RNA–Protein interactions for RNA: ENST00000445853.5

FLOT1-206, Transcript of flotillin 1, humanhuman

TSL 1 (best)

Gene FLOT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-206ENST00000445853 TMEM131LA2VDJ0 1609 aa17.55■□□□□ 0.4
FLOT1-206ENST00000445853 ZNF326Q5BKZ1 582 aaKnown RBP17.55■□□□□ 0.4
FLOT1-206ENST00000445853 STAC3Q96MF2 364 aa17.55■□□□□ 0.4
FLOT1-206ENST00000445853 SPHKAPQ2M3C7 1700 aa17.55■□□□□ 0.4
FLOT1-206ENST00000445853 NEURL4Q96JN8 1562 aa17.54■□□□□ 0.4
FLOT1-206ENST00000445853 TBX22Q9Y458 520 aa17.54■□□□□ 0.4
FLOT1-206ENST00000445853 POLR1AO95602 1720 aaPredicted RBP17.54■□□□□ 0.4
FLOT1-206ENST00000445853 CPS1P31327 1500 aa17.52■□□□□ 0.4
FLOT1-206ENST00000445853 BCANQ96GW7 911 aa17.52■□□□□ 0.4
FLOT1-206ENST00000445853 PIK3R4Q99570 1358 aa17.52■□□□□ 0.39
FLOT1-206ENST00000445853 IQGAP1P46940 1657 aa17.51■□□□□ 0.39
FLOT1-206ENST00000445853 ZNF335Q9H4Z2 1342 aaPredicted RBP17.5■□□□□ 0.39
FLOT1-206ENST00000445853 KCNA6P17658 529 aa17.49■□□□□ 0.39
FLOT1-206ENST00000445853 FBXO41Q8TF61 875 aa17.49■□□□□ 0.39
FLOT1-206ENST00000445853 ANKRD30BQ9BXX2 1392 aa17.49■□□□□ 0.39
FLOT1-206ENST00000445853 FOXD1Q16676 465 aa17.48■□□□□ 0.39
FLOT1-206ENST00000445853 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
FLOT1-206ENST00000445853 CLTCL1P53675 1640 aa17.46■□□□□ 0.39
FLOT1-206ENST00000445853 DIP2AQ14689 1571 aa17.45■□□□□ 0.38
FLOT1-206ENST00000445853 SLC26A8Q96RN1 970 aa17.44■□□□□ 0.38
FLOT1-206ENST00000445853 SPATA31E1Q6ZUB1 1445 aa17.44■□□□□ 0.38
FLOT1-206ENST00000445853 NCOA3Q9Y6Q9 1424 aa17.41■□□□□ 0.38
FLOT1-206ENST00000445853 KIF1BO60333 1816 aa17.41■□□□□ 0.38
FLOT1-206ENST00000445853 TOM1O60784 492 aa17.4■□□□□ 0.38
FLOT1-206ENST00000445853 SETBP1Q9Y6X0 1596 aa17.4■□□□□ 0.38
FLOT1-206ENST00000445853 ADAMTS13Q76LX8 1427 aa17.39■□□□□ 0.38
FLOT1-206ENST00000445853 NKTRP30414 1462 aaKnown RBP17.39■□□□□ 0.37
FLOT1-206ENST00000445853 NEXMIFQ5QGS0 1516 aa17.39■□□□□ 0.37
FLOT1-206ENST00000445853 RGL3Q3MIN7 710 aa17.39■□□□□ 0.37
FLOT1-206ENST00000445853 NUTM2DQ5VT03 806 aaPredicted RBP17.38■□□□□ 0.37
FLOT1-206ENST00000445853 PROSER2Q86WR7 435 aaPredicted RBP17.36■□□□□ 0.37
FLOT1-206ENST00000445853 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
FLOT1-206ENST00000445853 AMOTL2Q9Y2J4 779 aa17.34■□□□□ 0.37
FLOT1-206ENST00000445853 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
FLOT1-206ENST00000445853 MYOM2P54296 1465 aa17.32■□□□□ 0.36
FLOT1-206ENST00000445853 UBAP1LF5GYI3 381 aa17.32■□□□□ 0.36
FLOT1-206ENST00000445853 MYO5BQ9ULV0 1848 aa17.32■□□□□ 0.36
FLOT1-206ENST00000445853 ILDR1Q86SU0 546 aaPredicted RBP17.31■□□□□ 0.36
FLOT1-206ENST00000445853 PRAG1Q86YV5 1406 aa17.3■□□□□ 0.36
FLOT1-206ENST00000445853 TMEM94Q12767 1356 aa17.3■□□□□ 0.36
FLOT1-206ENST00000445853 C14orf93Q9H972 538 aaKnown RBP17.3■□□□□ 0.36
FLOT1-206ENST00000445853 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
FLOT1-206ENST00000445853 MSH6P52701 1360 aa17.29■□□□□ 0.36
FLOT1-206ENST00000445853 ADGRF5Q8IZF2 1346 aa17.29■□□□□ 0.36
FLOT1-206ENST00000445853 SIRT1Q96EB6 747 aa17.29■□□□□ 0.36
FLOT1-206ENST00000445853 C19orf44Q9H6X5 657 aa17.29■□□□□ 0.36
FLOT1-206ENST00000445853 METP08581 1390 aa17.28■□□□□ 0.36
FLOT1-206ENST00000445853 DCAF11Q8TEB1 546 aa17.28■□□□□ 0.36
FLOT1-206ENST00000445853 NRXN1Q9ULB1 1477 aa17.28■□□□□ 0.36
FLOT1-206ENST00000445853 DHX57Q6P158 1386 aaKnown RBP17.28■□□□□ 0.36
FLOT1-206ENST00000445853 CADPS2Q86UW7 1296 aa17.27■□□□□ 0.36
FLOT1-206ENST00000445853 CLSPNQ9HAW4 1339 aa17.26■□□□□ 0.35
FLOT1-206ENST00000445853 PTCH1Q13635 1447 aa17.26■□□□□ 0.35
FLOT1-206ENST00000445853 PPLO60437 1756 aa17.25■□□□□ 0.35
FLOT1-206ENST00000445853 ALKQ9UM73 1620 aa17.25■□□□□ 0.35
FLOT1-206ENST00000445853 C14orf37Q86TY3 774 aa17.25■□□□□ 0.35
FLOT1-206ENST00000445853 ABCC11Q96J66 1382 aa17.25■□□□□ 0.35
FLOT1-206ENST00000445853 DCCP43146 1447 aa17.24■□□□□ 0.35
FLOT1-206ENST00000445853 LRPPRCP42704 1394 aaKnown RBP17.24■□□□□ 0.35
FLOT1-206ENST00000445853 NRXN3Q9Y4C0 1643 aa17.24■□□□□ 0.35
FLOT1-206ENST00000445853 CHD2O14647 1828 aaKnown RBP17.24■□□□□ 0.35
FLOT1-206ENST00000445853 ATF3P18847 181 aa17.23■□□□□ 0.35
FLOT1-206ENST00000445853 PTPRUQ92729 1446 aa17.22■□□□□ 0.35
FLOT1-206ENST00000445853 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
FLOT1-206ENST00000445853 TECPR2O15040 1411 aa17.21■□□□□ 0.35
FLOT1-206ENST00000445853 PCGF6Q9BYE7 350 aa17.21■□□□□ 0.35
FLOT1-206ENST00000445853 SLAIN2Q9P270 581 aa17.2■□□□□ 0.34
FLOT1-206ENST00000445853 KDM2AQ9Y2K7 1162 aa17.2■□□□□ 0.34
FLOT1-206ENST00000445853 FAM135BQ49AJ0 1406 aa17.2■□□□□ 0.34
FLOT1-206ENST00000445853 LAMC1P11047 1609 aa17.19■□□□□ 0.34
FLOT1-206ENST00000445853 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
FLOT1-206ENST00000445853 STRCP1A6NGW2 1772 aa17.19■□□□□ 0.34
FLOT1-206ENST00000445853 IFT172Q9UG01 1749 aa17.18■□□□□ 0.34
FLOT1-206ENST00000445853 CFAP70Q5T0N1 1121 aa17.18■□□□□ 0.34
FLOT1-206ENST00000445853 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
FLOT1-206ENST00000445853 YTHDC2Q9H6S0 1430 aaKnown RBP17.17■□□□□ 0.34
FLOT1-206ENST00000445853 PIP4K2BP78356 416 aa17.16■□□□□ 0.34
FLOT1-206ENST00000445853 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
FLOT1-206ENST00000445853 ADGRL3Q9HAR2 1447 aa17.15■□□□□ 0.34
FLOT1-206ENST00000445853 NEUROD1Q13562 356 aa17.15■□□□□ 0.34
FLOT1-206ENST00000445853 L3MBTL2Q969R5 705 aa17.15■□□□□ 0.34
FLOT1-206ENST00000445853 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
FLOT1-206ENST00000445853 TMEM132EQ6IEE7 984 aa17.14■□□□□ 0.33
FLOT1-206ENST00000445853 TONSLQ96HA7 1378 aa17.14■□□□□ 0.33
FLOT1-206ENST00000445853 SIN3AQ96ST3 1273 aa17.13■□□□□ 0.33
FLOT1-206ENST00000445853 STK26Q9P289 416 aa17.13■□□□□ 0.33
FLOT1-206ENST00000445853 RBM33Q96EV2 1170 aaKnown RBP17.12■□□□□ 0.33
FLOT1-206ENST00000445853 SETD1AO15047 1707 aaKnown RBP17.12■□□□□ 0.33
FLOT1-206ENST00000445853 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
FLOT1-206ENST00000445853 POGKQ9P215 609 aa17.1■□□□□ 0.33
FLOT1-206ENST00000445853 EIF3AQ14152 1382 aaKnown RBP17.08■□□□□ 0.32
FLOT1-206ENST00000445853 ADGRB1O14514 1584 aa17.07■□□□□ 0.32
FLOT1-206ENST00000445853 PRAM1Q96QH2 718 aa17.06■□□□□ 0.32
FLOT1-206ENST00000445853 KIAA1210Q9ULL0 1709 aa17.06■□□□□ 0.32
FLOT1-206ENST00000445853 XIRP1Q702N8 1843 aaKnown RBP17.05■□□□□ 0.32
FLOT1-206ENST00000445853 KNDC1Q76NI1 1749 aa17.05■□□□□ 0.32
FLOT1-206ENST00000445853 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
FLOT1-206ENST00000445853 HSPA1LP34931 641 aa17.05■□□□□ 0.32
FLOT1-206ENST00000445853 WAPLQ7Z5K2 1190 aa17.05■□□□□ 0.32
FLOT1-206ENST00000445853 TRAK1Q9UPV9 953 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms