RNA–Protein interactions for RNA: ENST00000443927.5

ITSN2-208, Transcript of intersectin 2, humanhuman

TSL 3

Gene ITSN2, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-208ENST00000443927 NWD1Q149M9 1564 aa29.62■■■□□ 2.33
ITSN2-208ENST00000443927 RIMS2Q9UQ26 1411 aa29.62■■■□□ 2.33
ITSN2-208ENST00000443927 HSPA1LP34931 641 aa29.61■■■□□ 2.33
ITSN2-208ENST00000443927 SLC26A8Q96RN1 970 aa29.6■■■□□ 2.33
ITSN2-208ENST00000443927 NKTRP30414 1462 aaKnown RBP29.56■■■□□ 2.32
ITSN2-208ENST00000443927 PLEKHG1Q9ULL1 1385 aa29.56■■■□□ 2.32
ITSN2-208ENST00000443927 PPP1R15AO75807 674 aaPredicted RBP29.56■■■□□ 2.32
ITSN2-208ENST00000443927 CHGAP10645 457 aaKnown RBP29.55■■■□□ 2.32
ITSN2-208ENST00000443927 BCANQ96GW7 911 aa29.55■■■□□ 2.32
ITSN2-208ENST00000443927 SENP3Q9H4L4 574 aaPredicted RBP29.55■■■□□ 2.32
ITSN2-208ENST00000443927 MED1Q15648 1581 aaPredicted RBP29.53■■■□□ 2.32
ITSN2-208ENST00000443927 NAIPQ13075 1403 aa29.53■■■□□ 2.32
ITSN2-208ENST00000443927 TMEM94Q12767 1356 aa29.52■■■□□ 2.32
ITSN2-208ENST00000443927 CHD2O14647 1828 aaKnown RBP29.52■■■□□ 2.32
ITSN2-208ENST00000443927 KCNA6P17658 529 aa29.51■■■□□ 2.31
ITSN2-208ENST00000443927 ILDR2Q71H61 639 aa29.5■■■□□ 2.31
ITSN2-208ENST00000443927 DIP2AQ14689 1571 aa29.49■■■□□ 2.31
ITSN2-208ENST00000443927 HDGFP51858 240 aaKnown RBP29.47■■■□□ 2.31
ITSN2-208ENST00000443927 CLTCL1P53675 1640 aa29.45■■■□□ 2.31
ITSN2-208ENST00000443927 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.45■■■□□ 2.31
ITSN2-208ENST00000443927 HFM1A2PYH4 1435 aa29.45■■■□□ 2.3
ITSN2-208ENST00000443927 PROSER2Q86WR7 435 aaPredicted RBP29.44■■■□□ 2.3
ITSN2-208ENST00000443927 TRPM2O94759 1503 aa29.44■■■□□ 2.3
ITSN2-208ENST00000443927 NUTM2DQ5VT03 806 aaPredicted RBP29.43■■■□□ 2.3
ITSN2-208ENST00000443927 RBM33Q96EV2 1170 aaKnown RBP29.42■■■□□ 2.3
ITSN2-208ENST00000443927 ADAMTS13Q76LX8 1427 aa29.42■■■□□ 2.3
ITSN2-208ENST00000443927 ROBO1Q9Y6N7 1651 aa29.4■■■□□ 2.3
ITSN2-208ENST00000443927 KIF1BO60333 1816 aa29.38■■■□□ 2.29
ITSN2-208ENST00000443927 NRXN3Q9Y4C0 1643 aa29.38■■■□□ 2.29
ITSN2-208ENST00000443927 TBX22Q9Y458 520 aa29.36■■■□□ 2.29
ITSN2-208ENST00000443927 MSH6P52701 1360 aa29.36■■■□□ 2.29
ITSN2-208ENST00000443927 SETBP1Q9Y6X0 1596 aa29.35■■■□□ 2.29
ITSN2-208ENST00000443927 FAM135BQ49AJ0 1406 aa29.34■■■□□ 2.29
ITSN2-208ENST00000443927 SOCS7O14512 581 aa29.33■■■□□ 2.29
ITSN2-208ENST00000443927 NEXMIFQ5QGS0 1516 aa29.32■■■□□ 2.28
ITSN2-208ENST00000443927 PIK3R4Q99570 1358 aa29.31■■■□□ 2.28
ITSN2-208ENST00000443927 ZNF326Q5BKZ1 582 aaKnown RBP29.3■■■□□ 2.28
ITSN2-208ENST00000443927 TRIM52Q96A61 297 aa29.3■■■□□ 2.28
ITSN2-208ENST00000443927 XRN1Q8IZH2 1706 aaKnown RBP29.3■■■□□ 2.28
ITSN2-208ENST00000443927 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.26■■■□□ 2.27
ITSN2-208ENST00000443927 PTPRUQ92729 1446 aa29.25■■■□□ 2.27
ITSN2-208ENST00000443927 NCOA3Q9Y6Q9 1424 aa29.24■■■□□ 2.27
ITSN2-208ENST00000443927 PHLPP1O60346 1717 aa29.23■■■□□ 2.27
ITSN2-208ENST00000443927 C14orf37Q86TY3 774 aa29.22■■■□□ 2.27
ITSN2-208ENST00000443927 SLC4A1APQ9BWU0 796 aaKnown RBP29.22■■■□□ 2.27
ITSN2-208ENST00000443927 PHF23Q9BUL5 403 aaPredicted RBP29.21■■■□□ 2.27
ITSN2-208ENST00000443927 SLAIN2Q9P270 581 aa29.18■■■□□ 2.26
ITSN2-208ENST00000443927 AMOTL2Q9Y2J4 779 aa29.18■■■□□ 2.26
ITSN2-208ENST00000443927 PPLO60437 1756 aa29.17■■■□□ 2.26
ITSN2-208ENST00000443927 SETD1AO15047 1707 aaKnown RBP29.17■■■□□ 2.26
ITSN2-208ENST00000443927 METP08581 1390 aa29.15■■■□□ 2.26
ITSN2-208ENST00000443927 COL16A1Q07092 1604 aaPredicted RBP29.13■■■□□ 2.25
ITSN2-208ENST00000443927 NALCNQ8IZF0 1738 aa29.11■■■□□ 2.25
ITSN2-208ENST00000443927 CADPS2Q86UW7 1296 aa29.1■■■□□ 2.25
ITSN2-208ENST00000443927 C19orf44Q9H6X5 657 aa29.1■■■□□ 2.25
ITSN2-208ENST00000443927 DCCP43146 1447 aa29.1■■■□□ 2.25
ITSN2-208ENST00000443927 ATF3P18847 181 aa29.09■■■□□ 2.25
ITSN2-208ENST00000443927 FOXD1Q16676 465 aa29.09■■■□□ 2.25
ITSN2-208ENST00000443927 AHDC1Q5TGY3 1603 aaPredicted RBP29.08■■■□□ 2.25
ITSN2-208ENST00000443927 CCDC144AA2RUR9 1427 aa29.06■■■□□ 2.24
ITSN2-208ENST00000443927 IFT172Q9UG01 1749 aa29.05■■■□□ 2.24
ITSN2-208ENST00000443927 ADGRL3Q9HAR2 1447 aa29.03■■■□□ 2.24
ITSN2-208ENST00000443927 VGFO15240 615 aaPredicted RBP29.03■■■□□ 2.24
ITSN2-208ENST00000443927 JCADQ9P266 1359 aa29.01■■■□□ 2.24
ITSN2-208ENST00000443927 RPGRIP1LQ68CZ1 1315 aa29.01■■■□□ 2.23
ITSN2-208ENST00000443927 PTCH1Q13635 1447 aa29.01■■■□□ 2.23
ITSN2-208ENST00000443927 ASXL1Q8IXJ9 1541 aa29■■■□□ 2.23
ITSN2-208ENST00000443927 SHPRHQ149N8 1683 aa28.99■■■□□ 2.23
ITSN2-208ENST00000443927 MPHOSPH9Q99550 1183 aa28.99■■■□□ 2.23
ITSN2-208ENST00000443927 MST1RQ04912 1400 aa28.99■■■□□ 2.23
ITSN2-208ENST00000443927 NHSL1Q5SYE7 1610 aa28.98■■■□□ 2.23
ITSN2-208ENST00000443927 SETD5Q9C0A6 1442 aa28.97■■■□□ 2.23
ITSN2-208ENST00000443927 SPATA31E1Q6ZUB1 1445 aa28.96■■■□□ 2.23
ITSN2-208ENST00000443927 PRAG1Q86YV5 1406 aa28.95■■■□□ 2.23
ITSN2-208ENST00000443927 BRINP3Q76B58 766 aa28.95■■■□□ 2.22
ITSN2-208ENST00000443927 RGS17Q9UGC6 210 aaPredicted RBP28.95■■■□□ 2.22
ITSN2-208ENST00000443927 ROBO2Q9HCK4 1378 aa28.93■■■□□ 2.22
ITSN2-208ENST00000443927 LRP6O75581 1613 aa28.91■■■□□ 2.22
ITSN2-208ENST00000443927 RGL3Q3MIN7 710 aa28.89■■■□□ 2.22
ITSN2-208ENST00000443927 RAB3GAP2Q9H2M9 1393 aa28.88■■■□□ 2.21
ITSN2-208ENST00000443927 ACIN1Q9UKV3 1341 aaKnown RBP28.88■■■□□ 2.21
ITSN2-208ENST00000443927 ANKRD30BQ9BXX2 1392 aa28.88■■■□□ 2.21
ITSN2-208ENST00000443927 ADGRF5Q8IZF2 1346 aa28.87■■■□□ 2.21
ITSN2-208ENST00000443927 KNDC1Q76NI1 1749 aa28.86■■■□□ 2.21
ITSN2-208ENST00000443927 SPATA31A6Q5VVP1 1343 aa28.85■■■□□ 2.21
ITSN2-208ENST00000443927 PIK3C2GO75747 1445 aa28.84■■■□□ 2.21
ITSN2-208ENST00000443927 C1orf167Q5SNV9 1468 aa28.83■■■□□ 2.21
ITSN2-208ENST00000443927 CDC42BPGQ6DT37 1551 aa28.83■■■□□ 2.21
ITSN2-208ENST00000443927 LAMC1P11047 1609 aa28.81■■■□□ 2.2
ITSN2-208ENST00000443927 POTEAQ6S8J7 498 aa28.81■■■□□ 2.2
ITSN2-208ENST00000443927 MEX3CQ5U5Q3 659 aaKnown RBP28.78■■■□□ 2.2
ITSN2-208ENST00000443927 TECPR2O15040 1411 aa28.77■■■□□ 2.2
ITSN2-208ENST00000443927 MYOM2P54296 1465 aa28.77■■■□□ 2.2
ITSN2-208ENST00000443927 DDX17Q92841 729 aaKnown RBP28.76■■■□□ 2.19
ITSN2-208ENST00000443927 LRPPRCP42704 1394 aaKnown RBP28.75■■■□□ 2.19
ITSN2-208ENST00000443927 NRXN1Q9ULB1 1477 aa28.73■■■□□ 2.19
ITSN2-208ENST00000443927 STK26Q9P289 416 aa28.73■■■□□ 2.19
ITSN2-208ENST00000443927 YTHDC2Q9H6S0 1430 aaKnown RBP28.7■■■□□ 2.19
ITSN2-208ENST00000443927 NUTM2BA6NNL0 878 aaPredicted RBP28.7■■■□□ 2.18
ITSN2-208ENST00000443927 NUTM2EB1AL46 878 aaPredicted RBP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms