RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 SCAF11Q99590 1463 aaKnown RBP19.17■□□□□ 0.66
ERGIC3-209ENST00000447986 ZNF326Q5BKZ1 582 aaKnown RBP19.17■□□□□ 0.66
ERGIC3-209ENST00000447986 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.17■□□□□ 0.66
ERGIC3-209ENST00000447986 POLR1AO95602 1720 aaPredicted RBP19.17■□□□□ 0.66
ERGIC3-209ENST00000447986 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
ERGIC3-209ENST00000447986 SCAF1Q9H7N4 1312 aaKnown RBP19.15■□□□□ 0.66
ERGIC3-209ENST00000447986 PPP1R15AO75807 674 aaPredicted RBP19.15■□□□□ 0.66
ERGIC3-209ENST00000447986 KIF1BO60333 1816 aa19.15■□□□□ 0.66
ERGIC3-209ENST00000447986 RIMS2Q9UQ26 1411 aa19.14■□□□□ 0.66
ERGIC3-209ENST00000447986 MED14O60244 1454 aa19.14■□□□□ 0.65
ERGIC3-209ENST00000447986 NPHP4O75161 1426 aaPredicted RBP19.14■□□□□ 0.65
ERGIC3-209ENST00000447986 LTKP29376 864 aa19.14■□□□□ 0.65
ERGIC3-209ENST00000447986 ANKRD30BQ9BXX2 1392 aa19.13■□□□□ 0.65
ERGIC3-209ENST00000447986 NEURL4Q96JN8 1562 aa19.12■□□□□ 0.65
ERGIC3-209ENST00000447986 ZFYVE9O95405 1425 aa19.12■□□□□ 0.65
ERGIC3-209ENST00000447986 MYO5BQ9ULV0 1848 aa19.11■□□□□ 0.65
ERGIC3-209ENST00000447986 BCANQ96GW7 911 aa19.11■□□□□ 0.65
ERGIC3-209ENST00000447986 RPGRIP1LQ68CZ1 1315 aa19.09■□□□□ 0.65
ERGIC3-209ENST00000447986 MSH5O43196 834 aa19.09■□□□□ 0.65
ERGIC3-209ENST00000447986 IQGAP1P46940 1657 aa19.09■□□□□ 0.65
ERGIC3-209ENST00000447986 DHX57Q6P158 1386 aaKnown RBP19.07■□□□□ 0.64
ERGIC3-209ENST00000447986 PLEKHG1Q9ULL1 1385 aa19.07■□□□□ 0.64
ERGIC3-209ENST00000447986 RGL3Q3MIN7 710 aa19.07■□□□□ 0.64
ERGIC3-209ENST00000447986 NUTM2DQ5VT03 806 aaPredicted RBP19.07■□□□□ 0.64
ERGIC3-209ENST00000447986 VGFO15240 615 aaPredicted RBP19.06■□□□□ 0.64
ERGIC3-209ENST00000447986 SPATA31E1Q6ZUB1 1445 aa19.05■□□□□ 0.64
ERGIC3-209ENST00000447986 NEXMIFQ5QGS0 1516 aa19.04■□□□□ 0.64
ERGIC3-209ENST00000447986 SLC26A8Q96RN1 970 aa19■□□□□ 0.63
ERGIC3-209ENST00000447986 ZNF335Q9H4Z2 1342 aaPredicted RBP18.99■□□□□ 0.63
ERGIC3-209ENST00000447986 TBX22Q9Y458 520 aa18.98■□□□□ 0.63
ERGIC3-209ENST00000447986 PPLO60437 1756 aa18.97■□□□□ 0.63
ERGIC3-209ENST00000447986 DIP2AQ14689 1571 aa18.97■□□□□ 0.63
ERGIC3-209ENST00000447986 STAC3Q96MF2 364 aa18.96■□□□□ 0.63
ERGIC3-209ENST00000447986 SETBP1Q9Y6X0 1596 aa18.96■□□□□ 0.63
ERGIC3-209ENST00000447986 ADAMTS13Q76LX8 1427 aa18.95■□□□□ 0.62
ERGIC3-209ENST00000447986 NEUROD1Q13562 356 aa18.93■□□□□ 0.62
ERGIC3-209ENST00000447986 DCAF11Q8TEB1 546 aa18.93■□□□□ 0.62
ERGIC3-209ENST00000447986 CPS1P31327 1500 aa18.93■□□□□ 0.62
ERGIC3-209ENST00000447986 MYOM2P54296 1465 aa18.93■□□□□ 0.62
ERGIC3-209ENST00000447986 IFT172Q9UG01 1749 aa18.93■□□□□ 0.62
ERGIC3-209ENST00000447986 SIN3AQ96ST3 1273 aa18.92■□□□□ 0.62
ERGIC3-209ENST00000447986 LTBP4Q8N2S1 1624 aa18.92■□□□□ 0.62
ERGIC3-209ENST00000447986 PIK3R4Q99570 1358 aa18.92■□□□□ 0.62
ERGIC3-209ENST00000447986 ADGRF5Q8IZF2 1346 aa18.92■□□□□ 0.62
ERGIC3-209ENST00000447986 KCNA6P17658 529 aa18.92■□□□□ 0.62
ERGIC3-209ENST00000447986 CERKQ8TCT0 537 aa18.9■□□□□ 0.62
ERGIC3-209ENST00000447986 KDM2AQ9Y2K7 1162 aa18.9■□□□□ 0.62
ERGIC3-209ENST00000447986 NRXN3Q9Y4C0 1643 aa18.9■□□□□ 0.62
ERGIC3-209ENST00000447986 PIK3C2GO75747 1445 aa18.88■□□□□ 0.61
ERGIC3-209ENST00000447986 CLSPNQ9HAW4 1339 aa18.88■□□□□ 0.61
ERGIC3-209ENST00000447986 ALKQ9UM73 1620 aa18.87■□□□□ 0.61
ERGIC3-209ENST00000447986 NRXN1Q9ULB1 1477 aa18.87■□□□□ 0.61
ERGIC3-209ENST00000447986 NKTRP30414 1462 aaKnown RBP18.86■□□□□ 0.61
ERGIC3-209ENST00000447986 NWD1Q149M9 1564 aa18.86■□□□□ 0.61
ERGIC3-209ENST00000447986 CCER1Q8TC90 406 aaPredicted RBP18.85■□□□□ 0.61
ERGIC3-209ENST00000447986 METP08581 1390 aa18.85■□□□□ 0.61
ERGIC3-209ENST00000447986 IQSEC2Q5JU85 1478 aa18.85■□□□□ 0.61
ERGIC3-209ENST00000447986 AMOTL2Q9Y2J4 779 aa18.85■□□□□ 0.61
ERGIC3-209ENST00000447986 TONSLQ96HA7 1378 aa18.84■□□□□ 0.61
ERGIC3-209ENST00000447986 L3MBTL2Q969R5 705 aa18.84■□□□□ 0.61
ERGIC3-209ENST00000447986 CHD2O14647 1828 aaKnown RBP18.83■□□□□ 0.61
ERGIC3-209ENST00000447986 ZBTB22O15209 634 aa18.83■□□□□ 0.61
ERGIC3-209ENST00000447986 PROSER2Q86WR7 435 aaPredicted RBP18.83■□□□□ 0.61
ERGIC3-209ENST00000447986 C14orf93Q9H972 538 aaKnown RBP18.83■□□□□ 0.61
ERGIC3-209ENST00000447986 LAMC1P11047 1609 aa18.83■□□□□ 0.6
ERGIC3-209ENST00000447986 STRCP1A6NGW2 1772 aa18.82■□□□□ 0.6
ERGIC3-209ENST00000447986 LRRC7Q96NW7 1537 aa18.82■□□□□ 0.6
ERGIC3-209ENST00000447986 MAPK8IP2Q13387 824 aaPredicted RBP18.81■□□□□ 0.6
ERGIC3-209ENST00000447986 CFAP70Q5T0N1 1121 aa18.81■□□□□ 0.6
ERGIC3-209ENST00000447986 PTPRUQ92729 1446 aa18.8■□□□□ 0.6
ERGIC3-209ENST00000447986 SETD1AO15047 1707 aaKnown RBP18.8■□□□□ 0.6
ERGIC3-209ENST00000447986 TMEM94Q12767 1356 aa18.79■□□□□ 0.6
ERGIC3-209ENST00000447986 XRN1Q8IZH2 1706 aaKnown RBP18.77■□□□□ 0.6
ERGIC3-209ENST00000447986 TMEM132EQ6IEE7 984 aa18.77■□□□□ 0.6
ERGIC3-209ENST00000447986 PRAG1Q86YV5 1406 aa18.77■□□□□ 0.59
ERGIC3-209ENST00000447986 NCOA3Q9Y6Q9 1424 aa18.77■□□□□ 0.59
ERGIC3-209ENST00000447986 C14orf37Q86TY3 774 aa18.76■□□□□ 0.59
ERGIC3-209ENST00000447986 LRPPRCP42704 1394 aaKnown RBP18.76■□□□□ 0.59
ERGIC3-209ENST00000447986 PTCH1Q13635 1447 aa18.75■□□□□ 0.59
ERGIC3-209ENST00000447986 STK26Q9P289 416 aa18.74■□□□□ 0.59
ERGIC3-209ENST00000447986 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
ERGIC3-209ENST00000447986 YTHDC2Q9H6S0 1430 aaKnown RBP18.74■□□□□ 0.59
ERGIC3-209ENST00000447986 RBM33Q96EV2 1170 aaKnown RBP18.74■□□□□ 0.59
ERGIC3-209ENST00000447986 MSH6P52701 1360 aa18.73■□□□□ 0.59
ERGIC3-209ENST00000447986 ABCC11Q96J66 1382 aa18.73■□□□□ 0.59
ERGIC3-209ENST00000447986 TOM1O60784 492 aa18.73■□□□□ 0.59
ERGIC3-209ENST00000447986 ASXL1Q8IXJ9 1541 aa18.73■□□□□ 0.59
ERGIC3-209ENST00000447986 TECPR2O15040 1411 aa18.72■□□□□ 0.59
ERGIC3-209ENST00000447986 UBAP1LF5GYI3 381 aa18.71■□□□□ 0.59
ERGIC3-209ENST00000447986 FBXO41Q8TF61 875 aa18.71■□□□□ 0.59
ERGIC3-209ENST00000447986 KIAA1210Q9ULL0 1709 aa18.71■□□□□ 0.59
ERGIC3-209ENST00000447986 ADGRB1O14514 1584 aa18.7■□□□□ 0.58
ERGIC3-209ENST00000447986 ROBO2Q9HCK4 1378 aa18.7■□□□□ 0.58
ERGIC3-209ENST00000447986 C19orf44Q9H6X5 657 aa18.7■□□□□ 0.58
ERGIC3-209ENST00000447986 SIRT1Q96EB6 747 aa18.69■□□□□ 0.58
ERGIC3-209ENST00000447986 XIRP1Q702N8 1843 aaKnown RBP18.68■□□□□ 0.58
ERGIC3-209ENST00000447986 KNDC1Q76NI1 1749 aa18.68■□□□□ 0.58
ERGIC3-209ENST00000447986 FAM135BQ49AJ0 1406 aa18.67■□□□□ 0.58
ERGIC3-209ENST00000447986 ATF3P18847 181 aa18.67■□□□□ 0.58
ERGIC3-209ENST00000447986 TRAK1Q9UPV9 953 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms