RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 NUTM2DQ5VT03 806 aaPredicted RBP16.82■□□□□ 0.28
PRKD3-203ENST00000443187 SLC26A8Q96RN1 970 aa16.82■□□□□ 0.28
PRKD3-203ENST00000443187 LRRC7Q96NW7 1537 aa16.81■□□□□ 0.28
PRKD3-203ENST00000443187 FOXD1Q16676 465 aa16.81■□□□□ 0.28
PRKD3-203ENST00000443187 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
PRKD3-203ENST00000443187 PLEKHG1Q9ULL1 1385 aa16.79■□□□□ 0.28
PRKD3-203ENST00000443187 ALKQ9UM73 1620 aa16.79■□□□□ 0.28
PRKD3-203ENST00000443187 SETD5Q9C0A6 1442 aa16.79■□□□□ 0.28
PRKD3-203ENST00000443187 UBAP1LF5GYI3 381 aa16.77■□□□□ 0.28
PRKD3-203ENST00000443187 ADAMTS13Q76LX8 1427 aa16.77■□□□□ 0.27
PRKD3-203ENST00000443187 XIRP1Q702N8 1843 aaKnown RBP16.76■□□□□ 0.27
PRKD3-203ENST00000443187 PPP1R15AO75807 674 aaPredicted RBP16.75■□□□□ 0.27
PRKD3-203ENST00000443187 MPHOSPH9Q99550 1183 aa16.75■□□□□ 0.27
PRKD3-203ENST00000443187 RAB3GAP2Q9H2M9 1393 aa16.75■□□□□ 0.27
PRKD3-203ENST00000443187 NWD1Q149M9 1564 aa16.73■□□□□ 0.27
PRKD3-203ENST00000443187 KCNA6P17658 529 aa16.73■□□□□ 0.27
PRKD3-203ENST00000443187 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.73■□□□□ 0.27
PRKD3-203ENST00000443187 BCANQ96GW7 911 aa16.73■□□□□ 0.27
PRKD3-203ENST00000443187 NEXMIFQ5QGS0 1516 aa16.73■□□□□ 0.27
PRKD3-203ENST00000443187 NRXN3Q9Y4C0 1643 aa16.73■□□□□ 0.27
PRKD3-203ENST00000443187 RBM33Q96EV2 1170 aaKnown RBP16.72■□□□□ 0.27
PRKD3-203ENST00000443187 KIF1BO60333 1816 aa16.71■□□□□ 0.27
PRKD3-203ENST00000443187 HDGFP51858 240 aaKnown RBP16.71■□□□□ 0.27
PRKD3-203ENST00000443187 TBX22Q9Y458 520 aa16.71■□□□□ 0.27
PRKD3-203ENST00000443187 ZNF326Q5BKZ1 582 aaKnown RBP16.7■□□□□ 0.26
PRKD3-203ENST00000443187 CHD2O14647 1828 aaKnown RBP16.7■□□□□ 0.26
PRKD3-203ENST00000443187 TMEM94Q12767 1356 aa16.69■□□□□ 0.26
PRKD3-203ENST00000443187 PIP4K2BP78356 416 aa16.68■□□□□ 0.26
PRKD3-203ENST00000443187 PTPRUQ92729 1446 aa16.68■□□□□ 0.26
PRKD3-203ENST00000443187 SETBP1Q9Y6X0 1596 aa16.68■□□□□ 0.26
PRKD3-203ENST00000443187 DIP2AQ14689 1571 aa16.67■□□□□ 0.26
PRKD3-203ENST00000443187 NKTRP30414 1462 aaKnown RBP16.67■□□□□ 0.26
PRKD3-203ENST00000443187 TOM1O60784 492 aa16.66■□□□□ 0.26
PRKD3-203ENST00000443187 PROSER2Q86WR7 435 aaPredicted RBP16.66■□□□□ 0.26
PRKD3-203ENST00000443187 SPATA31E1Q6ZUB1 1445 aa16.65■□□□□ 0.26
PRKD3-203ENST00000443187 METP08581 1390 aa16.64■□□□□ 0.26
PRKD3-203ENST00000443187 CCDC144AA2RUR9 1427 aa16.64■□□□□ 0.25
PRKD3-203ENST00000443187 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
PRKD3-203ENST00000443187 PPLO60437 1756 aa16.63■□□□□ 0.25
PRKD3-203ENST00000443187 HSPA1LP34931 641 aa16.62■□□□□ 0.25
PRKD3-203ENST00000443187 PIK3R4Q99570 1358 aa16.62■□□□□ 0.25
PRKD3-203ENST00000443187 AMOTL2Q9Y2J4 779 aa16.61■□□□□ 0.25
PRKD3-203ENST00000443187 SETD1AO15047 1707 aaKnown RBP16.61■□□□□ 0.25
PRKD3-203ENST00000443187 XRN1Q8IZH2 1706 aaKnown RBP16.61■□□□□ 0.25
PRKD3-203ENST00000443187 RGL3Q3MIN7 710 aa16.6■□□□□ 0.25
PRKD3-203ENST00000443187 RPGRIP1LQ68CZ1 1315 aa16.6■□□□□ 0.25
PRKD3-203ENST00000443187 HRCP23327 699 aa16.59■□□□□ 0.25
PRKD3-203ENST00000443187 ADGRF5Q8IZF2 1346 aa16.59■□□□□ 0.25
PRKD3-203ENST00000443187 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
PRKD3-203ENST00000443187 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
PRKD3-203ENST00000443187 VGFO15240 615 aaPredicted RBP16.58■□□□□ 0.24
PRKD3-203ENST00000443187 ANKRD30BQ9BXX2 1392 aa16.58■□□□□ 0.24
PRKD3-203ENST00000443187 MSH6P52701 1360 aa16.54■□□□□ 0.24
PRKD3-203ENST00000443187 NCOA3Q9Y6Q9 1424 aa16.53■□□□□ 0.24
PRKD3-203ENST00000443187 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.53■□□□□ 0.24
PRKD3-203ENST00000443187 FAM135BQ49AJ0 1406 aa16.53■□□□□ 0.24
PRKD3-203ENST00000443187 ASXL1Q8IXJ9 1541 aa16.52■□□□□ 0.24
PRKD3-203ENST00000443187 ROBO1Q9Y6N7 1651 aa16.51■□□□□ 0.23
PRKD3-203ENST00000443187 ROBO2Q9HCK4 1378 aa16.51■□□□□ 0.23
PRKD3-203ENST00000443187 SLAIN2Q9P270 581 aa16.5■□□□□ 0.23
PRKD3-203ENST00000443187 PIK3C2GO75747 1445 aa16.5■□□□□ 0.23
PRKD3-203ENST00000443187 NRXN1Q9ULB1 1477 aa16.49■□□□□ 0.23
PRKD3-203ENST00000443187 C14orf37Q86TY3 774 aa16.49■□□□□ 0.23
PRKD3-203ENST00000443187 C19orf44Q9H6X5 657 aa16.49■□□□□ 0.23
PRKD3-203ENST00000443187 PRAG1Q86YV5 1406 aa16.48■□□□□ 0.23
PRKD3-203ENST00000443187 NALCNQ8IZF0 1738 aa16.48■□□□□ 0.23
PRKD3-203ENST00000443187 PTCH1Q13635 1447 aa16.47■□□□□ 0.23
PRKD3-203ENST00000443187 MYOM2P54296 1465 aa16.47■□□□□ 0.23
PRKD3-203ENST00000443187 TMEM132EQ6IEE7 984 aa16.46■□□□□ 0.23
PRKD3-203ENST00000443187 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
PRKD3-203ENST00000443187 DHX57Q6P158 1386 aaKnown RBP16.45■□□□□ 0.22
PRKD3-203ENST00000443187 DISP3Q9P2K9 1392 aa16.45■□□□□ 0.22
PRKD3-203ENST00000443187 CADPS2Q86UW7 1296 aa16.44■□□□□ 0.22
PRKD3-203ENST00000443187 DCCP43146 1447 aa16.44■□□□□ 0.22
PRKD3-203ENST00000443187 MST1RQ04912 1400 aa16.44■□□□□ 0.22
PRKD3-203ENST00000443187 ATF3P18847 181 aa16.43■□□□□ 0.22
PRKD3-203ENST00000443187 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
PRKD3-203ENST00000443187 C14orf93Q9H972 538 aaKnown RBP16.43■□□□□ 0.22
PRKD3-203ENST00000443187 MED1Q15648 1581 aaPredicted RBP16.43■□□□□ 0.22
PRKD3-203ENST00000443187 LRPPRCP42704 1394 aaKnown RBP16.42■□□□□ 0.22
PRKD3-203ENST00000443187 STK26Q9P289 416 aa16.42■□□□□ 0.22
PRKD3-203ENST00000443187 TECPR2O15040 1411 aa16.42■□□□□ 0.22
PRKD3-203ENST00000443187 PLEKHH1Q9ULM0 1364 aa16.41■□□□□ 0.22
PRKD3-203ENST00000443187 YTHDC2Q9H6S0 1430 aaKnown RBP16.4■□□□□ 0.22
PRKD3-203ENST00000443187 BRINP3Q76B58 766 aa16.4■□□□□ 0.22
PRKD3-203ENST00000443187 WAPLQ7Z5K2 1190 aa16.4■□□□□ 0.22
PRKD3-203ENST00000443187 KDM2AQ9Y2K7 1162 aa16.4■□□□□ 0.22
PRKD3-203ENST00000443187 ABCC11Q96J66 1382 aa16.39■□□□□ 0.21
PRKD3-203ENST00000443187 PHLPP1O60346 1717 aa16.39■□□□□ 0.21
PRKD3-203ENST00000443187 COL16A1Q07092 1604 aaPredicted RBP16.39■□□□□ 0.21
PRKD3-203ENST00000443187 ILDR2Q71H61 639 aa16.39■□□□□ 0.21
PRKD3-203ENST00000443187 DCAF11Q8TEB1 546 aa16.39■□□□□ 0.21
PRKD3-203ENST00000443187 KNDC1Q76NI1 1749 aa16.39■□□□□ 0.21
PRKD3-203ENST00000443187 ADGRB1O14514 1584 aa16.38■□□□□ 0.21
PRKD3-203ENST00000443187 LAMC1P11047 1609 aa16.37■□□□□ 0.21
PRKD3-203ENST00000443187 AHDC1Q5TGY3 1603 aaPredicted RBP16.37■□□□□ 0.21
PRKD3-203ENST00000443187 C1orf167Q5SNV9 1468 aa16.36■□□□□ 0.21
PRKD3-203ENST00000443187 DDX17Q92841 729 aaKnown RBP16.35■□□□□ 0.21
PRKD3-203ENST00000443187 SIN3AQ96ST3 1273 aa16.34■□□□□ 0.21
PRKD3-203ENST00000443187 CDC42BPGQ6DT37 1551 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms