-203ENST00000448276 SPRYD3Q8NCJ5 442 aa26.35■■□□□ 1.81
SMARCD2-203ENST00000448276 ERCC6L2Q5T890 1561 aa26.34■■□□□ 1.81
SMARCD2-203ENST00000448276 SAMD9LQ8IVG5 1584 aa26.34■■□□□ 1.81
SMARCD2-203ENST00000448276 ARHGEF5Q12774 1597 aa26.33■■□□□ 1.81
SMARCD2-203ENST00000448276 LAMC1P11047 1609 aa26.33■■□□□ 1.81
SMARCD2-203ENST00000448276 RSPH6AQ9H0K4 717 aa26.33■■□□□ 1.81
SMARCD2-203ENST00000448276 CLUAP1Q96AJ1 413 aa26.31■■□□□ 1.8
SMARCD2-203ENST00000448276 E9PSI1 815 aa26.3■■□□□ 1.8
SMARCD2-203ENST00000448276 BECN1Q14457 450 aa26.3■■□□□ 1.8
SMARCD2-203ENST00000448276 TNNQ9UQP3 1299 aa26.3■■□□□ 1.8
SMARCD2-203ENST00000448276 NEUROD2Q15784 382 aa26.29■■□□□ 1.8
SMARCD2-203ENST00000448276 CDC42BPBQ9Y5S2 1711 aa26.27■■□□□ 1.8
SMARCD2-203ENST00000448276 ANTXR1Q9H6X2 564 aa26.27■■□□□ 1.8
SMARCD2-203ENST00000448276 EIF2AK4Q9P2K8 1649 aaKnown RBP26.27■■□□□ 1.8
SMARCD2-203ENST00000448276 SYCP2Q9BX26 1530 aa26.26■■□□□ 1.8
SMARCD2-203ENST00000448276 CENPJQ9HC77 1338 aaPredicted RBP26.26■■□□□ 1.79
SMARCD2-203ENST00000448276 ARHGAP5Q13017 1502 aa26.26■■□□□ 1.79
SMARCD2-203ENST00000448276 RSPH4AQ5TD94 716 aa26.26■■□□□ 1.79
SMARCD2-203ENST00000448276 GZF1Q9H116 711 aaPredicted RBP26.25■■□□□ 1.79
SMARCD2-203ENST00000448276 CGNL1Q0VF96 1302 aa26.25■■□□□ 1.79
SMARCD2-203ENST00000448276 ASXL1Q8IXJ9 1541 aa26.25■■□□□ 1.79
SMARCD2-203ENST00000448276 NLRP1Q9C000 1473 aa26.24■■□□□ 1.79
SMARCD2-203ENST00000448276 PIK3C2GO75747 1445 aa26.24■■□□□ 1.79
SMARCD2-203ENST00000448276 RRP7AQ9Y3A4 280 aaKnown RBP26.24■■□□□ 1.79
SMARCD2-203ENST00000448276 MAPK8IP3Q9UPT6 1336 aa26.24■■□□□ 1.79
SMARCD2-203ENST00000448276 BCL2L13Q9BXK5 485 aa26.24■■□□□ 1.79
SMARCD2-203ENST00000448276 CLASP1Q7Z460 1538 aa26.24■■□□□ 1.79
SMARCD2-203ENST00000448276 TBC1D2Q9BYX2 928 aa26.23■■□□□ 1.79
SMARCD2-203ENST00000448276 PCDHB15Q9Y5E8 787 aa26.23■■□□□ 1.79
SMARCD2-203ENST00000448276 PDE3AQ14432 1141 aa26.23■■□□□ 1.79
SMARCD2-203ENST00000448276 SHROOM2Q13796 1616 aa26.22■■□□□ 1.79
SMARCD2-203ENST00000448276 PREX2Q70Z35 1606 aa26.22■■□□□ 1.79
SMARCD2-203ENST00000448276 TTC37Q6PGP7 1564 aa26.22■■□□□ 1.79
SMARCD2-203ENST00000448276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.21■■□□□ 1.79
SMARCD2-203ENST00000448276 UNC13BO14795 1591 aa26.21■■□□□ 1.79
SMARCD2-203ENST00000448276 RLBP1P12271 317 aa26.21■■□□□ 1.79
SMARCD2-203ENST00000448276 WWC1Q8IX03 1113 aa26.2■■□□□ 1.78
SMARCD2-203ENST00000448276 PANK2Q9BZ23 570 aa26.19■■□□□ 1.78
SMARCD2-203ENST00000448276 ABCC2Q92887 1545 aa26.19■■□□□ 1.78
SMARCD2-203ENST00000448276 VIRMAQ69YN4 1812 aaKnown RBP26.19■■□□□ 1.78
SMARCD2-203ENST00000448276 CDCA8Q53HL2 280 aa26.18■■□□□ 1.78
SMARCD2-203ENST00000448276 RNF17Q9BXT8 1623 aaKnown RBP26.18■■□□□ 1.78
SMARCD2-203ENST00000448276 XRCC6P12956 609 aaKnown RBP eCLIP26.18■■□□□ 1.78
SMARCD2-203ENST00000448276 PDZRN3Q9UPQ7 1066 aa26.18■■□□□ 1.78
SMARCD2-203ENST00000448276 TNNT2P45379 298 aaPredicted RBP26.17■■□□□ 1.78
SMARCD2-203ENST00000448276 TBC1D32Q96NH3 1257 aa26.17■■□□□ 1.78
SMARCD2-203ENST00000448276 CARD14Q9BXL6 1004 aa26.17■■□□□ 1.78
SMARCD2-203ENST00000448276 L1TD1Q5T7N2 865 aaKnown RBP26.17■■□□□ 1.78
SMARCD2-203ENST00000448276 UPF2Q9HAU5 1272 aaKnown RBP26.15■■□□□ 1.78
SMARCD2-203ENST00000448276 SYNMO15061 1565 aa26.15■■□□□ 1.78
SMARCD2-203ENST00000448276 IQGAP3Q86VI3 1631 aa26.15■■□□□ 1.78
SMARCD2-203ENST00000448276 RARSP54136 660 aaKnown RBP26.12■■□□□ 1.77
SMARCD2-203ENST00000448276 SCAF11Q99590 1463 aaKnown RBP26.12■■□□□ 1.77
SMARCD2-203ENST00000448276 MADDQ8WXG6 1647 aa26.11■■□□□ 1.77
SMARCD2-203ENST00000448276 GOLGA6L3A6NEY3 463 aa26.1■■□□□ 1.77
SMARCD2-203ENST00000448276 IQGAP1P46940 1657 aa26.1■■□□□ 1.77
SMARCD2-203ENST00000448276 MYOM1P52179 1685 aa26.1■■□□□ 1.77
SMARCD2-203ENST00000448276 EFCAB2Q5VUJ9 269 aa26.09■■□□□ 1.77
SMARCD2-203ENST00000448276 PMFBP1Q8TBY8 1022 aa26.09■■□□□ 1.77
SMARCD2-203ENST00000448276 ATP10AO60312 1499 aa26.09■■□□□ 1.77
SMARCD2-203ENST00000448276 MCM4P33991 863 aa26.08■■□□□ 1.77
SMARCD2-203ENST00000448276 NPC1L1Q9UHC9 1359 aa26.07■■□□□ 1.76
SMARCD2-203ENST00000448276 NAP1L5Q96NT1 182 aaPredicted RBP26.07■■□□□ 1.76
SMARCD2-203ENST00000448276 CFAP70Q5T0N1 1121 aa26.06■■□□□ 1.76
SMARCD2-203ENST00000448276 MFAP1P55081 439 aaKnown RBP26.05■■□□□ 1.76
SMARCD2-203ENST00000448276 TCP11L2Q8N4U5 519 aa26.04■■□□□ 1.76
SMARCD2-203ENST00000448276 PLCH2O75038 1416 aa26.04■■□□□ 1.76
SMARCD2-203ENST00000448276 FSD2A1L4K1 749 aa26.03■■□□□ 1.76
SMARCD2-203ENST00000448276 MAST1Q9Y2H9 1570 aa26.03■■□□□ 1.76
SMARCD2-203ENST00000448276 NINLQ9Y2I6 1382 aa26.02■■□□□ 1.76
SMARCD2-203ENST00000448276 ZCCHC11Q5TAX3 1644 aaKnown RBP26.01■■□□□ 1.75
SMARCD2-203ENST00000448276 TRAK2O60296 914 aa26.01■■□□□ 1.75
SMARCD2-203ENST00000448276 AFAP1Q8N556 730 aa26.01■■□□□ 1.75
SMARCD2-203ENST00000448276 RWDD1Q9H446 243 aaPredicted RBP26■■□□□ 1.75
SMARCD2-203ENST00000448276 DUOX2Q9NRD8 1548 aa26■■□□□ 1.75
SMARCD2-203ENST00000448276 C22orf23Q9BZE7 217 aa25.99■■□□□ 1.75
SMARCD2-203ENST00000448276 PNNQ9H307 717 aaKnown RBP25.99■■□□□ 1.75
SMARCD2-203ENST00000448276 TRAPPC8Q9Y2L5 1435 aa25.97■■□□□ 1.75
SMARCD2-203ENST00000448276 ERVK-7P63135 1459 aa25.97■■□□□ 1.75
SMARCD2-203ENST00000448276 PLXNC1O60486 1568 aa25.96■■□□□ 1.75
SMARCD2-203ENST00000448276 MORC1Q86VD1 984 aa25.96■■□□□ 1.75
SMARCD2-203ENST00000448276 RUNDC1Q96C34 613 aa25.96■■□□□ 1.75
SMARCD2-203ENST00000448276 SCAPERQ9BY12 1400 aa25.96■■□□□ 1.75
SMARCD2-203ENST00000448276 KDM5AP29375 1690 aaKnown RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms