RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 SENP3Q9H4L4 574 aaPredicted RBP37.2■■■■□ 3.55
UFD1-204ENST00000447868 PPP1R15AO75807 674 aaPredicted RBP37.19■■■■□ 3.54
UFD1-204ENST00000447868 MPHOSPH9Q99550 1183 aa37.19■■■■□ 3.54
UFD1-204ENST00000447868 HDGFP51858 240 aaKnown RBP37.18■■■■□ 3.54
UFD1-204ENST00000447868 NUTM2DQ5VT03 806 aaPredicted RBP37.17■■■■□ 3.54
UFD1-204ENST00000447868 BCANQ96GW7 911 aa37.17■■■■□ 3.54
UFD1-204ENST00000447868 ACIN1Q9UKV3 1341 aaKnown RBP37.14■■■■□ 3.54
UFD1-204ENST00000447868 CPS1P31327 1500 aa37.14■■■■□ 3.54
UFD1-204ENST00000447868 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.13■■■■□ 3.53
UFD1-204ENST00000447868 IQSEC2Q5JU85 1478 aa37.13■■■■□ 3.53
UFD1-204ENST00000447868 STRCP1A6NGW2 1772 aa37.12■■■■□ 3.53
UFD1-204ENST00000447868 ZNF326Q5BKZ1 582 aaKnown RBP37.12■■■■□ 3.53
UFD1-204ENST00000447868 SLC26A8Q96RN1 970 aa37.12■■■■□ 3.53
UFD1-204ENST00000447868 KIF1BO60333 1816 aa37.1■■■■□ 3.53
UFD1-204ENST00000447868 PLEKHG1Q9ULL1 1385 aa37.1■■■■□ 3.53
UFD1-204ENST00000447868 LRRC7Q96NW7 1537 aa36.97■■■■□ 3.51
UFD1-204ENST00000447868 CCDC144AA2RUR9 1427 aa36.97■■■■□ 3.51
UFD1-204ENST00000447868 NEXMIFQ5QGS0 1516 aa36.95■■■■□ 3.51
UFD1-204ENST00000447868 UBAP1LF5GYI3 381 aa36.94■■■■□ 3.5
UFD1-204ENST00000447868 KCNA6P17658 529 aa36.94■■■■□ 3.5
UFD1-204ENST00000447868 HRCP23327 699 aa36.94■■■■□ 3.5
UFD1-204ENST00000447868 ADAMTS13Q76LX8 1427 aa36.93■■■■□ 3.5
UFD1-204ENST00000447868 TBX22Q9Y458 520 aa36.91■■■■□ 3.5
UFD1-204ENST00000447868 DIP2AQ14689 1571 aa36.88■■■■□ 3.49
UFD1-204ENST00000447868 NWD1Q149M9 1564 aa36.87■■■■□ 3.49
UFD1-204ENST00000447868 NRXN3Q9Y4C0 1643 aa36.85■■■■□ 3.49
UFD1-204ENST00000447868 CHD2O14647 1828 aaKnown RBP36.85■■■■□ 3.49
UFD1-204ENST00000447868 SETBP1Q9Y6X0 1596 aa36.84■■■■□ 3.49
UFD1-204ENST00000447868 RPGRIP1LQ68CZ1 1315 aa36.84■■■■□ 3.49
UFD1-204ENST00000447868 RGL3Q3MIN7 710 aa36.83■■■■□ 3.49
UFD1-204ENST00000447868 XIRP1Q702N8 1843 aaKnown RBP36.82■■■■□ 3.49
UFD1-204ENST00000447868 PROSER2Q86WR7 435 aaPredicted RBP36.82■■■■□ 3.48
UFD1-204ENST00000447868 PPLO60437 1756 aa36.81■■■■□ 3.48
UFD1-204ENST00000447868 SPATA31E1Q6ZUB1 1445 aa36.8■■■■□ 3.48
UFD1-204ENST00000447868 VGFO15240 615 aaPredicted RBP36.8■■■■□ 3.48
UFD1-204ENST00000447868 TOM1O60784 492 aa36.8■■■■□ 3.48
UFD1-204ENST00000447868 RBM33Q96EV2 1170 aaKnown RBP36.8■■■■□ 3.48
UFD1-204ENST00000447868 NKTRP30414 1462 aaKnown RBP36.8■■■■□ 3.48
UFD1-204ENST00000447868 TMEM94Q12767 1356 aa36.78■■■■□ 3.48
UFD1-204ENST00000447868 SCAF1Q9H7N4 1312 aaKnown RBP36.76■■■■□ 3.47
UFD1-204ENST00000447868 PIK3R4Q99570 1358 aa36.76■■■■□ 3.47
UFD1-204ENST00000447868 PIP4K2BP78356 416 aa36.75■■■■□ 3.47
UFD1-204ENST00000447868 ANKRD30BQ9BXX2 1392 aa36.74■■■■□ 3.47
UFD1-204ENST00000447868 PTPRUQ92729 1446 aa36.72■■■■□ 3.47
UFD1-204ENST00000447868 AMOTL2Q9Y2J4 779 aa36.71■■■■□ 3.47
UFD1-204ENST00000447868 ALKQ9UM73 1620 aa36.7■■■■□ 3.47
UFD1-204ENST00000447868 METP08581 1390 aa36.7■■■■□ 3.47
UFD1-204ENST00000447868 IFT172Q9UG01 1749 aa36.68■■■■□ 3.46
UFD1-204ENST00000447868 ADGRF5Q8IZF2 1346 aa36.65■■■■□ 3.46
UFD1-204ENST00000447868 SETD1AO15047 1707 aaKnown RBP36.62■■■■□ 3.45
UFD1-204ENST00000447868 XRN1Q8IZH2 1706 aaKnown RBP36.62■■■■□ 3.45
UFD1-204ENST00000447868 TRIM26Q12899 539 aaPredicted RBP36.61■■■■□ 3.45
UFD1-204ENST00000447868 C14orf37Q86TY3 774 aa36.59■■■■□ 3.45
UFD1-204ENST00000447868 MSH6P52701 1360 aa36.58■■■■□ 3.45
UFD1-204ENST00000447868 NCOA3Q9Y6Q9 1424 aa36.53■■■■□ 3.44
UFD1-204ENST00000447868 PIK3C2GO75747 1445 aa36.51■■■■□ 3.43
UFD1-204ENST00000447868 HSPA1LP34931 641 aa36.5■■■■□ 3.43
UFD1-204ENST00000447868 MYOM2P54296 1465 aa36.49■■■■□ 3.43
UFD1-204ENST00000447868 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.45■■■■□ 3.43
UFD1-204ENST00000447868 C19orf44Q9H6X5 657 aa36.45■■■■□ 3.43
UFD1-204ENST00000447868 NRXN1Q9ULB1 1477 aa36.43■■■■□ 3.42
UFD1-204ENST00000447868 KDM2AQ9Y2K7 1162 aa36.43■■■■□ 3.42
UFD1-204ENST00000447868 DCAF11Q8TEB1 546 aa36.42■■■■□ 3.42
UFD1-204ENST00000447868 ROBO2Q9HCK4 1378 aa36.41■■■■□ 3.42
UFD1-204ENST00000447868 TMEM132EQ6IEE7 984 aa36.41■■■■□ 3.42
UFD1-204ENST00000447868 PTCH1Q13635 1447 aa36.41■■■■□ 3.42
UFD1-204ENST00000447868 ATF3P18847 181 aa36.4■■■■□ 3.42
UFD1-204ENST00000447868 SLAIN2Q9P270 581 aa36.4■■■■□ 3.42
UFD1-204ENST00000447868 STK26Q9P289 416 aa36.39■■■■□ 3.42
UFD1-204ENST00000447868 ASXL1Q8IXJ9 1541 aa36.39■■■■□ 3.42
UFD1-204ENST00000447868 FAM135BQ49AJ0 1406 aa36.38■■■■□ 3.41
UFD1-204ENST00000447868 C14orf93Q9H972 538 aaKnown RBP36.38■■■■□ 3.41
UFD1-204ENST00000447868 ROBO1Q9Y6N7 1651 aa36.38■■■■□ 3.41
UFD1-204ENST00000447868 CFAP70Q5T0N1 1121 aa36.37■■■■□ 3.41
UFD1-204ENST00000447868 CADPS2Q86UW7 1296 aa36.37■■■■□ 3.41
UFD1-204ENST00000447868 DHX57Q6P158 1386 aaKnown RBP36.36■■■■□ 3.41
UFD1-204ENST00000447868 PRAG1Q86YV5 1406 aa36.34■■■■□ 3.41
UFD1-204ENST00000447868 LAMC1P11047 1609 aa36.34■■■■□ 3.41
UFD1-204ENST00000447868 NALCNQ8IZF0 1738 aa36.34■■■■□ 3.41
UFD1-204ENST00000447868 ADGRL3Q9HAR2 1447 aa36.34■■■■□ 3.41
UFD1-204ENST00000447868 LRPPRCP42704 1394 aaKnown RBP36.33■■■■□ 3.41
UFD1-204ENST00000447868 DCCP43146 1447 aa36.3■■■■□ 3.4
UFD1-204ENST00000447868 YTHDC2Q9H6S0 1430 aaKnown RBP36.29■■■■□ 3.4
UFD1-204ENST00000447868 STAC3Q96MF2 364 aa36.28■■■■□ 3.4
UFD1-204ENST00000447868 KNDC1Q76NI1 1749 aa36.27■■■■□ 3.4
UFD1-204ENST00000447868 ABCC11Q96J66 1382 aa36.27■■■■□ 3.4
UFD1-204ENST00000447868 TECPR2O15040 1411 aa36.26■■■■□ 3.4
UFD1-204ENST00000447868 SIN3AQ96ST3 1273 aa36.26■■■■□ 3.4
UFD1-204ENST00000447868 WAPLQ7Z5K2 1190 aa36.24■■■■□ 3.39
UFD1-204ENST00000447868 MST1RQ04912 1400 aa36.21■■■■□ 3.39
UFD1-204ENST00000447868 NEUROD1Q13562 356 aa36.21■■■■□ 3.39
UFD1-204ENST00000447868 PLEKHH1Q9ULM0 1364 aa36.19■■■■□ 3.38
UFD1-204ENST00000447868 ADGRB1O14514 1584 aa36.17■■■■□ 3.38
UFD1-204ENST00000447868 PHLPP1O60346 1717 aa36.16■■■■□ 3.38
UFD1-204ENST00000447868 BRINP3Q76B58 766 aa36.15■■■■□ 3.38
UFD1-204ENST00000447868 SIRT1Q96EB6 747 aa36.12■■■■□ 3.37
UFD1-204ENST00000447868 L3MBTL2Q969R5 705 aa36.11■■■■□ 3.37
UFD1-204ENST00000447868 TRAK1Q9UPV9 953 aa36.1■■■■□ 3.37
UFD1-204ENST00000447868 PRAM1Q96QH2 718 aa36.09■■■■□ 3.37
UFD1-204ENST00000447868 DISP3Q9P2K9 1392 aa36.09■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms