RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 TOM1O60784 492 aa28.27■■■□□ 2.12
ATPAF2-201ENST00000444058 TRIM52Q96A61 297 aa28.27■■■□□ 2.12
ATPAF2-201ENST00000444058 MYO5BQ9ULV0 1848 aa28.27■■■□□ 2.12
ATPAF2-201ENST00000444058 PPP1R15AO75807 674 aaPredicted RBP28.25■■■□□ 2.11
ATPAF2-201ENST00000444058 SLC26A8Q96RN1 970 aa28.25■■■□□ 2.11
ATPAF2-201ENST00000444058 ACIN1Q9UKV3 1341 aaKnown RBP28.23■■■□□ 2.11
ATPAF2-201ENST00000444058 KCNA6P17658 529 aa28.23■■■□□ 2.11
ATPAF2-201ENST00000444058 TRPM2O94759 1503 aa28.23■■■□□ 2.11
ATPAF2-201ENST00000444058 SLC4A1APQ9BWU0 796 aaKnown RBP28.22■■■□□ 2.11
ATPAF2-201ENST00000444058 BCANQ96GW7 911 aa28.21■■■□□ 2.11
ATPAF2-201ENST00000444058 TBX22Q9Y458 520 aa28.19■■■□□ 2.1
ATPAF2-201ENST00000444058 NWD1Q149M9 1564 aa28.15■■■□□ 2.1
ATPAF2-201ENST00000444058 NKTRP30414 1462 aaKnown RBP28.15■■■□□ 2.1
ATPAF2-201ENST00000444058 CLTCL1P53675 1640 aa28.14■■■□□ 2.09
ATPAF2-201ENST00000444058 ADAMTS13Q76LX8 1427 aa28.13■■■□□ 2.09
ATPAF2-201ENST00000444058 PIK3R4Q99570 1358 aa28.11■■■□□ 2.09
ATPAF2-201ENST00000444058 DIP2AQ14689 1571 aa28.11■■■□□ 2.09
ATPAF2-201ENST00000444058 ALKQ9UM73 1620 aa28.11■■■□□ 2.09
ATPAF2-201ENST00000444058 NUTM2DQ5VT03 806 aaPredicted RBP28.11■■■□□ 2.09
ATPAF2-201ENST00000444058 SETD5Q9C0A6 1442 aa28.1■■■□□ 2.09
ATPAF2-201ENST00000444058 PIP4K2BP78356 416 aa28.1■■■□□ 2.09
ATPAF2-201ENST00000444058 ZNF326Q5BKZ1 582 aaKnown RBP28.1■■■□□ 2.09
ATPAF2-201ENST00000444058 TMEM94Q12767 1356 aa28.1■■■□□ 2.09
ATPAF2-201ENST00000444058 PROSER2Q86WR7 435 aaPredicted RBP28.08■■■□□ 2.09
ATPAF2-201ENST00000444058 MPHOSPH9Q99550 1183 aa28.08■■■□□ 2.09
ATPAF2-201ENST00000444058 SCAF1Q9H7N4 1312 aaKnown RBP28.07■■■□□ 2.08
ATPAF2-201ENST00000444058 CHD2O14647 1828 aaKnown RBP28.06■■■□□ 2.08
ATPAF2-201ENST00000444058 XIRP1Q702N8 1843 aaKnown RBP28.06■■■□□ 2.08
ATPAF2-201ENST00000444058 KIF1BO60333 1816 aa28.05■■■□□ 2.08
ATPAF2-201ENST00000444058 SENP3Q9H4L4 574 aaPredicted RBP28.05■■■□□ 2.08
ATPAF2-201ENST00000444058 SETBP1Q9Y6X0 1596 aa28.04■■■□□ 2.08
ATPAF2-201ENST00000444058 NEXMIFQ5QGS0 1516 aa28.03■■■□□ 2.08
ATPAF2-201ENST00000444058 RPGRIP1LQ68CZ1 1315 aa28.02■■■□□ 2.08
ATPAF2-201ENST00000444058 NCOA3Q9Y6Q9 1424 aa28.01■■■□□ 2.08
ATPAF2-201ENST00000444058 HSPA1LP34931 641 aa28■■■□□ 2.07
ATPAF2-201ENST00000444058 FOXD1Q16676 465 aa28■■■□□ 2.07
ATPAF2-201ENST00000444058 VGFO15240 615 aaPredicted RBP27.99■■■□□ 2.07
ATPAF2-201ENST00000444058 NRXN3Q9Y4C0 1643 aa27.99■■■□□ 2.07
ATPAF2-201ENST00000444058 CCDC144AA2RUR9 1427 aa27.98■■■□□ 2.07
ATPAF2-201ENST00000444058 RAB3GAP2Q9H2M9 1393 aa27.98■■■□□ 2.07
ATPAF2-201ENST00000444058 MSH6P52701 1360 aa27.96■■■□□ 2.07
ATPAF2-201ENST00000444058 RBM33Q96EV2 1170 aaKnown RBP27.95■■■□□ 2.06
ATPAF2-201ENST00000444058 HRCP23327 699 aa27.94■■■□□ 2.06
ATPAF2-201ENST00000444058 AMOTL2Q9Y2J4 779 aa27.94■■■□□ 2.06
ATPAF2-201ENST00000444058 FAM135BQ49AJ0 1406 aa27.93■■■□□ 2.06
ATPAF2-201ENST00000444058 PTPRUQ92729 1446 aa27.92■■■□□ 2.06
ATPAF2-201ENST00000444058 SPATA31E1Q6ZUB1 1445 aa27.9■■■□□ 2.06
ATPAF2-201ENST00000444058 METP08581 1390 aa27.89■■■□□ 2.06
ATPAF2-201ENST00000444058 C19orf44Q9H6X5 657 aa27.87■■■□□ 2.05
ATPAF2-201ENST00000444058 XRN1Q8IZH2 1706 aaKnown RBP27.87■■■□□ 2.05
ATPAF2-201ENST00000444058 DISP3Q9P2K9 1392 aa27.86■■■□□ 2.05
ATPAF2-201ENST00000444058 SLAIN2Q9P270 581 aa27.85■■■□□ 2.05
ATPAF2-201ENST00000444058 PPLO60437 1756 aa27.85■■■□□ 2.05
ATPAF2-201ENST00000444058 C14orf37Q86TY3 774 aa27.84■■■□□ 2.05
ATPAF2-201ENST00000444058 ANKRD30BQ9BXX2 1392 aa27.84■■■□□ 2.05
ATPAF2-201ENST00000444058 CADPS2Q86UW7 1296 aa27.82■■■□□ 2.04
ATPAF2-201ENST00000444058 RGL3Q3MIN7 710 aa27.8■■■□□ 2.04
ATPAF2-201ENST00000444058 DCCP43146 1447 aa27.78■■■□□ 2.04
ATPAF2-201ENST00000444058 PRAG1Q86YV5 1406 aa27.78■■■□□ 2.04
ATPAF2-201ENST00000444058 ATF3P18847 181 aa27.78■■■□□ 2.04
ATPAF2-201ENST00000444058 SETD1AO15047 1707 aaKnown RBP27.78■■■□□ 2.04
ATPAF2-201ENST00000444058 ROBO1Q9Y6N7 1651 aa27.78■■■□□ 2.04
ATPAF2-201ENST00000444058 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.76■■■□□ 2.03
ATPAF2-201ENST00000444058 ADGRF5Q8IZF2 1346 aa27.75■■■□□ 2.03
ATPAF2-201ENST00000444058 PTCH1Q13635 1447 aa27.75■■■□□ 2.03
ATPAF2-201ENST00000444058 IFT172Q9UG01 1749 aa27.74■■■□□ 2.03
ATPAF2-201ENST00000444058 ADGRL3Q9HAR2 1447 aa27.7■■■□□ 2.03
ATPAF2-201ENST00000444058 PIK3C2GO75747 1445 aa27.69■■■□□ 2.02
ATPAF2-201ENST00000444058 MED1Q15648 1581 aaPredicted RBP27.69■■■□□ 2.02
ATPAF2-201ENST00000444058 ROBO2Q9HCK4 1378 aa27.67■■■□□ 2.02
ATPAF2-201ENST00000444058 MYOM2P54296 1465 aa27.65■■■□□ 2.02
ATPAF2-201ENST00000444058 NRXN1Q9ULB1 1477 aa27.65■■■□□ 2.02
ATPAF2-201ENST00000444058 MST1RQ04912 1400 aa27.63■■■□□ 2.01
ATPAF2-201ENST00000444058 TECPR2O15040 1411 aa27.62■■■□□ 2.01
ATPAF2-201ENST00000444058 C14orf93Q9H972 538 aaKnown RBP27.62■■■□□ 2.01
ATPAF2-201ENST00000444058 LRPPRCP42704 1394 aaKnown RBP27.61■■■□□ 2.01
ATPAF2-201ENST00000444058 STAC3Q96MF2 364 aa27.61■■■□□ 2.01
ATPAF2-201ENST00000444058 ABCC11Q96J66 1382 aa27.6■■■□□ 2.01
ATPAF2-201ENST00000444058 BRINP3Q76B58 766 aa27.6■■■□□ 2.01
ATPAF2-201ENST00000444058 NALCNQ8IZF0 1738 aa27.6■■■□□ 2.01
ATPAF2-201ENST00000444058 ILDR2Q71H61 639 aa27.59■■■□□ 2.01
ATPAF2-201ENST00000444058 AHDC1Q5TGY3 1603 aaPredicted RBP27.59■■■□□ 2.01
ATPAF2-201ENST00000444058 PHLPP1O60346 1717 aa27.58■■■□□ 2.01
ATPAF2-201ENST00000444058 JCADQ9P266 1359 aa27.57■■■□□ 2
ATPAF2-201ENST00000444058 ASXL1Q8IXJ9 1541 aa27.57■■■□□ 2
ATPAF2-201ENST00000444058 COL16A1Q07092 1604 aaPredicted RBP27.56■■■□□ 2
ATPAF2-201ENST00000444058 TMEM132EQ6IEE7 984 aa27.55■■■□□ 2
ATPAF2-201ENST00000444058 SIRT1Q96EB6 747 aa27.55■■■□□ 2
ATPAF2-201ENST00000444058 LAMC1P11047 1609 aa27.55■■■□□ 2
ATPAF2-201ENST00000444058 YTHDC2Q9H6S0 1430 aaKnown RBP27.54■■■□□ 2
ATPAF2-201ENST00000444058 PHF23Q9BUL5 403 aaPredicted RBP27.53■■■□□ 2
ATPAF2-201ENST00000444058 CFAP70Q5T0N1 1121 aa27.52■■■□□ 2
ATPAF2-201ENST00000444058 STK26Q9P289 416 aa27.52■■■□□ 2
ATPAF2-201ENST00000444058 KNDC1Q76NI1 1749 aa27.52■■■□□ 2
ATPAF2-201ENST00000444058 C1orf167Q5SNV9 1468 aa27.51■■□□□ 1.99
ATPAF2-201ENST00000444058 DHX57Q6P158 1386 aaKnown RBP27.5■■□□□ 1.99
ATPAF2-201ENST00000444058 DCAF11Q8TEB1 546 aa27.49■■□□□ 1.99
ATPAF2-201ENST00000444058 CDC42BPGQ6DT37 1551 aa27.48■■□□□ 1.99
ATPAF2-201ENST00000444058 WAPLQ7Z5K2 1190 aa27.47■■□□□ 1.99
ATPAF2-201ENST00000444058 SPATA31A6Q5VVP1 1343 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms