RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 UBAP1LF5GYI3 381 aa19.6■□□□□ 0.73
TOM1-208ENST00000443206 SLC26A8Q96RN1 970 aa19.59■□□□□ 0.73
TOM1-208ENST00000443206 ZFYVE9O95405 1425 aa19.59■□□□□ 0.73
TOM1-208ENST00000443206 STRCP1A6NGW2 1772 aa19.58■□□□□ 0.73
TOM1-208ENST00000443206 ACIN1Q9UKV3 1341 aaKnown RBP19.57■□□□□ 0.72
TOM1-208ENST00000443206 PLEKHG1Q9ULL1 1385 aa19.56■□□□□ 0.72
TOM1-208ENST00000443206 TOM1O60784 492 aa19.55■□□□□ 0.72
TOM1-208ENST00000443206 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
TOM1-208ENST00000443206 NUTM2DQ5VT03 806 aaPredicted RBP19.55■□□□□ 0.72
TOM1-208ENST00000443206 SENP3Q9H4L4 574 aaPredicted RBP19.55■□□□□ 0.72
TOM1-208ENST00000443206 SETD5Q9C0A6 1442 aa19.54■□□□□ 0.72
TOM1-208ENST00000443206 KIF1BO60333 1816 aa19.54■□□□□ 0.72
TOM1-208ENST00000443206 TRPM2O94759 1503 aa19.54■□□□□ 0.72
TOM1-208ENST00000443206 LRRC7Q96NW7 1537 aa19.53■□□□□ 0.72
TOM1-208ENST00000443206 KCNA6P17658 529 aa19.53■□□□□ 0.72
TOM1-208ENST00000443206 CLTCL1P53675 1640 aa19.51■□□□□ 0.71
TOM1-208ENST00000443206 MPHOSPH9Q99550 1183 aa19.51■□□□□ 0.71
TOM1-208ENST00000443206 TBX22Q9Y458 520 aa19.5■□□□□ 0.71
TOM1-208ENST00000443206 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
TOM1-208ENST00000443206 PIP4K2BP78356 416 aa19.48■□□□□ 0.71
TOM1-208ENST00000443206 FOXD1Q16676 465 aa19.48■□□□□ 0.71
TOM1-208ENST00000443206 PROSER2Q86WR7 435 aaPredicted RBP19.48■□□□□ 0.71
TOM1-208ENST00000443206 CHD2O14647 1828 aaKnown RBP19.46■□□□□ 0.71
TOM1-208ENST00000443206 RAB3GAP2Q9H2M9 1393 aa19.45■□□□□ 0.7
TOM1-208ENST00000443206 XIRP1Q702N8 1843 aaKnown RBP19.44■□□□□ 0.7
TOM1-208ENST00000443206 DIP2AQ14689 1571 aa19.44■□□□□ 0.7
TOM1-208ENST00000443206 ADAMTS13Q76LX8 1427 aa19.43■□□□□ 0.7
TOM1-208ENST00000443206 TMEM94Q12767 1356 aa19.43■□□□□ 0.7
TOM1-208ENST00000443206 NKTRP30414 1462 aaKnown RBP19.42■□□□□ 0.7
TOM1-208ENST00000443206 NWD1Q149M9 1564 aa19.42■□□□□ 0.7
TOM1-208ENST00000443206 RPGRIP1LQ68CZ1 1315 aa19.42■□□□□ 0.7
TOM1-208ENST00000443206 PIK3R4Q99570 1358 aa19.42■□□□□ 0.7
TOM1-208ENST00000443206 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
TOM1-208ENST00000443206 VGFO15240 615 aaPredicted RBP19.41■□□□□ 0.7
TOM1-208ENST00000443206 NEXMIFQ5QGS0 1516 aa19.41■□□□□ 0.7
TOM1-208ENST00000443206 RBM33Q96EV2 1170 aaKnown RBP19.4■□□□□ 0.7
TOM1-208ENST00000443206 HRCP23327 699 aa19.38■□□□□ 0.69
TOM1-208ENST00000443206 SETBP1Q9Y6X0 1596 aa19.38■□□□□ 0.69
TOM1-208ENST00000443206 AMOTL2Q9Y2J4 779 aa19.37■□□□□ 0.69
TOM1-208ENST00000443206 ALKQ9UM73 1620 aa19.36■□□□□ 0.69
TOM1-208ENST00000443206 RGL3Q3MIN7 710 aa19.36■□□□□ 0.69
TOM1-208ENST00000443206 NRXN3Q9Y4C0 1643 aa19.36■□□□□ 0.69
TOM1-208ENST00000443206 MSH6P52701 1360 aa19.35■□□□□ 0.69
TOM1-208ENST00000443206 PPLO60437 1756 aa19.34■□□□□ 0.69
TOM1-208ENST00000443206 HSPA1LP34931 641 aa19.34■□□□□ 0.69
TOM1-208ENST00000443206 C14orf37Q86TY3 774 aa19.34■□□□□ 0.69
TOM1-208ENST00000443206 NCOA3Q9Y6Q9 1424 aa19.33■□□□□ 0.68
TOM1-208ENST00000443206 PTPRUQ92729 1446 aa19.32■□□□□ 0.68
TOM1-208ENST00000443206 METP08581 1390 aa19.31■□□□□ 0.68
TOM1-208ENST00000443206 SPATA31E1Q6ZUB1 1445 aa19.3■□□□□ 0.68
TOM1-208ENST00000443206 ANKRD30BQ9BXX2 1392 aa19.29■□□□□ 0.68
TOM1-208ENST00000443206 C19orf44Q9H6X5 657 aa19.28■□□□□ 0.68
TOM1-208ENST00000443206 FAM135BQ49AJ0 1406 aa19.27■□□□□ 0.68
TOM1-208ENST00000443206 SLAIN2Q9P270 581 aa19.27■□□□□ 0.68
TOM1-208ENST00000443206 XRN1Q8IZH2 1706 aaKnown RBP19.27■□□□□ 0.68
TOM1-208ENST00000443206 ATF3P18847 181 aa19.26■□□□□ 0.67
TOM1-208ENST00000443206 CADPS2Q86UW7 1296 aa19.26■□□□□ 0.67
TOM1-208ENST00000443206 ADGRF5Q8IZF2 1346 aa19.25■□□□□ 0.67
TOM1-208ENST00000443206 IFT172Q9UG01 1749 aa19.25■□□□□ 0.67
TOM1-208ENST00000443206 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.24■□□□□ 0.67
TOM1-208ENST00000443206 SETD1AO15047 1707 aaKnown RBP19.23■□□□□ 0.67
TOM1-208ENST00000443206 DISP3Q9P2K9 1392 aa19.23■□□□□ 0.67
TOM1-208ENST00000443206 ROBO1Q9Y6N7 1651 aa19.22■□□□□ 0.67
TOM1-208ENST00000443206 DCCP43146 1447 aa19.17■□□□□ 0.66
TOM1-208ENST00000443206 PIK3C2GO75747 1445 aa19.17■□□□□ 0.66
TOM1-208ENST00000443206 PTCH1Q13635 1447 aa19.17■□□□□ 0.66
TOM1-208ENST00000443206 STK26Q9P289 416 aa19.15■□□□□ 0.66
TOM1-208ENST00000443206 ROBO2Q9HCK4 1378 aa19.15■□□□□ 0.66
TOM1-208ENST00000443206 ADGRL3Q9HAR2 1447 aa19.15■□□□□ 0.66
TOM1-208ENST00000443206 TMEM132EQ6IEE7 984 aa19.14■□□□□ 0.65
TOM1-208ENST00000443206 MYOM2P54296 1465 aa19.14■□□□□ 0.65
TOM1-208ENST00000443206 DCAF11Q8TEB1 546 aa19.13■□□□□ 0.65
TOM1-208ENST00000443206 STAC3Q96MF2 364 aa19.13■□□□□ 0.65
TOM1-208ENST00000443206 C14orf93Q9H972 538 aaKnown RBP19.13■□□□□ 0.65
TOM1-208ENST00000443206 KDM2AQ9Y2K7 1162 aa19.13■□□□□ 0.65
TOM1-208ENST00000443206 PRAG1Q86YV5 1406 aa19.13■□□□□ 0.65
TOM1-208ENST00000443206 PHLPP1O60346 1717 aa19.13■□□□□ 0.65
TOM1-208ENST00000443206 NALCNQ8IZF0 1738 aa19.12■□□□□ 0.65
TOM1-208ENST00000443206 NRXN1Q9ULB1 1477 aa19.11■□□□□ 0.65
TOM1-208ENST00000443206 LRPPRCP42704 1394 aaKnown RBP19.11■□□□□ 0.65
TOM1-208ENST00000443206 CFAP70Q5T0N1 1121 aa19.11■□□□□ 0.65
TOM1-208ENST00000443206 ABCC11Q96J66 1382 aa19.1■□□□□ 0.65
TOM1-208ENST00000443206 LAMC1P11047 1609 aa19.1■□□□□ 0.65
TOM1-208ENST00000443206 MED1Q15648 1581 aaPredicted RBP19.1■□□□□ 0.65
TOM1-208ENST00000443206 MST1RQ04912 1400 aa19.09■□□□□ 0.65
TOM1-208ENST00000443206 DHX57Q6P158 1386 aaKnown RBP19.09■□□□□ 0.65
TOM1-208ENST00000443206 BRINP3Q76B58 766 aa19.09■□□□□ 0.65
TOM1-208ENST00000443206 TECPR2O15040 1411 aa19.08■□□□□ 0.64
TOM1-208ENST00000443206 YTHDC2Q9H6S0 1430 aaKnown RBP19.08■□□□□ 0.64
TOM1-208ENST00000443206 WAPLQ7Z5K2 1190 aa19.07■□□□□ 0.64
TOM1-208ENST00000443206 KNDC1Q76NI1 1749 aa19.07■□□□□ 0.64
TOM1-208ENST00000443206 ASXL1Q8IXJ9 1541 aa19.06■□□□□ 0.64
TOM1-208ENST00000443206 TRIM26Q12899 539 aaPredicted RBP19.06■□□□□ 0.64
TOM1-208ENST00000443206 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
TOM1-208ENST00000443206 SIRT1Q96EB6 747 aa19.05■□□□□ 0.64
TOM1-208ENST00000443206 AHDC1Q5TGY3 1603 aaPredicted RBP19.04■□□□□ 0.64
TOM1-208ENST00000443206 JCADQ9P266 1359 aa19.04■□□□□ 0.64
TOM1-208ENST00000443206 C1orf167Q5SNV9 1468 aa19.03■□□□□ 0.64
TOM1-208ENST00000443206 COL16A1Q07092 1604 aaPredicted RBP19.03■□□□□ 0.64
TOM1-208ENST00000443206 ILDR2Q71H61 639 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms